RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 SS18L1O75177 396 aaPredicted RBP8.37□□□□□ -1.07
ARHGEF39-201ENST00000378387 COX7A1P24310 79 aa8.37□□□□□ -1.07
ARHGEF39-201ENST00000378387 DLX1P56177 255 aa8.37□□□□□ -1.07
ARHGEF39-201ENST00000378387 NXT2Q9NPJ8 142 aaKnown RBP8.37□□□□□ -1.07
ARHGEF39-201ENST00000378387 TMEM262E9PQX1 116 aa8.36□□□□□ -1.07
ARHGEF39-201ENST00000378387 PIP4P2Q8N4L2 257 aa8.36□□□□□ -1.07
ARHGEF39-201ENST00000378387 PROCRQ9UNN8 238 aa8.36□□□□□ -1.07
ARHGEF39-201ENST00000378387 ZNF688P0C7X2 276 aa8.36□□□□□ -1.07
ARHGEF39-201ENST00000378387 FAM90A1Q86YD7 464 aa8.36□□□□□ -1.07
ARHGEF39-201ENST00000378387 GAS8-AS1O95177 125 aa8.36□□□□□ -1.07
ARHGEF39-201ENST00000378387 MGPP08493 103 aa8.36□□□□□ -1.07
ARHGEF39-201ENST00000378387 S100A4P26447 101 aaKnown RBP8.36□□□□□ -1.07
ARHGEF39-201ENST00000378387 TRANK1O15050 2925 aa8.35□□□□□ -1.07
ARHGEF39-201ENST00000378387 IGKV1D-37A0A075B6S9 117 aa8.35□□□□□ -1.07
ARHGEF39-201ENST00000378387 TMEM78Q5T7P6 136 aa8.35□□□□□ -1.07
ARHGEF39-201ENST00000378387 REV3LO60673 3130 aa8.35□□□□□ -1.07
ARHGEF39-201ENST00000378387 CCDC179H3BU77 68 aa8.35□□□□□ -1.07
ARHGEF39-201ENST00000378387 PRSS2P07478 247 aa8.35□□□□□ -1.07
ARHGEF39-201ENST00000378387 GP9P14770 177 aa8.35□□□□□ -1.07
ARHGEF39-201ENST00000378387 MEIG1Q5JSS6 88 aa8.35□□□□□ -1.07
ARHGEF39-201ENST00000378387 TMEM170BQ5T4T1 132 aa8.35□□□□□ -1.07
ARHGEF39-201ENST00000378387 RUSC1-AS1Q66K80 236 aa8.35□□□□□ -1.07
ARHGEF39-201ENST00000378387 NFE4Q86UQ8 179 aa8.35□□□□□ -1.07
ARHGEF39-201ENST00000378387 KLHL30-AS1Q8NEE0 82 aa8.35□□□□□ -1.07
ARHGEF39-201ENST00000378387 HIGD1BQ9P298 99 aa8.35□□□□□ -1.07
ARHGEF39-201ENST00000378387 LTBP2Q14767 1821 aa8.34□□□□□ -1.07
ARHGEF39-201ENST00000378387 IGHV3-66A0A0C4DH42 116 aa8.34□□□□□ -1.07
ARHGEF39-201ENST00000378387 SLC25A16P16260 332 aa8.34□□□□□ -1.07
ARHGEF39-201ENST00000378387 SRSF6Q13247 344 aaKnown RBP8.34□□□□□ -1.07
ARHGEF39-201ENST00000378387 C5orf64Q2M2E5 130 aa8.34□□□□□ -1.07
ARHGEF39-201ENST00000378387 TM2D2Q9BX73 214 aa8.34□□□□□ -1.07
ARHGEF39-201ENST00000378387 IFITM1P13164 125 aa8.34□□□□□ -1.07
ARHGEF39-201ENST00000378387 CCL11P51671 97 aa8.34□□□□□ -1.07
ARHGEF39-201ENST00000378387 ATP1A1-AS1Q5TC04 95 aa8.34□□□□□ -1.07
ARHGEF39-201ENST00000378387 NCKAP5O14513 1909 aa8.34□□□□□ -1.07
ARHGEF39-201ENST00000378387 IGHV3-49A0A0A0MS15 119 aa8.34□□□□□ -1.08
ARHGEF39-201ENST00000378387 LRP4O75096 1905 aa8.33□□□□□ -1.08
ARHGEF39-201ENST00000378387 MYMXA0A1B0GTQ4 84 aa8.33□□□□□ -1.08
ARHGEF39-201ENST00000378387 C16orf97H3BN30 126 aa8.33□□□□□ -1.08
ARHGEF39-201ENST00000378387 SPRY2O43597 315 aa8.33□□□□□ -1.08
ARHGEF39-201ENST00000378387 CNTFRP26992 372 aa8.33□□□□□ -1.08
ARHGEF39-201ENST00000378387 RPL32P62910 135 aaKnown RBP8.33□□□□□ -1.08
ARHGEF39-201ENST00000378387 PPP1R27Q86WC6 154 aa8.33□□□□□ -1.08
ARHGEF39-201ENST00000378387 TEN1Q86WV5 123 aa8.33□□□□□ -1.08
ARHGEF39-201ENST00000378387 SAP25Q8TEE9 199 aa8.33□□□□□ -1.08
ARHGEF39-201ENST00000378387 TRGV9Q99603 122 aa8.33□□□□□ -1.08
ARHGEF39-201ENST00000378387 CDIP1Q9H305 208 aa8.33□□□□□ -1.08
ARHGEF39-201ENST00000378387 ADAMTS20P59510 1910 aa8.33□□□□□ -1.08
ARHGEF39-201ENST00000378387 M0R381 172 aa8.33□□□□□ -1.08
ARHGEF39-201ENST00000378387 EGR2P11161 476 aaPredicted RBP8.33□□□□□ -1.08
ARHGEF39-201ENST00000378387 LAGE3Q14657 143 aa8.33□□□□□ -1.08
ARHGEF39-201ENST00000378387 FAM159AQ6UWV7 190 aa8.33□□□□□ -1.08
ARHGEF39-201ENST00000378387 ANKRD29Q8N6D5 301 aa8.33□□□□□ -1.08
ARHGEF39-201ENST00000378387 IGHV3-64A0A075B6Q5 118 aa8.33□□□□□ -1.08
ARHGEF39-201ENST00000378387 NDUFB3O43676 98 aa8.33□□□□□ -1.08
ARHGEF39-201ENST00000378387 CRIP1P50238 77 aa8.33□□□□□ -1.08
ARHGEF39-201ENST00000378387 CR1LQ2VPA4 569 aa8.33□□□□□ -1.08
ARHGEF39-201ENST00000378387 PSMG4Q5JS54 123 aa8.33□□□□□ -1.08
ARHGEF39-201ENST00000378387 SMRP1Q8NCR6 262 aa8.33□□□□□ -1.08
ARHGEF39-201ENST00000378387 TRBV19A0A075B6N1 114 aa8.32□□□□□ -1.08
ARHGEF39-201ENST00000378387 MYCNOSP40205 109 aa8.32□□□□□ -1.08
ARHGEF39-201ENST00000378387 Q6ZT83 130 aa8.32□□□□□ -1.08
ARHGEF39-201ENST00000378387 NTN5Q8WTR8 489 aaPredicted RBP8.32□□□□□ -1.08
ARHGEF39-201ENST00000378387 PRADC1Q9BSG0 188 aa8.32□□□□□ -1.08
ARHGEF39-201ENST00000378387 LINC01548A6NM66 108 aa8.32□□□□□ -1.08
ARHGEF39-201ENST00000378387 HERVK_113P61574 105 aa8.32□□□□□ -1.08
ARHGEF39-201ENST00000378387 TMEM167AQ8TBQ9 72 aa8.32□□□□□ -1.08
ARHGEF39-201ENST00000378387 RNF125Q96EQ8 232 aa8.32□□□□□ -1.08
ARHGEF39-201ENST00000378387 RITA1Q96K30 269 aa8.32□□□□□ -1.08
ARHGEF39-201ENST00000378387 HHLA3Q9XRX5 114 aa8.32□□□□□ -1.08
ARHGEF39-201ENST00000378387 LTBRP36941 435 aa8.32□□□□□ -1.08
ARHGEF39-201ENST00000378387 SPRR3Q9UBC9 169 aa8.32□□□□□ -1.08
ARHGEF39-201ENST00000378387 LINC00312Q9Y6C7 94 aa8.32□□□□□ -1.08
ARHGEF39-201ENST00000378387 UBTD1Q9HAC8 227 aa8.31□□□□□ -1.08
ARHGEF39-201ENST00000378387 SIT1Q9Y3P8 196 aa8.31□□□□□ -1.08
ARHGEF39-201ENST00000378387 TRAV8-4A0A0B4J246 113 aa8.31□□□□□ -1.08
ARHGEF39-201ENST00000378387 LAMTOR5O43504 91 aa8.31□□□□□ -1.08
ARHGEF39-201ENST00000378387 SLC25A20O43772 301 aa8.31□□□□□ -1.08
ARHGEF39-201ENST00000378387 HLA-DMBP28068 263 aa8.31□□□□□ -1.08
ARHGEF39-201ENST00000378387 ERCC8Q13216 396 aa8.31□□□□□ -1.08
ARHGEF39-201ENST00000378387 POU2AF1Q16633 256 aa8.31□□□□□ -1.08
ARHGEF39-201ENST00000378387 OR11H6Q8NGC7 330 aa8.31□□□□□ -1.08
ARHGEF39-201ENST00000378387 PHLDA1Q8WV24 401 aaPredicted RBP8.31□□□□□ -1.08
ARHGEF39-201ENST00000378387 VCX2Q9H322 139 aa8.31□□□□□ -1.08
ARHGEF39-201ENST00000378387 C2CD3Q4AC94 2353 aa8.31□□□□□ -1.08
ARHGEF39-201ENST00000378387 WI2-2373I1.2A0A1W2PRP0 233 aa8.31□□□□□ -1.08
ARHGEF39-201ENST00000378387 F5H697 171 aa8.31□□□□□ -1.08
ARHGEF39-201ENST00000378387 H7C1H1 209 aa8.31□□□□□ -1.08
ARHGEF39-201ENST00000378387 SRSF1Q07955 248 aaKnown RBP eCLIP8.31□□□□□ -1.08
ARHGEF39-201ENST00000378387 DTX2Q86UW9 622 aa8.31□□□□□ -1.08
ARHGEF39-201ENST00000378387 TRAV2A0A0B4J234 112 aa8.3□□□□□ -1.08
ARHGEF39-201ENST00000378387 TRAV4A0A0B4J268 109 aa8.3□□□□□ -1.08
ARHGEF39-201ENST00000378387 FABP5P3A8MUU1 101 aa8.3□□□□□ -1.08
ARHGEF39-201ENST00000378387 PLNP26678 52 aa8.3□□□□□ -1.08
ARHGEF39-201ENST00000378387 ARHGAP32A7KAX9 2087 aa8.3□□□□□ -1.08
ARHGEF39-201ENST00000378387 IGHV1-18A0A0C4DH31 117 aa8.3□□□□□ -1.08
ARHGEF39-201ENST00000378387 NDUFV3P56181 108 aaKnown RBP8.3□□□□□ -1.08
ARHGEF39-201ENST00000378387 CFAP126Q5VTH2 177 aa8.3□□□□□ -1.08
ARHGEF39-201ENST00000378387 THAP8Q8NA92 274 aa8.3□□□□□ -1.08
ARHGEF39-201ENST00000378387 C15orf53Q8NAA6 179 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms