RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585	LOC100506127	A0A0U1RQW1	187 aa		4.21	□□□□□ -1.74
CPSF7-222	ENST00000544585	NBDY	A0A0U1RRE5	68 aa		4.21	□□□□□ -1.74
CPSF7-222	ENST00000544585		A0A1B0GU03	582 aa		4.21	□□□□□ -1.74
CPSF7-222	ENST00000544585		I3L2K1	104 aa		4.21	□□□□□ -1.74
CPSF7-222	ENST00000544585	SULT1C2	O00338	296 aa		4.21	□□□□□ -1.74
CPSF7-222	ENST00000544585	RORC	P51449	518 aa		4.21	□□□□□ -1.74
CPSF7-222	ENST00000544585	SELENOT	P62341	195 aa		4.21	□□□□□ -1.74
CPSF7-222	ENST00000544585	MLLT11	Q13015	90 aa	Predicted RBP	4.21	□□□□□ -1.74
CPSF7-222	ENST00000544585	NDUFA5	Q16718	116 aa		4.21	□□□□□ -1.74
CPSF7-222	ENST00000544585	ACTL10	Q5JWF8	245 aa		4.21	□□□□□ -1.74
CPSF7-222	ENST00000544585	HES5	Q5TA89	166 aa		4.21	□□□□□ -1.74
CPSF7-222	ENST00000544585	FAM24B	Q8N5W8	94 aa		4.21	□□□□□ -1.74
CPSF7-222	ENST00000544585	OR1S2	Q8NGQ3	325 aa		4.21	□□□□□ -1.74
CPSF7-222	ENST00000544585	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.21	□□□□□ -1.74
CPSF7-222	ENST00000544585	SLC25A38	Q96DW6	304 aa		4.21	□□□□□ -1.74
CPSF7-222	ENST00000544585	NARS2	Q96I59	477 aa	Known RBP	4.21	□□□□□ -1.74
CPSF7-222	ENST00000544585	SCRT1	Q9BWW7	348 aa		4.21	□□□□□ -1.74
CPSF7-222	ENST00000544585	ATG5	Q9H1Y0	275 aa		4.21	□□□□□ -1.74
CPSF7-222	ENST00000544585		Q9H3A6	140 aa		4.21	□□□□□ -1.74
CPSF7-222	ENST00000544585	COMMD9	Q9P000	198 aa		4.21	□□□□□ -1.74
CPSF7-222	ENST00000544585	MDFIC	Q9P1T7	246 aa		4.21	□□□□□ -1.74
CPSF7-222	ENST00000544585	ANXA10	Q9UJ72	324 aa		4.21	□□□□□ -1.74
CPSF7-222	ENST00000544585	PRND	Q9UKY0	176 aa		4.21	□□□□□ -1.74
CPSF7-222	ENST00000544585	OR51B2	Q9Y5P1	312 aa		4.21	□□□□□ -1.74
CPSF7-222	ENST00000544585	PUS1	Q9Y606	427 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
CPSF7-222	ENST00000544585	HSPG2	P98160	4391 aa		4.21	□□□□□ -1.74
CPSF7-222	ENST00000544585	PKD1	P98161	4303 aa		4.2	□□□□□ -1.74
CPSF7-222	ENST00000544585	TRAV1-2	A0A0B4J238	106 aa		4.2	□□□□□ -1.74
CPSF7-222	ENST00000544585	KNCN	A6PVL3	124 aa		4.2	□□□□□ -1.74
CPSF7-222	ENST00000544585	F2R	P25116	425 aa		4.2	□□□□□ -1.74
CPSF7-222	ENST00000544585	GNRHR	P30968	328 aa		4.2	□□□□□ -1.74
CPSF7-222	ENST00000544585	GNG2	P59768	71 aa		4.2	□□□□□ -1.74
CPSF7-222	ENST00000544585	B2M	P61769	119 aa		4.2	□□□□□ -1.74
CPSF7-222	ENST00000544585	ERH	P84090	104 aa	Known RBP	4.2	□□□□□ -1.74
CPSF7-222	ENST00000544585	HIGD2B	Q4VC39	106 aa		4.2	□□□□□ -1.74
CPSF7-222	ENST00000544585	C14orf177	Q52M58	125 aa		4.2	□□□□□ -1.74
CPSF7-222	ENST00000544585	GSG1L	Q6UXU4	331 aa		4.2	□□□□□ -1.74
CPSF7-222	ENST00000544585	ZNF705A	Q6ZN79	300 aa	Predicted RBP	4.2	□□□□□ -1.74
CPSF7-222	ENST00000544585	SPATA12	Q7Z6I5	190 aa		4.2	□□□□□ -1.74
CPSF7-222	ENST00000544585	ZNF546	Q86UE3	836 aa		4.2	□□□□□ -1.74
CPSF7-222	ENST00000544585	DCANP1	Q8TF63	244 aa		4.2	□□□□□ -1.74
CPSF7-222	ENST00000544585	AP3S1	Q92572	193 aa		4.2	□□□□□ -1.74
CPSF7-222	ENST00000544585	METTL26	Q96S19	204 aa		4.2	□□□□□ -1.74
CPSF7-222	ENST00000544585	KIR2DL4	Q99706	377 aa		4.2	□□□□□ -1.74
CPSF7-222	ENST00000544585	KRTAP4-9	Q9BYQ8	210 aa		4.2	□□□□□ -1.74
CPSF7-222	ENST00000544585	XCL2	Q9UBD3	114 aa		4.2	□□□□□ -1.74
CPSF7-222	ENST00000544585	SSR3	Q9UNL2	185 aa		4.2	□□□□□ -1.74
CPSF7-222	ENST00000544585	LSM2	Q9Y333	95 aa	Known RBP	4.2	□□□□□ -1.74
CPSF7-222	ENST00000544585	RFNG	Q9Y644	331 aa		4.2	□□□□□ -1.74
CPSF7-222	ENST00000544585	IGHV3-66	A0A0C4DH42	116 aa		4.19	□□□□□ -1.74
CPSF7-222	ENST00000544585	IFITM5	A6NNB3	132 aa		4.19	□□□□□ -1.74
CPSF7-222	ENST00000544585	ZNF705F	A8MVS1	300 aa	Predicted RBP	4.19	□□□□□ -1.74
CPSF7-222	ENST00000544585		H3BMM0	161 aa		4.19	□□□□□ -1.74
CPSF7-222	ENST00000544585	MT-CO2	P00403	227 aa		4.19	□□□□□ -1.74
CPSF7-222	ENST00000544585	KRAS	P01116	189 aa		4.19	□□□□□ -1.74
CPSF7-222	ENST00000544585	PPY	P01298	95 aa		4.19	□□□□□ -1.74
CPSF7-222	ENST00000544585	MB	P02144	154 aa		4.19	□□□□□ -1.74
CPSF7-222	ENST00000544585	ZNF688	P0C7X2	276 aa		4.19	□□□□□ -1.74
CPSF7-222	ENST00000544585	ZNF705D	P0CH99	300 aa	Predicted RBP	4.19	□□□□□ -1.74
CPSF7-222	ENST00000544585	ZNF705B	P0CI00	300 aa	Predicted RBP	4.19	□□□□□ -1.74
CPSF7-222	ENST00000544585	CRYBB3	P26998	211 aa		4.19	□□□□□ -1.74
CPSF7-222	ENST00000544585	LPAR6	P43657	344 aa		4.19	□□□□□ -1.74
CPSF7-222	ENST00000544585	SUB1	P53999	127 aa	Known RBP eCLIP	4.19	□□□□□ -1.74
CPSF7-222	ENST00000544585	EMP1	P54849	157 aa		4.19	□□□□□ -1.74
CPSF7-222	ENST00000544585	CCL18	P55774	89 aa		4.19	□□□□□ -1.74
CPSF7-222	ENST00000544585	SNRPD3	P62318	126 aa	Known RBP	4.19	□□□□□ -1.74
CPSF7-222	ENST00000544585	RPS25	P62851	125 aa	Known RBP	4.19	□□□□□ -1.74
CPSF7-222	ENST00000544585	DHRS2	Q13268	280 aa		4.19	□□□□□ -1.74
CPSF7-222	ENST00000544585	AADACL3	Q5VUY0	350 aa		4.19	□□□□□ -1.74
CPSF7-222	ENST00000544585	SNX29P2	Q8IUI4	249 aa		4.19	□□□□□ -1.74
CPSF7-222	ENST00000544585	TMEM252	Q8N6L7	170 aa		4.19	□□□□□ -1.74
CPSF7-222	ENST00000544585	TMEM230	Q96A57	120 aa		4.19	□□□□□ -1.74
CPSF7-222	ENST00000544585	NDUFB11	Q9NX14	153 aa		4.19	□□□□□ -1.74
CPSF7-222	ENST00000544585	TRAV30	A0A087WSZ9	112 aa		4.18	□□□□□ -1.74
CPSF7-222	ENST00000544585	SNAPIN	O95295	136 aa		4.18	□□□□□ -1.74
CPSF7-222	ENST00000544585	HBE1	P02100	147 aa		4.18	□□□□□ -1.74
CPSF7-222	ENST00000544585	STAG3L2	P0CL84	134 aa		4.18	□□□□□ -1.74
CPSF7-222	ENST00000544585	HTN3	P15516	51 aa		4.18	□□□□□ -1.74
CPSF7-222	ENST00000544585	RAB3B	P20337	219 aa		4.18	□□□□□ -1.74
CPSF7-222	ENST00000544585	TGFBR1	P36897	503 aa		4.18	□□□□□ -1.74
CPSF7-222	ENST00000544585	SNCA	P37840	140 aa		4.18	□□□□□ -1.74
CPSF7-222	ENST00000544585	HSPE1	P61604	102 aa	Known RBP	4.18	□□□□□ -1.74
CPSF7-222	ENST00000544585	FABP5	Q01469	135 aa		4.18	□□□□□ -1.74
CPSF7-222	ENST00000544585		Q1RN00	199 aa		4.18	□□□□□ -1.74
CPSF7-222	ENST00000544585	PSMG4	Q5JS54	123 aa		4.18	□□□□□ -1.74
CPSF7-222	ENST00000544585	FAM222A	Q5U5X8	452 aa		4.18	□□□□□ -1.74
CPSF7-222	ENST00000544585	ZNF818P	Q6ZRF7	136 aa		4.18	□□□□□ -1.74
CPSF7-222	ENST00000544585	CMTM1	Q8IZ96	169 aa		4.18	□□□□□ -1.74
CPSF7-222	ENST00000544585	LYPD1	Q8N2G4	141 aa		4.18	□□□□□ -1.74
CPSF7-222	ENST00000544585	OR51H1	Q8NH63	302 aa		4.18	□□□□□ -1.74
CPSF7-222	ENST00000544585	ZNRF2	Q8NHG8	242 aa		4.18	□□□□□ -1.74
CPSF7-222	ENST00000544585	GTSF1	Q8WW33	167 aa		4.18	□□□□□ -1.74
CPSF7-222	ENST00000544585	FRZB	Q92765	325 aa		4.18	□□□□□ -1.74
CPSF7-222	ENST00000544585	VSIG2	Q96IQ7	327 aa		4.18	□□□□□ -1.74
CPSF7-222	ENST00000544585	TRDV1	A0A1B0GX56	115 aa		4.17	□□□□□ -1.74
CPSF7-222	ENST00000544585	TMEM235	A6NFC5	223 aa		4.17	□□□□□ -1.74
CPSF7-222	ENST00000544585	CORT	O00230	105 aa		4.17	□□□□□ -1.74
CPSF7-222	ENST00000544585	AGPAT2	O15120	278 aa		4.17	□□□□□ -1.74
CPSF7-222	ENST00000544585	RGS5	O15539	181 aa		4.17	□□□□□ -1.74
CPSF7-222	ENST00000544585	PGLYRP1	O75594	196 aa	Predicted RBP	4.17	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms