RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 PPP1R27Q86WC6 154 aa11.64□□□□□ -0.55
CLCN1-201ENST00000343257 SPATA25Q9BR10 227 aa11.64□□□□□ -0.55
CLCN1-201ENST00000343257 I3L2K1 104 aa11.63□□□□□ -0.55
CLCN1-201ENST00000343257 ERCC8Q13216 396 aa11.63□□□□□ -0.55
CLCN1-201ENST00000343257 TTC9CQ8N5M4 171 aa11.63□□□□□ -0.55
CLCN1-201ENST00000343257 ZNF491Q8N8L2 437 aa11.63□□□□□ -0.55
CLCN1-201ENST00000343257 RNF185Q96GF1 192 aa11.63□□□□□ -0.55
CLCN1-201ENST00000343257 H3BRN7 92 aa11.63□□□□□ -0.55
CLCN1-201ENST00000343257 IGHG3P01860 377 aa11.63□□□□□ -0.55
CLCN1-201ENST00000343257 MT-ATP8P03928 68 aa11.63□□□□□ -0.55
CLCN1-201ENST00000343257 GATA3P23771 443 aa11.63□□□□□ -0.55
CLCN1-201ENST00000343257 DEFB104AQ8WTQ1 72 aa11.63□□□□□ -0.55
CLCN1-201ENST00000343257 HIGD1BQ9P298 99 aa11.63□□□□□ -0.55
CLCN1-201ENST00000343257 CTSZQ9UBR2 303 aa11.63□□□□□ -0.55
CLCN1-201ENST00000343257 LOC107984156A0A0G2JMH3 177 aa11.63□□□□□ -0.55
CLCN1-201ENST00000343257 MC5RP33032 325 aa11.63□□□□□ -0.55
CLCN1-201ENST00000343257 ARL17AQ8IVW1 177 aa11.63□□□□□ -0.55
CLCN1-201ENST00000343257 TM2D2Q9BX73 214 aa11.63□□□□□ -0.55
CLCN1-201ENST00000343257 SPINK8P0C7L1 97 aa11.62□□□□□ -0.55
CLCN1-201ENST00000343257 UFC1Q9Y3C8 167 aa11.62□□□□□ -0.55
CLCN1-201ENST00000343257 LINC01548A6NM66 108 aa11.62□□□□□ -0.55
CLCN1-201ENST00000343257 SPRY2O43597 315 aa11.62□□□□□ -0.55
CLCN1-201ENST00000343257 PRR25Q96S07 402 aa11.61□□□□□ -0.55
CLCN1-201ENST00000343257 MED13LQ71F56 2210 aa11.61□□□□□ -0.55
CLCN1-201ENST00000343257 TECTAO75443 2155 aa11.61□□□□□ -0.55
CLCN1-201ENST00000343257 PSMB2P49721 201 aa11.61□□□□□ -0.55
CLCN1-201ENST00000343257 RRN3P1Q2M238 152 aa11.61□□□□□ -0.55
CLCN1-201ENST00000343257 TEX36Q5VZQ5 186 aa11.61□□□□□ -0.55
CLCN1-201ENST00000343257 TRGV3P03979 118 aa11.61□□□□□ -0.55
CLCN1-201ENST00000343257 MRAP2Q96G30 205 aa11.61□□□□□ -0.55
CLCN1-201ENST00000343257 PGPEP1Q9NXJ5 209 aa11.61□□□□□ -0.55
CLCN1-201ENST00000343257 K7EIM0 57 aa11.6□□□□□ -0.55
CLCN1-201ENST00000343257 IGHV1-8P0DP01 117 aa11.6□□□□□ -0.55
CLCN1-201ENST00000343257 RPEQ96AT9 228 aa11.6□□□□□ -0.55
CLCN1-201ENST00000343257 SRSF8Q9BRL6 282 aaKnown RBP11.6□□□□□ -0.55
CLCN1-201ENST00000343257 CACNA1HO95180 2353 aa11.6□□□□□ -0.55
CLCN1-201ENST00000343257 MYOZ3Q8TDC0 251 aa11.6□□□□□ -0.55
CLCN1-201ENST00000343257 ZMAT4Q9H898 229 aa11.6□□□□□ -0.55
CLCN1-201ENST00000343257 SVEP1Q4LDE5 3571 aa11.6□□□□□ -0.55
CLCN1-201ENST00000343257 IGHV3OR16-13A0A075B7E8 117 aa11.59□□□□□ -0.55
CLCN1-201ENST00000343257 IGHV3-74A0A0B4J1X5 117 aa11.59□□□□□ -0.55
CLCN1-201ENST00000343257 CD40P25942 277 aa11.59□□□□□ -0.55
CLCN1-201ENST00000343257 LOXP28300 417 aaPredicted RBP11.59□□□□□ -0.55
CLCN1-201ENST00000343257 TMEM30BQ3MIR4 351 aa11.59□□□□□ -0.55
CLCN1-201ENST00000343257 MRPL16Q9NX20 251 aaKnown RBP11.59□□□□□ -0.55
CLCN1-201ENST00000343257 PRO0461Q9UI25 63 aa11.59□□□□□ -0.55
CLCN1-201ENST00000343257 C8orf86Q6ZUL3 223 aa11.59□□□□□ -0.55
CLCN1-201ENST00000343257 DTX2Q86UW9 622 aa11.59□□□□□ -0.55
CLCN1-201ENST00000343257 IGHV3-66A0A0C4DH42 116 aa11.59□□□□□ -0.55
CLCN1-201ENST00000343257 TRBV6-1A0A0K0K1D8 114 aa11.59□□□□□ -0.55
CLCN1-201ENST00000343257 K7EM74 188 aa11.59□□□□□ -0.55
CLCN1-201ENST00000343257 NFE4Q86UQ8 179 aa11.59□□□□□ -0.55
CLCN1-201ENST00000343257 IGHV1-3A0A0C4DH29 117 aa11.58□□□□□ -0.56
CLCN1-201ENST00000343257 LYNX1G3V0Z9 82 aa11.58□□□□□ -0.56
CLCN1-201ENST00000343257 LYNX1P0DP58 116 aa11.58□□□□□ -0.56
CLCN1-201ENST00000343257 ZFP2Q6ZN57 461 aa11.58□□□□□ -0.56
CLCN1-201ENST00000343257 ARHGAP32A7KAX9 2087 aa11.58□□□□□ -0.56
CLCN1-201ENST00000343257 MRPS12O15235 138 aaKnown RBP11.58□□□□□ -0.56
CLCN1-201ENST00000343257 FHL3Q13643 280 aa11.58□□□□□ -0.56
CLCN1-201ENST00000343257 SS18L2Q9UHA2 77 aa11.58□□□□□ -0.56
CLCN1-201ENST00000343257 EP300Q09472 2414 aaPredicted RBP11.57□□□□□ -0.56
CLCN1-201ENST00000343257 NCBP2LA6PVI3 153 aaKnown RBP11.57□□□□□ -0.56
CLCN1-201ENST00000343257 H3BVH4 76 aa11.57□□□□□ -0.56
CLCN1-201ENST00000343257 HLA-DRB4P13762 266 aa11.57□□□□□ -0.56
CLCN1-201ENST00000343257 FOXI1Q12951 378 aa11.57□□□□□ -0.56
CLCN1-201ENST00000343257 Q6ZQT7 251 aa11.57□□□□□ -0.56
CLCN1-201ENST00000343257 RNF183Q96D59 192 aa11.57□□□□□ -0.56
CLCN1-201ENST00000343257 HLA-DRB4X5D2U9 266 aa11.57□□□□□ -0.56
CLCN1-201ENST00000343257 LINC01549A6NIU2 74 aa11.57□□□□□ -0.56
CLCN1-201ENST00000343257 C17orf100A8MU93 164 aa11.57□□□□□ -0.56
CLCN1-201ENST00000343257 J3KRW8 73 aa11.57□□□□□ -0.56
CLCN1-201ENST00000343257 ANXA2RQ3ZCQ2 193 aa11.57□□□□□ -0.56
CLCN1-201ENST00000343257 GFRALQ6UXV0 394 aa11.57□□□□□ -0.56
CLCN1-201ENST00000343257 RNF182Q8N6D2 247 aa11.57□□□□□ -0.56
CLCN1-201ENST00000343257 NXT2Q9NPJ8 142 aaKnown RBP11.57□□□□□ -0.56
CLCN1-201ENST00000343257 PRAC2D3DTV9 90 aa11.57□□□□□ -0.56
CLCN1-201ENST00000343257 HOXA3O43365 443 aaPredicted RBP11.57□□□□□ -0.56
CLCN1-201ENST00000343257 SMCPP49901 116 aaPredicted RBP11.57□□□□□ -0.56
CLCN1-201ENST00000343257 CDIP1Q9H305 208 aa11.57□□□□□ -0.56
CLCN1-201ENST00000343257 TMEM178BH3BS89 294 aa11.56□□□□□ -0.56
CLCN1-201ENST00000343257 ATP5LO75964 103 aa11.56□□□□□ -0.56
CLCN1-201ENST00000343257 CRYGBP07316 175 aa11.56□□□□□ -0.56
CLCN1-201ENST00000343257 XGP55808 180 aa11.56□□□□□ -0.56
CLCN1-201ENST00000343257 ZNF575Q86XF7 245 aa11.56□□□□□ -0.56
CLCN1-201ENST00000343257 ZNF502Q8TBZ5 544 aa11.56□□□□□ -0.56
CLCN1-201ENST00000343257 IGLC6P0CF74 106 aa11.56□□□□□ -0.56
CLCN1-201ENST00000343257 LYPD1Q8N2G4 141 aa11.56□□□□□ -0.56
CLCN1-201ENST00000343257 MORN3Q6PF18 240 aaPredicted RBP11.55□□□□□ -0.56
CLCN1-201ENST00000343257 C1orf210Q8IVY1 113 aa11.55□□□□□ -0.56
CLCN1-201ENST00000343257 HES1Q14469 280 aa11.55□□□□□ -0.56
CLCN1-201ENST00000343257 DEFB109BQ30KR1 87 aa11.55□□□□□ -0.56
CLCN1-201ENST00000343257 PVRIGQ6DKI7 326 aa11.55□□□□□ -0.56
CLCN1-201ENST00000343257 IGHV3-49A0A0A0MS15 119 aa11.55□□□□□ -0.56
CLCN1-201ENST00000343257 TRAV17A0A0B4J275 112 aa11.55□□□□□ -0.56
CLCN1-201ENST00000343257 OR11H12B2RN74 326 aa11.55□□□□□ -0.56
CLCN1-201ENST00000343257 ADIPOQQ15848 244 aa11.55□□□□□ -0.56
CLCN1-201ENST00000343257 TCTEX1D4Q5JR98 221 aa11.55□□□□□ -0.56
CLCN1-201ENST00000343257 DYNAPQ8N1N2 210 aa11.55□□□□□ -0.56
CLCN1-201ENST00000343257 LINC00311Q8N616 119 aa11.55□□□□□ -0.56
CLCN1-201ENST00000343257 OR11H1Q8NG94 326 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms