RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 MUC6Q6W4X9 2439 aa18.15■□□□□ 0.5
NPAS3-206ENST00000548645 CIDEAO60543 219 aa18.15■□□□□ 0.5
NPAS3-206ENST00000548645 CNIH1O95406 144 aa18.15■□□□□ 0.5
NPAS3-206ENST00000548645 WFDC3Q8IUB2 231 aa18.15■□□□□ 0.5
NPAS3-206ENST00000548645 BCL6BQ8N143 479 aaPredicted RBP18.15■□□□□ 0.5
NPAS3-206ENST00000548645 MALRD1Q5VYJ5 2156 aa18.15■□□□□ 0.5
NPAS3-206ENST00000548645 LOC400499M0QZD8 3231 aa18.15■□□□□ 0.5
NPAS3-206ENST00000548645 COX8CQ7Z4L0 72 aa18.15■□□□□ 0.5
NPAS3-206ENST00000548645 WI2-2373I1.2A0A1W2PRP0 233 aa18.14■□□□□ 0.49
NPAS3-206ENST00000548645 BUB1B-PAK6H3BSN5 160 aa18.14■□□□□ 0.49
NPAS3-206ENST00000548645 MAP1LC3AQ9H492 121 aa18.14■□□□□ 0.49
NPAS3-206ENST00000548645 ZNF318Q5VUA4 2279 aa18.14■□□□□ 0.49
NPAS3-206ENST00000548645 RPL24P83731 157 aaKnown RBP18.14■□□□□ 0.49
NPAS3-206ENST00000548645 C18orf15Q96N68 181 aa18.14■□□□□ 0.49
NPAS3-206ENST00000548645 RNF5Q99942 180 aa18.13■□□□□ 0.49
NPAS3-206ENST00000548645 FXYD2P54710 66 aa18.12■□□□□ 0.49
NPAS3-206ENST00000548645 DLX1P56177 255 aa18.12■□□□□ 0.49
NPAS3-206ENST00000548645 EGR2P11161 476 aaPredicted RBP18.12■□□□□ 0.49
NPAS3-206ENST00000548645 BSPH1Q075Z2 132 aa18.12■□□□□ 0.49
NPAS3-206ENST00000548645 RPEQ96AT9 228 aa18.12■□□□□ 0.49
NPAS3-206ENST00000548645 RAB1BQ9H0U4 201 aa18.12■□□□□ 0.49
NPAS3-206ENST00000548645 PRR25Q96S07 402 aa18.12■□□□□ 0.49
NPAS3-206ENST00000548645 ZMAT4Q9H898 229 aa18.12■□□□□ 0.49
NPAS3-206ENST00000548645 BMI1P35226 326 aa18.11■□□□□ 0.49
NPAS3-206ENST00000548645 ODF1Q14990 250 aa18.11■□□□□ 0.49
NPAS3-206ENST00000548645 CHAC1Q9BUX1 264 aa18.11■□□□□ 0.49
NPAS3-206ENST00000548645 VSTM5A8MXK1 200 aa18.11■□□□□ 0.49
NPAS3-206ENST00000548645 C16orf97H3BN30 126 aa18.11■□□□□ 0.49
NPAS3-206ENST00000548645 IGLC6P0CF74 106 aa18.1■□□□□ 0.49
NPAS3-206ENST00000548645 FCER1GP30273 86 aa18.1■□□□□ 0.49
NPAS3-206ENST00000548645 LEPP41159 167 aa18.1■□□□□ 0.49
NPAS3-206ENST00000548645 PRB3Q04118 309 aaPredicted RBP18.1■□□□□ 0.49
NPAS3-206ENST00000548645 SAMD13Q5VXD3 122 aa18.1■□□□□ 0.49
NPAS3-206ENST00000548645 HHLA3Q9XRX5 114 aa18.1■□□□□ 0.49
NPAS3-206ENST00000548645 SPENQ96T58 3664 aaKnown RBP18.1■□□□□ 0.49
NPAS3-206ENST00000548645 IGKV2-40A0A087WW87 121 aaPredicted RBP18.1■□□□□ 0.49
NPAS3-206ENST00000548645 IGKV2D-26A0A0A0MRZ7 120 aa18.1■□□□□ 0.49
NPAS3-206ENST00000548645 LINC01546A6NGU7 62 aa18.1■□□□□ 0.49
NPAS3-206ENST00000548645 IGKV2D-40P01614 121 aaPredicted RBP18.1■□□□□ 0.49
NPAS3-206ENST00000548645 ROS1P08922 2347 aa18.1■□□□□ 0.49
NPAS3-206ENST00000548645 LINC01559Q495D7 138 aa18.09■□□□□ 0.49
NPAS3-206ENST00000548645 VGLL1Q99990 258 aa18.09■□□□□ 0.49
NPAS3-206ENST00000548645 TEX48A0A1B0GUV7 120 aa18.09■□□□□ 0.49
NPAS3-206ENST00000548645 GNG7O60262 68 aa18.09■□□□□ 0.49
NPAS3-206ENST00000548645 PRSS1P07477 247 aa18.09■□□□□ 0.49
NPAS3-206ENST00000548645 ZNF562Q6V9R5 426 aa18.09■□□□□ 0.49
NPAS3-206ENST00000548645 RNASE6Q93091 150 aaKnown RBP18.09■□□□□ 0.49
NPAS3-206ENST00000548645 NXT2Q9NPJ8 142 aaKnown RBP18.09■□□□□ 0.49
NPAS3-206ENST00000548645 RALYQ9UKM9 306 aaKnown RBP18.09■□□□□ 0.49
NPAS3-206ENST00000548645 ZNF292O60281 2723 aa18.08■□□□□ 0.49
NPAS3-206ENST00000548645 IGKCP01834 107 aa18.08■□□□□ 0.49
NPAS3-206ENST00000548645 DYNLRB1Q9NP97 96 aa18.08■□□□□ 0.48
NPAS3-206ENST00000548645 EVI2AP22794 236 aa18.07■□□□□ 0.48
NPAS3-206ENST00000548645 COX7A1P24310 79 aa18.07■□□□□ 0.48
NPAS3-206ENST00000548645 RNF185Q96GF1 192 aa18.07■□□□□ 0.48
NPAS3-206ENST00000548645 SMPXQ9UHP9 88 aa18.07■□□□□ 0.48
NPAS3-206ENST00000548645 PPIAL4CA0A0B4J2A2 164 aa18.07■□□□□ 0.48
NPAS3-206ENST00000548645 NPIPB5A8MRT5 1133 aa18.07■□□□□ 0.48
NPAS3-206ENST00000548645 PPIAL4GP0DN37 164 aa18.07■□□□□ 0.48
NPAS3-206ENST00000548645 ZFHX4Q86UP3 3567 aa18.06■□□□□ 0.48
NPAS3-206ENST00000548645 RP1L1Q8IWN7 2480 aaPredicted RBP18.06■□□□□ 0.48
NPAS3-206ENST00000548645 TRBV25-1A0A075B6N4 114 aa18.06■□□□□ 0.48
NPAS3-206ENST00000548645 PHLDA1Q8WV24 401 aaPredicted RBP18.06■□□□□ 0.48
NPAS3-206ENST00000548645 TM2D2Q9BX73 214 aa18.06■□□□□ 0.48
NPAS3-206ENST00000548645 TTTY13Q9BZ97 58 aa18.06■□□□□ 0.48
NPAS3-206ENST00000548645 SRSF2Q01130 221 aaKnown RBP18.05■□□□□ 0.48
NPAS3-206ENST00000548645 IGFL3Q6UXB1 125 aa18.05■□□□□ 0.48
NPAS3-206ENST00000548645 A0A1W2PRD5 423 aa18.05■□□□□ 0.48
NPAS3-206ENST00000548645 A0A1W2PRF3 423 aa18.05■□□□□ 0.48
NPAS3-206ENST00000548645 A0A1W2PRM7 423 aa18.05■□□□□ 0.48
NPAS3-206ENST00000548645 K7ERJ3 54 aa18.05■□□□□ 0.48
NPAS3-206ENST00000548645 TMEM11P17152 192 aa18.05■□□□□ 0.48
NPAS3-206ENST00000548645 RPL7P18124 248 aaKnown RBP18.05■□□□□ 0.48
NPAS3-206ENST00000548645 ZNF80P51504 273 aaPredicted RBP18.05■□□□□ 0.48
NPAS3-206ENST00000548645 GFRALQ6UXV0 394 aa18.05■□□□□ 0.48
NPAS3-206ENST00000548645 FAM57AQ8TBR7 257 aa18.05■□□□□ 0.48
NPAS3-206ENST00000548645 NHP2Q9NX24 153 aaKnown RBP18.05■□□□□ 0.48
NPAS3-206ENST00000548645 S4R3C0 116 aa18.05■□□□□ 0.48
NPAS3-206ENST00000548645 GVINP1Q7Z2Y8 2422 aa18.05■□□□□ 0.48
NPAS3-206ENST00000548645 CEP250Q9BV73 2442 aa18.05■□□□□ 0.48
NPAS3-206ENST00000548645 ATP5LO75964 103 aa18.05■□□□□ 0.48
NPAS3-206ENST00000548645 TNFRSF6BO95407 300 aa18.05■□□□□ 0.48
NPAS3-206ENST00000548645 CEND1Q8N111 149 aa18.05■□□□□ 0.48
NPAS3-206ENST00000548645 MSRB1Q9NZV6 116 aa18.05■□□□□ 0.48
NPAS3-206ENST00000548645 DPM2O94777 84 aa18.04■□□□□ 0.48
NPAS3-206ENST00000548645 SCGB1A1P11684 91 aa18.04■□□□□ 0.48
NPAS3-206ENST00000548645 MFAP4P55083 255 aa18.04■□□□□ 0.48
NPAS3-206ENST00000548645 Q8TAT8 98 aa18.04■□□□□ 0.48
NPAS3-206ENST00000548645 CNFNQ9BYD5 112 aa18.04■□□□□ 0.48
NPAS3-206ENST00000548645 SRSF1Q07955 248 aaKnown RBP eCLIP18.04■□□□□ 0.48
NPAS3-206ENST00000548645 FOXC2Q99958 501 aa18.04■□□□□ 0.48
NPAS3-206ENST00000548645 CFAP47Q6ZTR5 3102 aa18.04■□□□□ 0.48
NPAS3-206ENST00000548645 ORM1P02763 201 aa18.03■□□□□ 0.48
NPAS3-206ENST00000548645 FTH1P19P0C7X4 201 aa18.03■□□□□ 0.48
NPAS3-206ENST00000548645 HLA-DRB4P13762 266 aa18.03■□□□□ 0.48
NPAS3-206ENST00000548645 KLF17Q5JT82 389 aaPredicted RBP18.03■□□□□ 0.48
NPAS3-206ENST00000548645 Q6ZS92 163 aa18.03■□□□□ 0.48
NPAS3-206ENST00000548645 HLA-DRB4X5D2U9 266 aa18.03■□□□□ 0.48
NPAS3-206ENST00000548645 GTSCR1Q86UQ5 136 aa18.03■□□□□ 0.48
NPAS3-206ENST00000548645 SIGMAR1Q99720 223 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms