RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 ASPMQ8IZT6 3477 aa6.1□□□□□ -1.43
CXCR4-201ENST00000241393 PIEZO2Q9H5I5 2752 aa6.1□□□□□ -1.43
CXCR4-201ENST00000241393 LOC102724200A0A096LPH7 203 aaPredicted RBP6.09□□□□□ -1.43
CXCR4-201ENST00000241393 M0R2Z0 102 aa6.09□□□□□ -1.43
CXCR4-201ENST00000241393 APOHP02749 345 aaPredicted RBP6.09□□□□□ -1.43
CXCR4-201ENST00000241393 NTF3P20783 257 aa6.09□□□□□ -1.43
CXCR4-201ENST00000241393 PSG9Q00887 426 aa6.09□□□□□ -1.43
CXCR4-201ENST00000241393 RIGQ13278 110 aa6.09□□□□□ -1.43
CXCR4-201ENST00000241393 HES1Q14469 280 aa6.09□□□□□ -1.43
CXCR4-201ENST00000241393 TDRG1Q3Y452 100 aa6.09□□□□□ -1.43
CXCR4-201ENST00000241393 LHFPL4Q7Z7J7 247 aa6.09□□□□□ -1.43
CXCR4-201ENST00000241393 PRNTQ86SH4 94 aa6.09□□□□□ -1.43
CXCR4-201ENST00000241393 EXOC3-AS1Q8N2X6 119 aa6.09□□□□□ -1.43
CXCR4-201ENST00000241393 CIARTQ8N365 385 aaPredicted RBP6.09□□□□□ -1.43
CXCR4-201ENST00000241393 PGLYRP4Q96LB8 373 aa6.09□□□□□ -1.43
CXCR4-201ENST00000241393 SGK494Q96LW2 274 aa6.09□□□□□ -1.43
CXCR4-201ENST00000241393 SPTA1P02549 2419 aa6.09□□□□□ -1.43
CXCR4-201ENST00000241393 TPRP12270 2363 aaKnown RBP6.08□□□□□ -1.44
CXCR4-201ENST00000241393 A0A1B0GUT8 65 aa6.08□□□□□ -1.44
CXCR4-201ENST00000241393 H3BTX0 84 aa6.08□□□□□ -1.44
CXCR4-201ENST00000241393 CHEK1O14757 476 aa6.08□□□□□ -1.44
CXCR4-201ENST00000241393 TCAPO15273 167 aa6.08□□□□□ -1.44
CXCR4-201ENST00000241393 CRXO43186 299 aaPredicted RBP6.08□□□□□ -1.44
CXCR4-201ENST00000241393 RNF224P0DH78 156 aa6.08□□□□□ -1.44
CXCR4-201ENST00000241393 IGLC3P0DOY3 106 aa6.08□□□□□ -1.44
CXCR4-201ENST00000241393 SFTPCP11686 197 aa6.08□□□□□ -1.44
CXCR4-201ENST00000241393 RPL7P18124 248 aaKnown RBP6.08□□□□□ -1.44
CXCR4-201ENST00000241393 CSN1S1P47710 185 aa6.08□□□□□ -1.44
CXCR4-201ENST00000241393 KLRD1Q13241 179 aa6.08□□□□□ -1.44
CXCR4-201ENST00000241393 SPATA45Q537H7 98 aa6.08□□□□□ -1.44
CXCR4-201ENST00000241393 RNASEKQ6P5S7 137 aaKnown RBP6.08□□□□□ -1.44
CXCR4-201ENST00000241393 FAM19A2Q8N3H0 131 aa6.08□□□□□ -1.44
CXCR4-201ENST00000241393 ABCA1O95477 2261 aa6.08□□□□□ -1.44
CXCR4-201ENST00000241393 ABCA4P78363 2273 aa6.08□□□□□ -1.44
CXCR4-201ENST00000241393 BSNQ9UPA5 3926 aa6.08□□□□□ -1.44
CXCR4-201ENST00000241393 TRAV9-2A0A087WT02 112 aa6.07□□□□□ -1.44
CXCR4-201ENST00000241393 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.07□□□□□ -1.44
CXCR4-201ENST00000241393 TRAV8-1A0A0A6YYK1 113 aa6.07□□□□□ -1.44
CXCR4-201ENST00000241393 C2orf70A6NJV1 201 aa6.07□□□□□ -1.44
CXCR4-201ENST00000241393 INAFM1C9JVW0 142 aa6.07□□□□□ -1.44
CXCR4-201ENST00000241393 OVOL3O00110 214 aa6.07□□□□□ -1.44
CXCR4-201ENST00000241393 LY6HO94772 140 aa6.07□□□□□ -1.44
CXCR4-201ENST00000241393 FAM106CPP0CH98 169 aa6.07□□□□□ -1.44
CXCR4-201ENST00000241393 CT45A10P0DMU9 189 aa6.07□□□□□ -1.44
CXCR4-201ENST00000241393 RAB9AP51151 201 aa6.07□□□□□ -1.44
CXCR4-201ENST00000241393 SAPCD1Q5SSQ6 148 aa6.07□□□□□ -1.44
CXCR4-201ENST00000241393 ZC2HC1AQ96GY0 325 aa6.07□□□□□ -1.44
CXCR4-201ENST00000241393 TMEM70Q9BUB7 260 aa6.07□□□□□ -1.44
CXCR4-201ENST00000241393 SIRPDQ9H106 197 aa6.07□□□□□ -1.44
CXCR4-201ENST00000241393 LINC00614P0C842 121 aa6.07□□□□□ -1.44
CXCR4-201ENST00000241393 UBE2E1P51965 193 aa6.07□□□□□ -1.44
CXCR4-201ENST00000241393 SEC61BP60468 96 aaKnown RBP6.07□□□□□ -1.44
CXCR4-201ENST00000241393 NDPQ00604 133 aa6.07□□□□□ -1.44
CXCR4-201ENST00000241393 Q56UQ5 140 aa6.07□□□□□ -1.44
CXCR4-201ENST00000241393 EBLN2Q6P2I7 272 aa6.07□□□□□ -1.44
CXCR4-201ENST00000241393 ZNF493Q6ZR52 646 aa6.07□□□□□ -1.44
CXCR4-201ENST00000241393 IGHV7-81A0A0B4J1V7 117 aa6.06□□□□□ -1.44
CXCR4-201ENST00000241393 IGHV2-70DA0A0C4DH43 119 aa6.06□□□□□ -1.44
CXCR4-201ENST00000241393 NCBP2LA6PVI3 153 aaKnown RBP6.06□□□□□ -1.44
CXCR4-201ENST00000241393 EFNA4P52798 201 aa6.06□□□□□ -1.44
CXCR4-201ENST00000241393 RPS20P60866 119 aaKnown RBP6.06□□□□□ -1.44
CXCR4-201ENST00000241393 COL5A1-AS1Q5SY13 56 aa6.06□□□□□ -1.44
CXCR4-201ENST00000241393 FAM120AOSQ5T036 256 aa6.06□□□□□ -1.44
CXCR4-201ENST00000241393 PRR26Q8N8Z3 221 aa6.06□□□□□ -1.44
CXCR4-201ENST00000241393 Q8N9W7 124 aa6.06□□□□□ -1.44
CXCR4-201ENST00000241393 C17orf77Q96MU5 243 aa6.06□□□□□ -1.44
CXCR4-201ENST00000241393 ATP6V0BQ99437 205 aa6.06□□□□□ -1.44
CXCR4-201ENST00000241393 LPAR2Q9HBW0 351 aa6.06□□□□□ -1.44
CXCR4-201ENST00000241393 RABAC1Q9UI14 185 aa6.06□□□□□ -1.44
CXCR4-201ENST00000241393 MRPS16Q9Y3D3 137 aaKnown RBP6.06□□□□□ -1.44
CXCR4-201ENST00000241393 IGF2RP11717 2491 aa6.06□□□□□ -1.44
CXCR4-201ENST00000241393 SPTBN4Q9H254 2564 aa6.05□□□□□ -1.44
CXCR4-201ENST00000241393 A0A087X0K7 114 aa6.05□□□□□ -1.44
CXCR4-201ENST00000241393 IGHV1-24A0A0C4DH33 117 aa6.05□□□□□ -1.44
CXCR4-201ENST00000241393 LEPROTL1O95214 131 aa6.05□□□□□ -1.44
CXCR4-201ENST00000241393 IGKV2-30P06310 120 aa6.05□□□□□ -1.44
CXCR4-201ENST00000241393 CTSGP08311 255 aa6.05□□□□□ -1.44
CXCR4-201ENST00000241393 CD24P25063 80 aa6.05□□□□□ -1.44
CXCR4-201ENST00000241393 CRIP1P50238 77 aa6.05□□□□□ -1.44
CXCR4-201ENST00000241393 KLF17Q5JT82 389 aaPredicted RBP6.05□□□□□ -1.44
CXCR4-201ENST00000241393 DYNAPQ8N1N2 210 aa6.05□□□□□ -1.44
CXCR4-201ENST00000241393 HSPB8Q9UJY1 196 aa6.05□□□□□ -1.44
CXCR4-201ENST00000241393 ADGRG4Q8IZF6 3080 aa6.05□□□□□ -1.44
CXCR4-201ENST00000241393 ATMQ13315 3056 aa6.05□□□□□ -1.44
CXCR4-201ENST00000241393 SYS1-DBNDD2H3BUS1 97 aa6.04□□□□□ -1.44
CXCR4-201ENST00000241393 M0QZ24 198 aa6.04□□□□□ -1.44
CXCR4-201ENST00000241393 M0R3E3 92 aa6.04□□□□□ -1.44
CXCR4-201ENST00000241393 ARMS2P0C7Q2 107 aa6.04□□□□□ -1.44
CXCR4-201ENST00000241393 BMI1P35226 326 aa6.04□□□□□ -1.44
CXCR4-201ENST00000241393 HNRNPA3P51991 378 aaKnown RBP6.04□□□□□ -1.44
CXCR4-201ENST00000241393 ODF3L2Q3SX64 289 aa6.04□□□□□ -1.44
CXCR4-201ENST00000241393 PET117Q6UWS5 81 aa6.04□□□□□ -1.44
CXCR4-201ENST00000241393 ZNF502Q8TBZ5 544 aa6.04□□□□□ -1.44
CXCR4-201ENST00000241393 ST20Q9HBF5 79 aa6.04□□□□□ -1.44
CXCR4-201ENST00000241393 A0A1W2PRD5 423 aa6.04□□□□□ -1.44
CXCR4-201ENST00000241393 A0A1W2PRF3 423 aa6.04□□□□□ -1.44
CXCR4-201ENST00000241393 A0A1W2PRM7 423 aa6.04□□□□□ -1.44
CXCR4-201ENST00000241393 hDV102S1A0JD36 115 aa6.04□□□□□ -1.44
CXCR4-201ENST00000241393 TMEM189A5PLL7 270 aa6.04□□□□□ -1.44
CXCR4-201ENST00000241393 LCN12Q6JVE5 192 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms