RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 CCDC140Q96MF4 163 aa14.86□□□□□ -0.03
PRKCSH-209ENST00000589838 SLC50A1Q9BRV3 221 aa14.86□□□□□ -0.03
PRKCSH-209ENST00000589838 PAM16Q9Y3D7 125 aa14.86□□□□□ -0.03
PRKCSH-209ENST00000589838 RELNP78509 3460 aa14.86□□□□□ -0.03
PRKCSH-209ENST00000589838 IGHV3-35A0A0C4DH35 117 aa14.85□□□□□ -0.03
PRKCSH-209ENST00000589838 FAM181BA6NEQ2 426 aa14.85□□□□□ -0.03
PRKCSH-209ENST00000589838 ARMS2P0C7Q2 107 aa14.85□□□□□ -0.03
PRKCSH-209ENST00000589838 ATP5J2P56134 94 aa14.85□□□□□ -0.03
PRKCSH-209ENST00000589838 MRPL52Q86TS9 123 aaKnown RBP14.85□□□□□ -0.03
PRKCSH-209ENST00000589838 METTL26Q96S19 204 aa14.85□□□□□ -0.03
PRKCSH-209ENST00000589838 ASCL2Q99929 193 aa14.85□□□□□ -0.03
PRKCSH-209ENST00000589838 SH2D1AO60880 128 aa14.84□□□□□ -0.03
PRKCSH-209ENST00000589838 PMCHL1Q16048 86 aa14.84□□□□□ -0.03
PRKCSH-209ENST00000589838 TDRG1Q3Y452 100 aa14.84□□□□□ -0.03
PRKCSH-209ENST00000589838 LCN12Q6JVE5 192 aa14.84□□□□□ -0.03
PRKCSH-209ENST00000589838 MED13LQ71F56 2210 aa14.84□□□□□ -0.03
PRKCSH-209ENST00000589838 TRAV40A0A0B4J280 105 aa14.84□□□□□ -0.03
PRKCSH-209ENST00000589838 BTF3P20290 206 aaKnown RBP14.84□□□□□ -0.03
PRKCSH-209ENST00000589838 TMEM219Q86XT9 240 aa14.84□□□□□ -0.03
PRKCSH-209ENST00000589838 ZMAT5Q9UDW3 170 aaKnown RBP14.84□□□□□ -0.03
PRKCSH-209ENST00000589838 IGHV3OR16-10A0A075B7F0 116 aa14.83□□□□□ -0.04
PRKCSH-209ENST00000589838 RBAKDNA6NC62 111 aa14.83□□□□□ -0.04
PRKCSH-209ENST00000589838 M0R143 59 aa14.83□□□□□ -0.04
PRKCSH-209ENST00000589838 SRSF2Q01130 221 aaKnown RBP14.83□□□□□ -0.04
PRKCSH-209ENST00000589838 ZNF705AQ6ZN79 300 aaPredicted RBP14.83□□□□□ -0.04
PRKCSH-209ENST00000589838 PIFOQ8TCI5 191 aa14.83□□□□□ -0.04
PRKCSH-209ENST00000589838 IGHV3OR16-8A0A075B7F1 116 aa14.82□□□□□ -0.04
PRKCSH-209ENST00000589838 LINC00614P0C842 121 aa14.82□□□□□ -0.04
PRKCSH-209ENST00000589838 C19orf54Q5BKX5 351 aa14.82□□□□□ -0.04
PRKCSH-209ENST00000589838 SPOCK3Q9BQ16 436 aa14.82□□□□□ -0.04
PRKCSH-209ENST00000589838 IGHG4P01861 327 aa14.82□□□□□ -0.04
PRKCSH-209ENST00000589838 ZNF493Q6ZR52 646 aa14.82□□□□□ -0.04
PRKCSH-209ENST00000589838 URB1-AS1Q96HZ7 61 aa14.82□□□□□ -0.04
PRKCSH-209ENST00000589838 CLPSL1A2RUU4 121 aa14.81□□□□□ -0.04
PRKCSH-209ENST00000589838 OR5AL1P0C617 328 aa14.81□□□□□ -0.04
PRKCSH-209ENST00000589838 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.81□□□□□ -0.04
PRKCSH-209ENST00000589838 BRD3OSQ6XYD6 125 aa14.81□□□□□ -0.04
PRKCSH-209ENST00000589838 VGLL1Q99990 258 aa14.81□□□□□ -0.04
PRKCSH-209ENST00000589838 TPPP3Q9BW30 176 aa14.81□□□□□ -0.04
PRKCSH-209ENST00000589838 M0QZK8 103 aa14.8□□□□□ -0.04
PRKCSH-209ENST00000589838 DSCR9P59020 149 aa14.8□□□□□ -0.04
PRKCSH-209ENST00000589838 MRPL53Q96EL3 112 aaKnown RBP14.8□□□□□ -0.04
PRKCSH-209ENST00000589838 BRI3O95415 125 aa14.8□□□□□ -0.04
PRKCSH-209ENST00000589838 TRGV3P03979 118 aa14.8□□□□□ -0.04
PRKCSH-209ENST00000589838 IGF1P05019 195 aa14.8□□□□□ -0.04
PRKCSH-209ENST00000589838 MSMBP08118 114 aa14.8□□□□□ -0.04
PRKCSH-209ENST00000589838 PRB4P10163 310 aaPredicted RBP14.8□□□□□ -0.04
PRKCSH-209ENST00000589838 SPATA45Q537H7 98 aa14.8□□□□□ -0.04
PRKCSH-209ENST00000589838 LYZL1Q6UWQ5 148 aa14.8□□□□□ -0.04
PRKCSH-209ENST00000589838 KLHDC1Q8N7A1 406 aa14.8□□□□□ -0.04
PRKCSH-209ENST00000589838 CLEC5AQ9NY25 188 aa14.8□□□□□ -0.04
PRKCSH-209ENST00000589838 ITPR1Q14643 2758 aa14.79□□□□□ -0.04
PRKCSH-209ENST00000589838 H3BUA1 57 aa14.79□□□□□ -0.04
PRKCSH-209ENST00000589838 HLA-DMBP28068 263 aa14.79□□□□□ -0.04
PRKCSH-209ENST00000589838 CTRLP40313 264 aa14.79□□□□□ -0.04
PRKCSH-209ENST00000589838 IGFL4Q6B9Z1 124 aa14.79□□□□□ -0.04
PRKCSH-209ENST00000589838 EBLN2Q6P2I7 272 aa14.79□□□□□ -0.04
PRKCSH-209ENST00000589838 TMEM70Q9BUB7 260 aa14.79□□□□□ -0.04
PRKCSH-209ENST00000589838 U3KQE9 123 aa14.79□□□□□ -0.04
PRKCSH-209ENST00000589838 IGHV4-30-2A0A087WSY4 118 aa14.78□□□□□ -0.04
PRKCSH-209ENST00000589838 C2orf70A6NJV1 201 aa14.78□□□□□ -0.04
PRKCSH-209ENST00000589838 FABP5P3A8MUU1 101 aa14.78□□□□□ -0.04
PRKCSH-209ENST00000589838 PRR31Q5SQ13 230 aa14.78□□□□□ -0.04
PRKCSH-209ENST00000589838 HIF1ANQ9NWT6 349 aa14.78□□□□□ -0.04
PRKCSH-209ENST00000589838 TMSB15BA0A087X1C1 80 aa14.78□□□□□ -0.04
PRKCSH-209ENST00000589838 A0A1B0GV90 55 aa14.78□□□□□ -0.04
PRKCSH-209ENST00000589838 C20orf202A1L168 122 aa14.78□□□□□ -0.04
PRKCSH-209ENST00000589838 Q8TAT8 98 aa14.78□□□□□ -0.04
PRKCSH-209ENST00000589838 SNHG12Q9BXW3 62 aa14.78□□□□□ -0.04
PRKCSH-209ENST00000589838 IGHV1-24A0A0C4DH33 117 aa14.77□□□□□ -0.05
PRKCSH-209ENST00000589838 A6NDX4 124 aa14.77□□□□□ -0.05
PRKCSH-209ENST00000589838 LEPROTL1O95214 131 aa14.77□□□□□ -0.05
PRKCSH-209ENST00000589838 IGHV4-38-2P0DP08 117 aa14.77□□□□□ -0.05
PRKCSH-209ENST00000589838 USMG5Q96IX5 58 aa14.77□□□□□ -0.05
PRKCSH-209ENST00000589838 IGHG2P01859 326 aa14.76□□□□□ -0.05
PRKCSH-209ENST00000589838 GATA3P23771 443 aa14.76□□□□□ -0.05
PRKCSH-209ENST00000589838 ARL3P36405 182 aa14.76□□□□□ -0.05
PRKCSH-209ENST00000589838 FER1L6-AS1Q8NA97 138 aa14.76□□□□□ -0.05
PRKCSH-209ENST00000589838 IGHV3-66A0A0C4DH42 116 aa14.76□□□□□ -0.05
PRKCSH-209ENST00000589838 B4DSR2 109 aa14.76□□□□□ -0.05
PRKCSH-209ENST00000589838 M0QZ24 198 aa14.76□□□□□ -0.05
PRKCSH-209ENST00000589838 EREGO14944 169 aa14.76□□□□□ -0.05
PRKCSH-209ENST00000589838 UQCR10Q9UDW1 63 aa14.76□□□□□ -0.05
PRKCSH-209ENST00000589838 AKAP6Q13023 2319 aa14.75□□□□□ -0.05
PRKCSH-209ENST00000589838 H3BUX3 64 aa14.75□□□□□ -0.05
PRKCSH-209ENST00000589838 ZNF80P51504 273 aaPredicted RBP14.75□□□□□ -0.05
PRKCSH-209ENST00000589838 FAM104BQ5XKR9 115 aa14.75□□□□□ -0.05
PRKCSH-209ENST00000589838 HSPB8Q9UJY1 196 aa14.75□□□□□ -0.05
PRKCSH-209ENST00000589838 ABCA2Q9BZC7 2435 aa14.75□□□□□ -0.05
PRKCSH-209ENST00000589838 TRAV9-2A0A087WT02 112 aa14.74□□□□□ -0.05
PRKCSH-209ENST00000589838 CRXO43186 299 aaPredicted RBP14.74□□□□□ -0.05
PRKCSH-209ENST00000589838 ORM1P02763 201 aa14.74□□□□□ -0.05
PRKCSH-209ENST00000589838 LY6EQ16553 131 aa14.74□□□□□ -0.05
PRKCSH-209ENST00000589838 LINC00527Q9UJ94 153 aa14.74□□□□□ -0.05
PRKCSH-209ENST00000589838 U3KQK5 164 aa14.74□□□□□ -0.05
PRKCSH-209ENST00000589838 PRAC2D3DTV9 90 aa14.74□□□□□ -0.05
PRKCSH-209ENST00000589838 NDUFA4O00483 81 aa14.74□□□□□ -0.05
PRKCSH-209ENST00000589838 IGLC6P0CF74 106 aa14.74□□□□□ -0.05
PRKCSH-209ENST00000589838 ERCC8Q13216 396 aa14.74□□□□□ -0.05
PRKCSH-209ENST00000589838 TMEM78Q5T7P6 136 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms