RNA–Protein interactions for RNA: ENST00000164640.8

PDZD4-201, Transcript of PDZ domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDZD4, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-201ENST00000164640 RAXQ9Y2V3 346 aa11.87□□□□□ -0.51
PDZD4-201ENST00000164640 SIGLEC9Q9Y336 463 aa11.87□□□□□ -0.51
PDZD4-201ENST00000164640 SPTA1P02549 2419 aa11.86□□□□□ -0.51
PDZD4-201ENST00000164640 NBASA2RRP1 2371 aa11.86□□□□□ -0.51
PDZD4-201ENST00000164640 IGLV1-44P01699 117 aa11.86□□□□□ -0.51
PDZD4-201ENST00000164640 IGLV2-23P01705 113 aa11.86□□□□□ -0.51
PDZD4-201ENST00000164640 PRTN3P24158 256 aa11.86□□□□□ -0.51
PDZD4-201ENST00000164640 IGHV3-49A0A0A0MS15 119 aa11.85□□□□□ -0.51
PDZD4-201ENST00000164640 ERCC8Q13216 396 aa11.85□□□□□ -0.51
PDZD4-201ENST00000164640 DLX4Q92988 240 aaPredicted RBP11.85□□□□□ -0.51
PDZD4-201ENST00000164640 RNF183Q96D59 192 aa11.85□□□□□ -0.51
PDZD4-201ENST00000164640 B5MCH6 92 aa11.85□□□□□ -0.51
PDZD4-201ENST00000164640 IGKV1-17P01599 117 aa11.85□□□□□ -0.51
PDZD4-201ENST00000164640 WI2-2373I1.2A0A1W2PRP0 233 aa11.85□□□□□ -0.51
PDZD4-201ENST00000164640 EMP1P54849 157 aa11.85□□□□□ -0.51
PDZD4-201ENST00000164640 FOXI1Q12951 378 aa11.85□□□□□ -0.51
PDZD4-201ENST00000164640 HIGD1BQ9P298 99 aa11.85□□□□□ -0.51
PDZD4-201ENST00000164640 ONECUT1Q9UBC0 465 aa11.85□□□□□ -0.51
PDZD4-201ENST00000164640 ZNF815PA8K554 130 aa11.84□□□□□ -0.51
PDZD4-201ENST00000164640 SCGB3A1Q96QR1 104 aa11.84□□□□□ -0.51
PDZD4-201ENST00000164640 SPATA25Q9BR10 227 aa11.84□□□□□ -0.51
PDZD4-201ENST00000164640 HLA-DRB4P13762 266 aa11.84□□□□□ -0.51
PDZD4-201ENST00000164640 TMEM30BQ3MIR4 351 aa11.84□□□□□ -0.51
PDZD4-201ENST00000164640 ZNF493Q6ZR52 646 aa11.84□□□□□ -0.51
PDZD4-201ENST00000164640 TDHQ8IZJ6 230 aa11.84□□□□□ -0.51
PDZD4-201ENST00000164640 PRR25Q96S07 402 aa11.84□□□□□ -0.51
PDZD4-201ENST00000164640 PLSCR4Q9NRQ2 329 aa11.84□□□□□ -0.51
PDZD4-201ENST00000164640 HHLA3Q9XRX5 114 aa11.84□□□□□ -0.51
PDZD4-201ENST00000164640 HLA-DRB4X5D2U9 266 aa11.84□□□□□ -0.51
PDZD4-201ENST00000164640 TMEM238LA0A1B0GVL6 79 aa11.84□□□□□ -0.51
PDZD4-201ENST00000164640 A6NJY4 79 aa11.84□□□□□ -0.51
PDZD4-201ENST00000164640 SRSF6Q13247 344 aaKnown RBP11.84□□□□□ -0.51
PDZD4-201ENST00000164640 Q1RN00 199 aa11.84□□□□□ -0.51
PDZD4-201ENST00000164640 TEX29Q8N6K0 151 aa11.84□□□□□ -0.51
PDZD4-201ENST00000164640 TMEM14CQ9P0S9 112 aa11.84□□□□□ -0.51
PDZD4-201ENST00000164640 C3orf36Q3SXR2 165 aa11.83□□□□□ -0.51
PDZD4-201ENST00000164640 PRSS29PA6NIE9 313 aa11.83□□□□□ -0.52
PDZD4-201ENST00000164640 FABP5P3A8MUU1 101 aa11.83□□□□□ -0.52
PDZD4-201ENST00000164640 SMPXQ9UHP9 88 aa11.83□□□□□ -0.52
PDZD4-201ENST00000164640 SPRY2O43597 315 aa11.83□□□□□ -0.52
PDZD4-201ENST00000164640 LAGE3Q14657 143 aa11.83□□□□□ -0.52
PDZD4-201ENST00000164640 DTX2Q86UW9 622 aa11.83□□□□□ -0.52
PDZD4-201ENST00000164640 TM2D2Q9BX73 214 aa11.83□□□□□ -0.52
PDZD4-201ENST00000164640 DMDP11532 3685 aa11.82□□□□□ -0.52
PDZD4-201ENST00000164640 TRAV17A0A0B4J275 112 aa11.82□□□□□ -0.52
PDZD4-201ENST00000164640 CRYGCP07315 174 aa11.82□□□□□ -0.52
PDZD4-201ENST00000164640 MGPP08493 103 aa11.82□□□□□ -0.52
PDZD4-201ENST00000164640 ZNF80P51504 273 aaPredicted RBP11.82□□□□□ -0.52
PDZD4-201ENST00000164640 LOC400499M0QZD8 3231 aa11.82□□□□□ -0.52
PDZD4-201ENST00000164640 S100A4P26447 101 aaKnown RBP11.82□□□□□ -0.52
PDZD4-201ENST00000164640 DEFB109BQ30KR1 87 aa11.82□□□□□ -0.52
PDZD4-201ENST00000164640 ZNF491Q8N8L2 437 aa11.82□□□□□ -0.52
PDZD4-201ENST00000164640 TRAV8-2A0A0B4J237 113 aa11.82□□□□□ -0.52
PDZD4-201ENST00000164640 ZNF474Q6S9Z5 364 aaPredicted RBP11.82□□□□□ -0.52
PDZD4-201ENST00000164640 BOD1L1Q8NFC6 3051 aa11.81□□□□□ -0.52
PDZD4-201ENST00000164640 C16orf97H3BN30 126 aa11.81□□□□□ -0.52
PDZD4-201ENST00000164640 TCTEX1D4Q5JR98 221 aa11.81□□□□□ -0.52
PDZD4-201ENST00000164640 PSMG4Q5JS54 123 aa11.81□□□□□ -0.52
PDZD4-201ENST00000164640 C1QTNF4Q9BXJ3 329 aa11.81□□□□□ -0.52
PDZD4-201ENST00000164640 M0R381 172 aa11.81□□□□□ -0.52
PDZD4-201ENST00000164640 SCGB2A1O75556 95 aa11.81□□□□□ -0.52
PDZD4-201ENST00000164640 ZFP2Q6ZN57 461 aa11.81□□□□□ -0.52
PDZD4-201ENST00000164640 TRBV20-1A0A075B6N2 111 aa11.81□□□□□ -0.52
PDZD4-201ENST00000164640 A0A1W2PNU3 283 aaPredicted RBP11.81□□□□□ -0.52
PDZD4-201ENST00000164640 VSTM5A8MXK1 200 aa11.81□□□□□ -0.52
PDZD4-201ENST00000164640 H3BRN7 92 aa11.81□□□□□ -0.52
PDZD4-201ENST00000164640 IGHV1-8P0DP01 117 aa11.81□□□□□ -0.52
PDZD4-201ENST00000164640 GATA3P23771 443 aa11.81□□□□□ -0.52
PDZD4-201ENST00000164640 ZFAND6Q6FIF0 208 aa11.81□□□□□ -0.52
PDZD4-201ENST00000164640 BEX4Q9NWD9 120 aaPredicted RBP11.81□□□□□ -0.52
PDZD4-201ENST00000164640 TMEM78Q5T7P6 136 aa11.8□□□□□ -0.52
PDZD4-201ENST00000164640 C1orf122Q6ZSJ8 110 aa11.8□□□□□ -0.52
PDZD4-201ENST00000164640 RNF182Q8N6D2 247 aa11.8□□□□□ -0.52
PDZD4-201ENST00000164640 PHLDA1Q8WV24 401 aaPredicted RBP11.8□□□□□ -0.52
PDZD4-201ENST00000164640 MYMXA0A1B0GTQ4 84 aa11.8□□□□□ -0.52
PDZD4-201ENST00000164640 TTC32Q5I0X7 151 aa11.8□□□□□ -0.52
PDZD4-201ENST00000164640 LYPD1Q8N2G4 141 aa11.8□□□□□ -0.52
PDZD4-201ENST00000164640 IGHV1-3A0A0C4DH29 117 aa11.79□□□□□ -0.52
PDZD4-201ENST00000164640 A8MWV9 139 aa11.79□□□□□ -0.52
PDZD4-201ENST00000164640 INS-IGF2F8WCM5 200 aa11.79□□□□□ -0.52
PDZD4-201ENST00000164640 LYNX1G3V0Z9 82 aa11.79□□□□□ -0.52
PDZD4-201ENST00000164640 TRGV3P03979 118 aa11.79□□□□□ -0.52
PDZD4-201ENST00000164640 LYNX1P0DP58 116 aa11.79□□□□□ -0.52
PDZD4-201ENST00000164640 WT1P19544 449 aaPredicted RBP11.79□□□□□ -0.52
PDZD4-201ENST00000164640 LYRM7Q5U5X0 104 aa11.79□□□□□ -0.52
PDZD4-201ENST00000164640 C17orf100A8MU93 164 aa11.79□□□□□ -0.52
PDZD4-201ENST00000164640 MFAP4P55083 255 aa11.79□□□□□ -0.52
PDZD4-201ENST00000164640 XGP55808 180 aa11.79□□□□□ -0.52
PDZD4-201ENST00000164640 SRSF1Q07955 248 aaKnown RBP eCLIP11.79□□□□□ -0.52
PDZD4-201ENST00000164640 PVRIGQ6DKI7 326 aa11.79□□□□□ -0.52
PDZD4-201ENST00000164640 K7EM74 188 aa11.79□□□□□ -0.52
PDZD4-201ENST00000164640 Q6ZUT4 128 aa11.79□□□□□ -0.52
PDZD4-201ENST00000164640 FAM90A27PA6NNH2 459 aa11.78□□□□□ -0.52
PDZD4-201ENST00000164640 PLNP26678 52 aa11.78□□□□□ -0.52
PDZD4-201ENST00000164640 GATA4P43694 442 aa11.78□□□□□ -0.52
PDZD4-201ENST00000164640 RAX2Q96IS3 184 aa11.78□□□□□ -0.52
PDZD4-201ENST00000164640 U3KQK5 164 aa11.78□□□□□ -0.52
PDZD4-201ENST00000164640 ACACAQ13085 2346 aa11.78□□□□□ -0.52
PDZD4-201ENST00000164640 SLC25A16P16260 332 aa11.78□□□□□ -0.52
PDZD4-201ENST00000164640 Q8N8P6 123 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms