RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 S4R3C0 116 aa4.64□□□□□ -1.67
VIPAS39-204ENST00000553576 CFAP46Q8IYW2 2715 aa4.64□□□□□ -1.67
VIPAS39-204ENST00000553576 USP24Q9UPU5 2620 aa4.63□□□□□ -1.67
VIPAS39-204ENST00000553576 SPG11Q96JI7 2443 aa4.63□□□□□ -1.67
VIPAS39-204ENST00000553576 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.63□□□□□ -1.67
VIPAS39-204ENST00000553576 A0A1B0GXF2 115 aa4.63□□□□□ -1.67
VIPAS39-204ENST00000553576 TMEM89A2RUT3 159 aa4.63□□□□□ -1.67
VIPAS39-204ENST00000553576 RBAKDNA6NC62 111 aa4.63□□□□□ -1.67
VIPAS39-204ENST00000553576 A8MWP6 167 aa4.63□□□□□ -1.67
VIPAS39-204ENST00000553576 SNURFLB1AK76 121 aa4.63□□□□□ -1.67
VIPAS39-204ENST00000553576 H3BTX0 84 aa4.63□□□□□ -1.67
VIPAS39-204ENST00000553576 H3BUX3 64 aa4.63□□□□□ -1.67
VIPAS39-204ENST00000553576 P01737 135 aa4.63□□□□□ -1.67
VIPAS39-204ENST00000553576 IGHV3-23P01764 117 aa4.63□□□□□ -1.67
VIPAS39-204ENST00000553576 IGHG4P01861 327 aa4.63□□□□□ -1.67
VIPAS39-204ENST00000553576 SNRPCP09234 159 aaKnown RBP4.63□□□□□ -1.67
VIPAS39-204ENST00000553576 FABP4P15090 132 aa4.63□□□□□ -1.67
VIPAS39-204ENST00000553576 CRISP2P16562 243 aa4.63□□□□□ -1.67
VIPAS39-204ENST00000553576 CBLN1P23435 193 aa4.63□□□□□ -1.67
VIPAS39-204ENST00000553576 GPR183P32249 361 aa4.63□□□□□ -1.67
VIPAS39-204ENST00000553576 CSN1S1P47710 185 aa4.63□□□□□ -1.67
VIPAS39-204ENST00000553576 SRSF2Q01130 221 aaKnown RBP4.63□□□□□ -1.67
VIPAS39-204ENST00000553576 JOSD1Q15040 202 aaPredicted RBP4.63□□□□□ -1.67
VIPAS39-204ENST00000553576 PYY3Q5JQD4 70 aa4.63□□□□□ -1.67
VIPAS39-204ENST00000553576 FAM209BQ5JX69 171 aa4.63□□□□□ -1.67
VIPAS39-204ENST00000553576 SAPCD1Q5SSQ6 148 aa4.63□□□□□ -1.67
VIPAS39-204ENST00000553576 CLEC19AQ6UXS0 136 aa4.63□□□□□ -1.67
VIPAS39-204ENST00000553576 GOLT1AQ6ZVE7 132 aa4.63□□□□□ -1.67
VIPAS39-204ENST00000553576 TMEM219Q86XT9 240 aa4.63□□□□□ -1.67
VIPAS39-204ENST00000553576 NHLRC2Q8NBF2 726 aa4.63□□□□□ -1.67
VIPAS39-204ENST00000553576 TMEM18Q96B42 140 aa4.63□□□□□ -1.67
VIPAS39-204ENST00000553576 MRPL53Q96EL3 112 aaKnown RBP4.63□□□□□ -1.67
VIPAS39-204ENST00000553576 SLC50A1Q9BRV3 221 aa4.63□□□□□ -1.67
VIPAS39-204ENST00000553576 USP9XQ93008 2570 aaPredicted RBP4.63□□□□□ -1.67
VIPAS39-204ENST00000553576 CSPG4Q6UVK1 2322 aa4.63□□□□□ -1.67
VIPAS39-204ENST00000553576 IGHV3OR16-10A0A075B7F0 116 aa4.62□□□□□ -1.67
VIPAS39-204ENST00000553576 TRAV8-1A0A0A6YYK1 113 aa4.62□□□□□ -1.67
VIPAS39-204ENST00000553576 A0A0G2JLM5 398 aa4.62□□□□□ -1.67
VIPAS39-204ENST00000553576 HIGD1CA8MV81 97 aa4.62□□□□□ -1.67
VIPAS39-204ENST00000553576 NDUFA4O00483 81 aa4.62□□□□□ -1.67
VIPAS39-204ENST00000553576 TRGV3P03979 118 aa4.62□□□□□ -1.67
VIPAS39-204ENST00000553576 FRMD6-AS1P0C7T7 363 aa4.62□□□□□ -1.67
VIPAS39-204ENST00000553576 BLCAPP62952 87 aa4.62□□□□□ -1.67
VIPAS39-204ENST00000553576 CFHR3Q02985 330 aa4.62□□□□□ -1.67
VIPAS39-204ENST00000553576 KLF5Q13887 457 aaPredicted RBP4.62□□□□□ -1.67
VIPAS39-204ENST00000553576 DEFB113Q30KQ7 82 aa4.62□□□□□ -1.67
VIPAS39-204ENST00000553576 CYB5R2Q6BCY4 276 aa4.62□□□□□ -1.67
VIPAS39-204ENST00000553576 RBPMS2Q6ZRY4 209 aaKnown RBP4.62□□□□□ -1.67
VIPAS39-204ENST00000553576 PRNTQ86SH4 94 aa4.62□□□□□ -1.67
VIPAS39-204ENST00000553576 CIARTQ8N365 385 aaPredicted RBP4.62□□□□□ -1.67
VIPAS39-204ENST00000553576 GATD1Q8NB37 220 aa4.62□□□□□ -1.67
VIPAS39-204ENST00000553576 OR5R1Q8NH85 324 aa4.62□□□□□ -1.67
VIPAS39-204ENST00000553576 GTSF1Q8WW33 167 aa4.62□□□□□ -1.67
VIPAS39-204ENST00000553576 NRGNQ92686 78 aa4.62□□□□□ -1.67
VIPAS39-204ENST00000553576 SGK494Q96LW2 274 aa4.62□□□□□ -1.67
VIPAS39-204ENST00000553576 METTL26Q96S19 204 aa4.62□□□□□ -1.67
VIPAS39-204ENST00000553576 NEU1Q99519 415 aa4.62□□□□□ -1.67
VIPAS39-204ENST00000553576 KRTAP3-1Q9BYR8 98 aa4.62□□□□□ -1.67
VIPAS39-204ENST00000553576 NIT2Q9NQR4 276 aa4.62□□□□□ -1.67
VIPAS39-204ENST00000553576 GSN-AS1Q9NRJ2 163 aa4.62□□□□□ -1.67
VIPAS39-204ENST00000553576 TP53TG3Q9ULZ0 132 aa4.62□□□□□ -1.67
VIPAS39-204ENST00000553576 COL12A1Q99715 3063 aa4.62□□□□□ -1.67
VIPAS39-204ENST00000553576 A0A1B0GW15 77 aa4.61□□□□□ -1.67
VIPAS39-204ENST00000553576 SH2D7A6NKC9 451 aaPredicted RBP4.61□□□□□ -1.67
VIPAS39-204ENST00000553576 M0R3E3 92 aa4.61□□□□□ -1.67
VIPAS39-204ENST00000553576 NUPR1O60356 82 aa4.61□□□□□ -1.67
VIPAS39-204ENST00000553576 CA1P00915 261 aaPredicted RBP4.61□□□□□ -1.67
VIPAS39-204ENST00000553576 TGFAP01135 160 aa4.61□□□□□ -1.67
VIPAS39-204ENST00000553576 APCSP02743 223 aa4.61□□□□□ -1.67
VIPAS39-204ENST00000553576 APOHP02749 345 aaPredicted RBP4.61□□□□□ -1.67
VIPAS39-204ENST00000553576 IGHV4-31P0DP07 118 aa4.61□□□□□ -1.67
VIPAS39-204ENST00000553576 CRIP1P50238 77 aa4.61□□□□□ -1.67
VIPAS39-204ENST00000553576 Q6AWC8 147 aa4.61□□□□□ -1.67
VIPAS39-204ENST00000553576 LCN12Q6JVE5 192 aa4.61□□□□□ -1.67
VIPAS39-204ENST00000553576 PRR27Q6MZM9 219 aa4.61□□□□□ -1.67
VIPAS39-204ENST00000553576 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.61□□□□□ -1.67
VIPAS39-204ENST00000553576 Q6YL49 198 aa4.61□□□□□ -1.67
VIPAS39-204ENST00000553576 TMEM256Q8N2U0 113 aa4.61□□□□□ -1.67
VIPAS39-204ENST00000553576 ZC2HC1AQ96GY0 325 aa4.61□□□□□ -1.67
VIPAS39-204ENST00000553576 MS4A10Q96PG2 267 aa4.61□□□□□ -1.67
VIPAS39-204ENST00000553576 PRR25Q96S07 402 aa4.61□□□□□ -1.67
VIPAS39-204ENST00000553576 NDFIP1Q9BT67 221 aa4.61□□□□□ -1.67
VIPAS39-204ENST00000553576 RPH3ALQ9UNE2 315 aa4.61□□□□□ -1.67
VIPAS39-204ENST00000553576 CRYBG3Q68DQ2 2970 aa4.6□□□□□ -1.67
VIPAS39-204ENST00000553576 A0A1W2PS18 150 aa4.6□□□□□ -1.67
VIPAS39-204ENST00000553576 K7EMT4 169 aa4.6□□□□□ -1.67
VIPAS39-204ENST00000553576 CHEK1O14757 476 aa4.6□□□□□ -1.67
VIPAS39-204ENST00000553576 SLPIP03973 132 aa4.6□□□□□ -1.67
VIPAS39-204ENST00000553576 GPX1P07203 203 aa4.6□□□□□ -1.67
VIPAS39-204ENST00000553576 GZMBP10144 247 aa4.6□□□□□ -1.67
VIPAS39-204ENST00000553576 BMI1P35226 326 aa4.6□□□□□ -1.67
VIPAS39-204ENST00000553576 ARL3P36405 182 aa4.6□□□□□ -1.67
VIPAS39-204ENST00000553576 TCL1AP56279 114 aa4.6□□□□□ -1.67
VIPAS39-204ENST00000553576 TPPP2P59282 170 aa4.6□□□□□ -1.67
VIPAS39-204ENST00000553576 KRTAP10-9P60411 292 aa4.6□□□□□ -1.67
VIPAS39-204ENST00000553576 RPS20P60866 119 aaKnown RBP4.6□□□□□ -1.67
VIPAS39-204ENST00000553576 HBBP68871 147 aa4.6□□□□□ -1.67
VIPAS39-204ENST00000553576 LY6EQ16553 131 aa4.6□□□□□ -1.67
VIPAS39-204ENST00000553576 DEFB112Q30KQ8 113 aa4.6□□□□□ -1.67
VIPAS39-204ENST00000553576 PDZD11Q5EBL8 140 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms