RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 SRSF2Q01130 221 aaKnown RBP16.46■□□□□ 0.23
ARHGEF40-204ENST00000555038 PRR25Q96S07 402 aa16.46■□□□□ 0.23
ARHGEF40-204ENST00000555038 VAMP8Q9BV40 100 aa16.46■□□□□ 0.23
ARHGEF40-204ENST00000555038 RBAKDNA6NC62 111 aa16.46■□□□□ 0.22
ARHGEF40-204ENST00000555038 H3BUA1 57 aa16.46■□□□□ 0.22
ARHGEF40-204ENST00000555038 M0QZK8 103 aa16.46■□□□□ 0.22
ARHGEF40-204ENST00000555038 IGF1P05019 195 aa16.46■□□□□ 0.22
ARHGEF40-204ENST00000555038 BMI1P35226 326 aa16.46■□□□□ 0.22
ARHGEF40-204ENST00000555038 Q71RC1 249 aaPredicted RBP16.46■□□□□ 0.22
ARHGEF40-204ENST00000555038 Q8N976 141 aa16.46■□□□□ 0.22
ARHGEF40-204ENST00000555038 C8orf49Q96NF6 230 aa16.46■□□□□ 0.22
ARHGEF40-204ENST00000555038 METTL26Q96S19 204 aa16.46■□□□□ 0.22
ARHGEF40-204ENST00000555038 MSMBP08118 114 aa16.45■□□□□ 0.22
ARHGEF40-204ENST00000555038 TMEM219Q86XT9 240 aa16.45■□□□□ 0.22
ARHGEF40-204ENST00000555038 MED13LQ71F56 2210 aa16.45■□□□□ 0.22
ARHGEF40-204ENST00000555038 IGHV4-30-2A0A087WSY4 118 aa16.44■□□□□ 0.22
ARHGEF40-204ENST00000555038 IGKV2-40A0A087WW87 121 aaPredicted RBP16.44■□□□□ 0.22
ARHGEF40-204ENST00000555038 CLPSL1A2RUU4 121 aa16.44■□□□□ 0.22
ARHGEF40-204ENST00000555038 TMEM189A5PLL7 270 aa16.44■□□□□ 0.22
ARHGEF40-204ENST00000555038 IGKV2D-40P01614 121 aaPredicted RBP16.44■□□□□ 0.22
ARHGEF40-204ENST00000555038 IGHG4P01861 327 aa16.44■□□□□ 0.22
ARHGEF40-204ENST00000555038 NTF3P20783 257 aa16.44■□□□□ 0.22
ARHGEF40-204ENST00000555038 LCN12Q6JVE5 192 aa16.44■□□□□ 0.22
ARHGEF40-204ENST00000555038 RNASEKQ6P5S7 137 aaKnown RBP16.44■□□□□ 0.22
ARHGEF40-204ENST00000555038 MRPL53Q96EL3 112 aaKnown RBP16.44■□□□□ 0.22
ARHGEF40-204ENST00000555038 CACNA1BQ00975 2339 aa16.44■□□□□ 0.22
ARHGEF40-204ENST00000555038 M0R2Z0 102 aa16.43■□□□□ 0.22
ARHGEF40-204ENST00000555038 SH2D1AO60880 128 aa16.43■□□□□ 0.22
ARHGEF40-204ENST00000555038 C3orf79P0CE67 100 aa16.43■□□□□ 0.22
ARHGEF40-204ENST00000555038 GATA3P23771 443 aa16.43■□□□□ 0.22
ARHGEF40-204ENST00000555038 BRD3OSQ6XYD6 125 aa16.43■□□□□ 0.22
ARHGEF40-204ENST00000555038 FAM19A2Q8N3H0 131 aa16.43■□□□□ 0.22
ARHGEF40-204ENST00000555038 CLEC5AQ9NY25 188 aa16.43■□□□□ 0.22
ARHGEF40-204ENST00000555038 RNF114Q9Y508 228 aa16.43■□□□□ 0.22
ARHGEF40-204ENST00000555038 U3KQE9 123 aa16.43■□□□□ 0.22
ARHGEF40-204ENST00000555038 IGHV3OR16-10A0A075B7F0 116 aa16.43■□□□□ 0.22
ARHGEF40-204ENST00000555038 ARMS2P0C7Q2 107 aa16.43■□□□□ 0.22
ARHGEF40-204ENST00000555038 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.43■□□□□ 0.22
ARHGEF40-204ENST00000555038 ZNF493Q6ZR52 646 aa16.43■□□□□ 0.22
ARHGEF40-204ENST00000555038 ABCA2Q9BZC7 2435 aa16.42■□□□□ 0.22
ARHGEF40-204ENST00000555038 IGHV3-35A0A0C4DH35 117 aa16.42■□□□□ 0.22
ARHGEF40-204ENST00000555038 A6NDX4 124 aa16.42■□□□□ 0.22
ARHGEF40-204ENST00000555038 MRPL52Q86TS9 123 aaKnown RBP16.42■□□□□ 0.22
ARHGEF40-204ENST00000555038 FAM181BA6NEQ2 426 aa16.41■□□□□ 0.22
ARHGEF40-204ENST00000555038 B4DSR2 109 aa16.41■□□□□ 0.22
ARHGEF40-204ENST00000555038 IGHV4-38-2P0DP08 117 aa16.41■□□□□ 0.22
ARHGEF40-204ENST00000555038 C2orf88Q9BSF0 95 aa16.41■□□□□ 0.22
ARHGEF40-204ENST00000555038 KMT2BQ9UMN6 2715 aaPredicted RBP16.41■□□□□ 0.22
ARHGEF40-204ENST00000555038 IGHG2P01859 326 aa16.41■□□□□ 0.22
ARHGEF40-204ENST00000555038 PMCHL1Q16048 86 aa16.41■□□□□ 0.22
ARHGEF40-204ENST00000555038 URB1-AS1Q96HZ7 61 aa16.41■□□□□ 0.22
ARHGEF40-204ENST00000555038 HIF1ANQ9NWT6 349 aa16.41■□□□□ 0.22
ARHGEF40-204ENST00000555038 TRGV3P03979 118 aa16.4■□□□□ 0.22
ARHGEF40-204ENST00000555038 USMG5Q96IX5 58 aa16.4■□□□□ 0.22
ARHGEF40-204ENST00000555038 ASCL2Q99929 193 aa16.4■□□□□ 0.22
ARHGEF40-204ENST00000555038 MIEN1Q9BRT3 115 aa16.4■□□□□ 0.22
ARHGEF40-204ENST00000555038 IGSF10Q6WRI0 2623 aa16.4■□□□□ 0.22
ARHGEF40-204ENST00000555038 DOPEY1Q5JWR5 2465 aa16.39■□□□□ 0.21
ARHGEF40-204ENST00000555038 SLC25A16P16260 332 aa16.39■□□□□ 0.21
ARHGEF40-204ENST00000555038 VGLL1Q99990 258 aa16.39■□□□□ 0.21
ARHGEF40-204ENST00000555038 AKAP6Q13023 2319 aa16.39■□□□□ 0.21
ARHGEF40-204ENST00000555038 IGHV3OR16-8A0A075B7F1 116 aa16.38■□□□□ 0.21
ARHGEF40-204ENST00000555038 OR5AL1P0C617 328 aa16.38■□□□□ 0.21
ARHGEF40-204ENST00000555038 LINC00614P0C842 121 aa16.38■□□□□ 0.21
ARHGEF40-204ENST00000555038 BTF3P20290 206 aaKnown RBP16.38■□□□□ 0.21
ARHGEF40-204ENST00000555038 CTRLP40313 264 aa16.38■□□□□ 0.21
ARHGEF40-204ENST00000555038 PAM16Q9Y3D7 125 aa16.38■□□□□ 0.21
ARHGEF40-204ENST00000555038 H3BUX3 64 aa16.37■□□□□ 0.21
ARHGEF40-204ENST00000555038 HLA-DMBP28068 263 aa16.37■□□□□ 0.21
ARHGEF40-204ENST00000555038 TDRG1Q3Y452 100 aa16.37■□□□□ 0.21
ARHGEF40-204ENST00000555038 ZNF580Q9UK33 172 aa16.37■□□□□ 0.21
ARHGEF40-204ENST00000555038 FABP5P3A8MUU1 101 aa16.36■□□□□ 0.21
ARHGEF40-204ENST00000555038 NDUFA4O00483 81 aa16.36■□□□□ 0.21
ARHGEF40-204ENST00000555038 PPIFP30405 207 aaKnown RBP16.36■□□□□ 0.21
ARHGEF40-204ENST00000555038 ARL3P36405 182 aa16.36■□□□□ 0.21
ARHGEF40-204ENST00000555038 LYZL1Q6UWQ5 148 aa16.36■□□□□ 0.21
ARHGEF40-204ENST00000555038 ZFYVE26Q68DK2 2539 aa16.36■□□□□ 0.21
ARHGEF40-204ENST00000555038 C2orf70A6NJV1 201 aa16.36■□□□□ 0.21
ARHGEF40-204ENST00000555038 Q8TAT8 98 aa16.36■□□□□ 0.21
ARHGEF40-204ENST00000555038 IGLC6P0CF74 106 aa16.35■□□□□ 0.21
ARHGEF40-204ENST00000555038 IGFL4Q6B9Z1 124 aa16.35■□□□□ 0.21
ARHGEF40-204ENST00000555038 EBLN2Q6P2I7 272 aa16.35■□□□□ 0.21
ARHGEF40-204ENST00000555038 TPPP3Q9BW30 176 aa16.35■□□□□ 0.21
ARHGEF40-204ENST00000555038 PPP1R14DQ9NXH3 145 aa16.35■□□□□ 0.21
ARHGEF40-204ENST00000555038 IGHV1-24A0A0C4DH33 117 aa16.34■□□□□ 0.21
ARHGEF40-204ENST00000555038 C20orf202A1L168 122 aa16.34■□□□□ 0.21
ARHGEF40-204ENST00000555038 M0R143 59 aa16.34■□□□□ 0.21
ARHGEF40-204ENST00000555038 RNF224P0DH78 156 aa16.34■□□□□ 0.21
ARHGEF40-204ENST00000555038 C8orf86Q6ZUL3 223 aa16.34■□□□□ 0.21
ARHGEF40-204ENST00000555038 FER1L6-AS1Q8NA97 138 aa16.34■□□□□ 0.21
ARHGEF40-204ENST00000555038 CRXO43186 299 aaPredicted RBP16.33■□□□□ 0.21
ARHGEF40-204ENST00000555038 ZNF80P51504 273 aaPredicted RBP16.33■□□□□ 0.21
ARHGEF40-204ENST00000555038 LY6EQ16553 131 aa16.33■□□□□ 0.21
ARHGEF40-204ENST00000555038 LINC01559Q495D7 138 aa16.33■□□□□ 0.21
ARHGEF40-204ENST00000555038 KLHDC1Q8N7A1 406 aa16.33■□□□□ 0.21
ARHGEF40-204ENST00000555038 GLMPQ8WWB7 406 aa16.33■□□□□ 0.21
ARHGEF40-204ENST00000555038 TMEM70Q9BUB7 260 aa16.33■□□□□ 0.21
ARHGEF40-204ENST00000555038 U3KQK5 164 aa16.33■□□□□ 0.21
ARHGEF40-204ENST00000555038 CFAP46Q8IYW2 2715 aa16.33■□□□□ 0.2
ARHGEF40-204ENST00000555038 TRAV8-2A0A0B4J237 113 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms