RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Lin7cO88952 197 aaKnown RBP7.51□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Meox1P32442 253 aa7.51□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Gltpd2Q8K0R6 321 aa7.51□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Ssbp1Q9CYR0 152 aaKnown RBP7.51□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Srsf10Q9R0U0 262 aaKnown RBP7.51□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Trav16A0A075B653 116 aa7.51□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Gm39566A0A1B0GT45 1251 aa7.51□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Gm5225J3QPL3 108 aa7.51□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Ifna4P07351 186 aa7.51□□□□□ -1.21
Col28a1-201ENSMUST00000115537 TgfaP48030 159 aa7.51□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Defa6P50704 93 aa7.51□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Arl14eplQ3UKZ7 152 aa7.51□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Olfr965Q7TRA7 312 aa7.51□□□□□ -1.21
Col28a1-201ENSMUST00000115537 D330020A13RikQ8C799 211 aa7.51□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Olfr281Q8VET6 311 aa7.51□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Osr2Q91ZD1 312 aa7.51□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Vmn1r54Q9EPB8 315 aa7.51□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Ramp3Q9WUP1 147 aa7.51□□□□□ -1.21
Col28a1-201ENSMUST00000115537 St6galnac3Q9WUV2 305 aa7.51□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Ankhd1E9PUR0 2548 aaKnown RBP7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Olfr1016A2ASV2 309 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 P06323 132 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Guca2aP33680 116 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Mbd6Q3TY92 1003 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 5730522E02RikQ5SP45 163 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Cd200r1lQ6XJV6 249 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Mgst1Q91VS7 155 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Bbc3Q99ML1 193 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Shisa5Q9D7I0 235 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 EsdQ9R0P3 282 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Col12a1Q60847 3120 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 AU041133A0A0J9YVH3 498 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Rps2-ps6A0A140T8L5 221 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Gm10203F6QJ09 66 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Mef2bO55087 349 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 P01822 137 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 F2rl1P55086 399 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Slc25a26Q5U680 274 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Tnfsf18Q7TS55 173 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Klre1Q8CJC7 226 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Olfr976Q8VF15 326 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 DnlzQ9D113 177 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Dram1Q9DC58 238 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Spry4Q9WTP2 300 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Trav6d-5A0A075B6B9 112 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Trav12-1A0N8R1 115 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Bcl6bO88282 474 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 TymsP07607 307 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Wfdc18P62810 74 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Vdac2Q60930 295 aaKnown RBP7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 PtafrQ62035 341 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Foxb1Q64732 325 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 SriQ6P069 198 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Zpld1Q8BGZ8 415 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 COA4Q8BT51 87 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 TprkbQ8QZZ7 175 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Vmn1r70Q8R254 298 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Olfr1202Q8VF98 309 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Olfr344Q8VFP9 309 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Defb7Q91V70 71 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Sh3bgrl3Q91VW3 93 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Cox20Q9D7J4 117 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Try5Q9QUK9 246 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Try4Q9R0T7 246 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Gab2Q9Z1S8 665 aa7.5□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Olfr1369-ps1A0A140T8K7 317 aa7.49□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Olfr282A1L1B4 308 aa7.49□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Gm13769A2ATW2 309 aa7.49□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Gm9242J3QNY1 357 aa7.49□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Gm8653K9J7G2 307 aa7.49□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Vmn1r117L7N2C9 307 aa7.49□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Klf12O35738 402 aa7.49□□□□□ -1.21
Col28a1-201ENSMUST00000115537 CrpP14847 225 aa7.49□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Reep5Q60870 185 aa7.49□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Foxc2Q61850 494 aa7.49□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Olfr263Q7TQT8 317 aa7.49□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Pxt1Q8K459 51 aa7.49□□□□□ -1.21
Col28a1-201ENSMUST00000115537 RtbdnQ8QZY4 247 aa7.49□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Vmn1r233Q8R294 319 aa7.49□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Olfr303Q8VFP0 319 aa7.49□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Olfr483Q8VG05 315 aa7.49□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Rnps1Q99M28 305 aaKnown RBP7.49□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Snrnp200Q6P4T2 2136 aaKnown RBP7.49□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Sdk2Q6V4S5 2176 aa7.49□□□□□ -1.21
Col28a1-201ENSMUST00000115537 C2cd3Q52KB6 2323 aa7.49□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Twist1P26687 206 aa7.49□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Nr2c2apQ3TV70 140 aa7.49□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Klk1b21Q61759 261 aa7.49□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Hide1Q75VT8 222 aa7.49□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Gm10190Q8BSD7 107 aa7.49□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Rps19bp1Q8C6B9 143 aaKnown RBP7.49□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Olfr1265Q8VEZ3 309 aa7.49□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Olfr495Q8VF12 330 aa7.49□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Plxdc1Q91ZV7 500 aa7.49□□□□□ -1.21
Col28a1-201ENSMUST00000115537 LbhQ9CX60 105 aa7.49□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Fzr1Q9R1K5 493 aa7.49□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Adam11Q9R1V4 773 aa7.49□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Ighv1-62-2A0A0A6YXZ4 119 aa7.49□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Zfp931A2AHM2 298 aa7.49□□□□□ -1.21
Col28a1-201ENSMUST00000115537 Gm44501A8R0T9 150 aa7.49□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 36.4 ms