RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 TCF15Q12870 199 aa12.85□□□□□ -0.35
ZNF541-201ENST00000263351 OCIAD2Q56VL3 154 aa12.85□□□□□ -0.35
ZNF541-201ENST00000263351 ORMDL3Q8N138 153 aa12.85□□□□□ -0.35
ZNF541-201ENST00000263351 GAGE12BA1L429 117 aa12.84□□□□□ -0.35
ZNF541-201ENST00000263351 VPS25Q9BRG1 176 aa12.84□□□□□ -0.35
ZNF541-201ENST00000263351 C21orf62Q9NYP8 219 aa12.84□□□□□ -0.35
ZNF541-201ENST00000263351 LINC01548A6NM66 108 aa12.84□□□□□ -0.35
ZNF541-201ENST00000263351 CD5LO43866 347 aa12.84□□□□□ -0.35
ZNF541-201ENST00000263351 PAX8Q06710 450 aa12.84□□□□□ -0.35
ZNF541-201ENST00000263351 MS4A6AQ9H2W1 248 aa12.84□□□□□ -0.35
ZNF541-201ENST00000263351 TRAV26-2A0A0B4J265 109 aa12.83□□□□□ -0.35
ZNF541-201ENST00000263351 CTSGP08311 255 aa12.83□□□□□ -0.35
ZNF541-201ENST00000263351 ZNF493Q6ZR52 646 aa12.83□□□□□ -0.35
ZNF541-201ENST00000263351 ARPC1AQ92747 370 aa12.83□□□□□ -0.35
ZNF541-201ENST00000263351 HIVEP3Q5T1R4 2406 aa12.83□□□□□ -0.36
ZNF541-201ENST00000263351 FER1L6-AS1Q8NA97 138 aa12.83□□□□□ -0.36
ZNF541-201ENST00000263351 MFAP4P55083 255 aa12.82□□□□□ -0.36
ZNF541-201ENST00000263351 IL17RELQ6ZVW7 336 aa12.82□□□□□ -0.36
ZNF541-201ENST00000263351 RNF185Q96GF1 192 aa12.82□□□□□ -0.36
ZNF541-201ENST00000263351 SPG11Q96JI7 2443 aa12.82□□□□□ -0.36
ZNF541-201ENST00000263351 TRBV6-1A0A0K0K1D8 114 aa12.82□□□□□ -0.36
ZNF541-201ENST00000263351 TRGV3P03979 118 aa12.82□□□□□ -0.36
ZNF541-201ENST00000263351 ECSCRQ19T08 205 aa12.82□□□□□ -0.36
ZNF541-201ENST00000263351 IFI27L1Q96BM0 104 aa12.82□□□□□ -0.36
ZNF541-201ENST00000263351 C11orf21Q9P2W6 132 aa12.82□□□□□ -0.36
ZNF541-201ENST00000263351 J3KRW8 73 aa12.81□□□□□ -0.36
ZNF541-201ENST00000263351 ZFP36P26651 326 aaKnown RBP12.81□□□□□ -0.36
ZNF541-201ENST00000263351 GATD1Q8NB37 220 aa12.81□□□□□ -0.36
ZNF541-201ENST00000263351 U3KQK5 164 aa12.81□□□□□ -0.36
ZNF541-201ENST00000263351 K7ERJ3 54 aa12.81□□□□□ -0.36
ZNF541-201ENST00000263351 CCL21O00585 134 aa12.81□□□□□ -0.36
ZNF541-201ENST00000263351 HBDP02042 147 aa12.81□□□□□ -0.36
ZNF541-201ENST00000263351 RIPPLY3P57055 190 aa12.81□□□□□ -0.36
ZNF541-201ENST00000263351 DEFB1P60022 68 aa12.81□□□□□ -0.36
ZNF541-201ENST00000263351 NDUFA3O95167 84 aa12.8□□□□□ -0.36
ZNF541-201ENST00000263351 KIR3DS1Q14943 382 aa12.8□□□□□ -0.36
ZNF541-201ENST00000263351 G3V318 75 aa12.8□□□□□ -0.36
ZNF541-201ENST00000263351 FOXC1Q12948 553 aa12.8□□□□□ -0.36
ZNF541-201ENST00000263351 LY6G5BQ8NDX9 201 aa12.8□□□□□ -0.36
ZNF541-201ENST00000263351 DEFB104AQ8WTQ1 72 aa12.8□□□□□ -0.36
ZNF541-201ENST00000263351 PSMG3-AS1Q96PY0 264 aa12.8□□□□□ -0.36
ZNF541-201ENST00000263351 LINC00527Q9UJ94 153 aa12.8□□□□□ -0.36
ZNF541-201ENST00000263351 VMO1Q7Z5L0 202 aa12.79□□□□□ -0.36
ZNF541-201ENST00000263351 LYPD1Q8N2G4 141 aa12.79□□□□□ -0.36
ZNF541-201ENST00000263351 AGRNO00468 2067 aa12.79□□□□□ -0.36
ZNF541-201ENST00000263351 LEPP41159 167 aa12.79□□□□□ -0.36
ZNF541-201ENST00000263351 BOD1L2Q8IYS8 172 aa12.79□□□□□ -0.36
ZNF541-201ENST00000263351 NPBQ8NG41 125 aa12.79□□□□□ -0.36
ZNF541-201ENST00000263351 SMAD7O15105 426 aaKnown RBP12.78□□□□□ -0.36
ZNF541-201ENST00000263351 ADAMTSL5Q6ZMM2 481 aa12.78□□□□□ -0.36
ZNF541-201ENST00000263351 IGHV7-81A0A0B4J1V7 117 aa12.78□□□□□ -0.36
ZNF541-201ENST00000263351 A0A1W2PPR1 153 aa12.78□□□□□ -0.36
ZNF541-201ENST00000263351 GAGE10A6NGK3 116 aa12.78□□□□□ -0.36
ZNF541-201ENST00000263351 IGLC6P0CF74 106 aa12.78□□□□□ -0.36
ZNF541-201ENST00000263351 OR11H6Q8NGC7 330 aa12.78□□□□□ -0.36
ZNF541-201ENST00000263351 PEF1Q9UBV8 284 aaKnown RBP12.78□□□□□ -0.36
ZNF541-201ENST00000263351 IGF1P05019 195 aa12.77□□□□□ -0.36
ZNF541-201ENST00000263351 GTSCR1Q86UQ5 136 aa12.77□□□□□ -0.36
ZNF541-201ENST00000263351 A1L4Q6 167 aa12.77□□□□□ -0.37
ZNF541-201ENST00000263351 ODF3BA8MYP8 253 aa12.77□□□□□ -0.37
ZNF541-201ENST00000263351 CLEC3BP05452 202 aa12.77□□□□□ -0.37
ZNF541-201ENST00000263351 C15orf32Q32M92 178 aa12.77□□□□□ -0.37
ZNF541-201ENST00000263351 LGALS9BQ3B8N2 356 aa12.77□□□□□ -0.37
ZNF541-201ENST00000263351 LGALS9CQ6DKI2 356 aa12.77□□□□□ -0.37
ZNF541-201ENST00000263351 ZNF562Q6V9R5 426 aa12.77□□□□□ -0.37
ZNF541-201ENST00000263351 MEGF9Q9H1U4 602 aa12.77□□□□□ -0.37
ZNF541-201ENST00000263351 FXYD2P54710 66 aa12.76□□□□□ -0.37
ZNF541-201ENST00000263351 RAB1BQ9H0U4 201 aa12.76□□□□□ -0.37
ZNF541-201ENST00000263351 IGKV3D-20A0A0C4DH25 116 aa12.76□□□□□ -0.37
ZNF541-201ENST00000263351 Q6AWC8 147 aa12.76□□□□□ -0.37
ZNF541-201ENST00000263351 IGHV3OR16-10A0A075B7F0 116 aa12.76□□□□□ -0.37
ZNF541-201ENST00000263351 TNFRSF6BO95407 300 aa12.76□□□□□ -0.37
ZNF541-201ENST00000263351 RPL7P18124 248 aaKnown RBP12.76□□□□□ -0.37
ZNF541-201ENST00000263351 PDE6HQ13956 83 aa12.76□□□□□ -0.37
ZNF541-201ENST00000263351 CLEC19AQ6UXS0 136 aa12.75□□□□□ -0.37
ZNF541-201ENST00000263351 TMEM158Q8WZ71 300 aa12.75□□□□□ -0.37
ZNF541-201ENST00000263351 RNF5Q99942 180 aa12.75□□□□□ -0.37
ZNF541-201ENST00000263351 A0A0G2JLM5 398 aa12.75□□□□□ -0.37
ZNF541-201ENST00000263351 A0A1B0GW15 77 aa12.75□□□□□ -0.37
ZNF541-201ENST00000263351 PRSS1P07477 247 aa12.75□□□□□ -0.37
ZNF541-201ENST00000263351 GCSHP23434 173 aa12.75□□□□□ -0.37
ZNF541-201ENST00000263351 TTC9CQ8N5M4 171 aa12.75□□□□□ -0.37
ZNF541-201ENST00000263351 FOXC2Q99958 501 aa12.75□□□□□ -0.37
ZNF541-201ENST00000263351 UTP20O75691 2785 aaKnown RBP12.74□□□□□ -0.37
ZNF541-201ENST00000263351 FBLL1A6NHQ2 334 aaKnown RBP12.74□□□□□ -0.37
ZNF541-201ENST00000263351 ATP6V0E1O15342 81 aa12.74□□□□□ -0.37
ZNF541-201ENST00000263351 SAPCD1Q5SSQ6 148 aa12.74□□□□□ -0.37
ZNF541-201ENST00000263351 UFSP1Q6NVU6 142 aa12.74□□□□□ -0.37
ZNF541-201ENST00000263351 DTX2Q86UW9 622 aa12.74□□□□□ -0.37
ZNF541-201ENST00000263351 MSRB2Q9Y3D2 182 aa12.74□□□□□ -0.37
ZNF541-201ENST00000263351 PRTN3P24158 256 aa12.74□□□□□ -0.37
ZNF541-201ENST00000263351 EFNA4P52798 201 aa12.74□□□□□ -0.37
ZNF541-201ENST00000263351 VKORC1Q9BQB6 163 aa12.74□□□□□ -0.37
ZNF541-201ENST00000263351 UFC1Q9Y3C8 167 aa12.74□□□□□ -0.37
ZNF541-201ENST00000263351 C9orf118A6NHY6 69 aa12.73□□□□□ -0.37
ZNF541-201ENST00000263351 ODF1Q14990 250 aa12.73□□□□□ -0.37
ZNF541-201ENST00000263351 Q8N9W7 124 aa12.73□□□□□ -0.37
ZNF541-201ENST00000263351 AGPAT4-IT1Q9H0P7 198 aa12.73□□□□□ -0.37
ZNF541-201ENST00000263351 HHLA3Q9XRX5 114 aa12.73□□□□□ -0.37
ZNF541-201ENST00000263351 CLPSL1A2RUU4 121 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms