RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 NPSP0C0P6 89 aa12.27□□□□□ -0.44
BRD9-208ENST00000489816 ATP5L2Q7Z4Y8 100 aa12.27□□□□□ -0.44
BRD9-208ENST00000489816 RNF5Q99942 180 aa12.27□□□□□ -0.44
BRD9-208ENST00000489816 K7EQM0 130 aa12.27□□□□□ -0.45
BRD9-208ENST00000489816 CLEC3BP05452 202 aa12.27□□□□□ -0.45
BRD9-208ENST00000489816 CTSGP08311 255 aa12.27□□□□□ -0.45
BRD9-208ENST00000489816 CT45A10P0DMU9 189 aa12.27□□□□□ -0.45
BRD9-208ENST00000489816 C15orf32Q32M92 178 aa12.27□□□□□ -0.45
BRD9-208ENST00000489816 NPBQ8NG41 125 aa12.27□□□□□ -0.45
BRD9-208ENST00000489816 SMKR1H3BMG3 65 aa12.26□□□□□ -0.45
BRD9-208ENST00000489816 C19orf84I3L1E1 186 aa12.26□□□□□ -0.45
BRD9-208ENST00000489816 SNAI2O43623 268 aa12.26□□□□□ -0.45
BRD9-208ENST00000489816 RELQ04864 619 aaPredicted RBP12.26□□□□□ -0.45
BRD9-208ENST00000489816 ERCC8Q13216 396 aa12.26□□□□□ -0.45
BRD9-208ENST00000489816 ZNF492Q9P255 531 aa12.26□□□□□ -0.45
BRD9-208ENST00000489816 MRPS12O15235 138 aaKnown RBP12.26□□□□□ -0.45
BRD9-208ENST00000489816 EGR2P11161 476 aaPredicted RBP12.26□□□□□ -0.45
BRD9-208ENST00000489816 SAA4P35542 130 aa12.26□□□□□ -0.45
BRD9-208ENST00000489816 KLF5Q13887 457 aaPredicted RBP12.26□□□□□ -0.45
BRD9-208ENST00000489816 TMEM208Q9BTX3 173 aa12.26□□□□□ -0.45
BRD9-208ENST00000489816 TLN2Q9Y4G6 2542 aa12.26□□□□□ -0.45
BRD9-208ENST00000489816 ABCA2Q9BZC7 2435 aa12.26□□□□□ -0.45
BRD9-208ENST00000489816 OR4C46A6NHA9 309 aa12.26□□□□□ -0.45
BRD9-208ENST00000489816 LYZL1Q6UWQ5 148 aa12.26□□□□□ -0.45
BRD9-208ENST00000489816 TMEM70Q9BUB7 260 aa12.26□□□□□ -0.45
BRD9-208ENST00000489816 UQCR10Q9UDW1 63 aa12.26□□□□□ -0.45
BRD9-208ENST00000489816 SOX21Q9Y651 276 aaPredicted RBP12.26□□□□□ -0.45
BRD9-208ENST00000489816 CLEC19AQ6UXS0 136 aa12.25□□□□□ -0.45
BRD9-208ENST00000489816 WFDC3Q8IUB2 231 aa12.25□□□□□ -0.45
BRD9-208ENST00000489816 AMN1Q8IY45 258 aa12.25□□□□□ -0.45
BRD9-208ENST00000489816 WI2-2373I1.2A0A1W2PRP0 233 aa12.25□□□□□ -0.45
BRD9-208ENST00000489816 M0R1W7 72 aa12.25□□□□□ -0.45
BRD9-208ENST00000489816 ATP6V0E1O15342 81 aa12.25□□□□□ -0.45
BRD9-208ENST00000489816 APOHP02749 345 aaPredicted RBP12.25□□□□□ -0.45
BRD9-208ENST00000489816 ZNF80P51504 273 aaPredicted RBP12.25□□□□□ -0.45
BRD9-208ENST00000489816 NHLH1Q02575 133 aa12.25□□□□□ -0.45
BRD9-208ENST00000489816 BRD3OSQ6XYD6 125 aa12.25□□□□□ -0.45
BRD9-208ENST00000489816 LRRK2Q5S007 2527 aa12.25□□□□□ -0.45
BRD9-208ENST00000489816 CSN1S1P47710 185 aa12.24□□□□□ -0.45
BRD9-208ENST00000489816 LOXL1Q08397 574 aaPredicted RBP12.24□□□□□ -0.45
BRD9-208ENST00000489816 Q8N9W7 124 aa12.24□□□□□ -0.45
BRD9-208ENST00000489816 NEU4Q8WWR8 484 aaPredicted RBP12.24□□□□□ -0.45
BRD9-208ENST00000489816 PRAC2D3DTV9 90 aa12.24□□□□□ -0.45
BRD9-208ENST00000489816 RHOGP84095 191 aa12.24□□□□□ -0.45
BRD9-208ENST00000489816 PRSS3P2Q8NHM4 247 aa12.24□□□□□ -0.45
BRD9-208ENST00000489816 NPIPB6E9PJ23 425 aa12.24□□□□□ -0.45
BRD9-208ENST00000489816 SH2D1AO60880 128 aa12.24□□□□□ -0.45
BRD9-208ENST00000489816 MSRB1Q9NZV6 116 aa12.24□□□□□ -0.45
BRD9-208ENST00000489816 LAMTOR2Q9Y2Q5 125 aa12.24□□□□□ -0.45
BRD9-208ENST00000489816 SMAD5-AS1Q9Y6J3 95 aa12.24□□□□□ -0.45
BRD9-208ENST00000489816 J3KRW8 73 aa12.23□□□□□ -0.45
BRD9-208ENST00000489816 NCR2O95944 276 aa12.23□□□□□ -0.45
BRD9-208ENST00000489816 CCDC144NLQ6NUI1 221 aa12.23□□□□□ -0.45
BRD9-208ENST00000489816 PIP4P2Q8N4L2 257 aa12.23□□□□□ -0.45
BRD9-208ENST00000489816 TMEM189A5PLL7 270 aa12.23□□□□□ -0.45
BRD9-208ENST00000489816 OVOL3O00110 214 aa12.23□□□□□ -0.45
BRD9-208ENST00000489816 ORM1P02763 201 aa12.23□□□□□ -0.45
BRD9-208ENST00000489816 IFI27P40305 119 aaPredicted RBP12.23□□□□□ -0.45
BRD9-208ENST00000489816 SMIM12Q96EX1 92 aa12.23□□□□□ -0.45
BRD9-208ENST00000489816 THYN1Q9P016 225 aa12.23□□□□□ -0.45
BRD9-208ENST00000489816 TSPOP30536 169 aa12.22□□□□□ -0.45
BRD9-208ENST00000489816 CT83Q5H943 113 aa12.22□□□□□ -0.45
BRD9-208ENST00000489816 ZFP30Q9Y2G7 519 aa12.22□□□□□ -0.45
BRD9-208ENST00000489816 TRAV9-2A0A087WT02 112 aa12.22□□□□□ -0.45
BRD9-208ENST00000489816 D6R8Y8 96 aa12.22□□□□□ -0.45
BRD9-208ENST00000489816 SYS1-DBNDD2H3BUS1 97 aa12.22□□□□□ -0.45
BRD9-208ENST00000489816 ABCA12Q86UK0 2595 aa12.22□□□□□ -0.45
BRD9-208ENST00000489816 IGSF10Q6WRI0 2623 aa12.22□□□□□ -0.45
BRD9-208ENST00000489816 GNLYP22749 145 aa12.22□□□□□ -0.45
BRD9-208ENST00000489816 Q6ZQT7 251 aa12.22□□□□□ -0.45
BRD9-208ENST00000489816 TTC9CQ8N5M4 171 aa12.22□□□□□ -0.45
BRD9-208ENST00000489816 RABAC1Q9UI14 185 aa12.22□□□□□ -0.45
BRD9-208ENST00000489816 IGKV3-7A0A075B6H7 116 aa12.21□□□□□ -0.45
BRD9-208ENST00000489816 HAX1O00165 279 aa12.21□□□□□ -0.45
BRD9-208ENST00000489816 RIGQ13278 110 aa12.21□□□□□ -0.45
BRD9-208ENST00000489816 OR8A1Q8NGG7 326 aa12.21□□□□□ -0.45
BRD9-208ENST00000489816 PAX2Q02962 417 aa12.21□□□□□ -0.46
BRD9-208ENST00000489816 TWIST1Q15672 202 aa12.21□□□□□ -0.46
BRD9-208ENST00000489816 ZNF124Q15973 351 aa12.21□□□□□ -0.46
BRD9-208ENST00000489816 KLHDC1Q8N7A1 406 aa12.21□□□□□ -0.46
BRD9-208ENST00000489816 GFRA4Q9GZZ7 299 aa12.21□□□□□ -0.46
BRD9-208ENST00000489816 SIRPDQ9H106 197 aa12.21□□□□□ -0.46
BRD9-208ENST00000489816 TRAV30A0A087WSZ9 112 aa12.2□□□□□ -0.46
BRD9-208ENST00000489816 GAS8-AS1O95177 125 aa12.2□□□□□ -0.46
BRD9-208ENST00000489816 UCNP55089 124 aa12.2□□□□□ -0.46
BRD9-208ENST00000489816 M0QZK8 103 aa12.2□□□□□ -0.46
BRD9-208ENST00000489816 SPRY2O43597 315 aa12.2□□□□□ -0.46
BRD9-208ENST00000489816 RPL7P18124 248 aaKnown RBP12.2□□□□□ -0.46
BRD9-208ENST00000489816 AP5S1Q9NUS5 200 aa12.2□□□□□ -0.46
BRD9-208ENST00000489816 DEFB1P60022 68 aa12.2□□□□□ -0.46
BRD9-208ENST00000489816 PRR25Q96S07 402 aa12.2□□□□□ -0.46
BRD9-208ENST00000489816 SRSF8Q9BRL6 282 aaKnown RBP12.2□□□□□ -0.46
BRD9-208ENST00000489816 PTPN13Q12923 2485 aa12.19□□□□□ -0.46
BRD9-208ENST00000489816 IGHG4P01861 327 aa12.19□□□□□ -0.46
BRD9-208ENST00000489816 LY6EQ16553 131 aa12.19□□□□□ -0.46
BRD9-208ENST00000489816 COL5A1-AS1Q5SY13 56 aa12.19□□□□□ -0.46
BRD9-208ENST00000489816 LCNL1Q6ZST4 164 aa12.19□□□□□ -0.46
BRD9-208ENST00000489816 FA2HQ7L5A8 372 aa12.19□□□□□ -0.46
BRD9-208ENST00000489816 Q8N6K4 173 aa12.19□□□□□ -0.46
BRD9-208ENST00000489816 NDFIP1Q9BT67 221 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms