RNA–Protein interactions for RNA: ENST00000485454.1

SFPQ-209, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 339 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-209ENST00000485454 LYRM1O43325 122 aa-0.6□□□□□ -2.51
SFPQ-209ENST00000485454 IFNA16P05015 189 aa-0.6□□□□□ -2.51
SFPQ-209ENST00000485454 RPS3P23396 243 aaKnown RBP eCLIP-0.6□□□□□ -2.51
SFPQ-209ENST00000485454 ETV6P41212 452 aa-0.6□□□□□ -2.51
SFPQ-209ENST00000485454 SERPINB9P50453 376 aa-0.6□□□□□ -2.51
SFPQ-209ENST00000485454 HIST1H3AP68431 136 aa-0.6□□□□□ -2.51
SFPQ-209ENST00000485454 H3F3AP84243 136 aa-0.6□□□□□ -2.51
SFPQ-209ENST00000485454 COX6A2Q02221 97 aa-0.6□□□□□ -2.51
SFPQ-209ENST00000485454 TMED1Q13445 227 aa-0.6□□□□□ -2.51
SFPQ-209ENST00000485454 ESPL1Q14674 2120 aa-0.6□□□□□ -2.51
SFPQ-209ENST00000485454 KRTAP19-7Q3SYF9 63 aa-0.6□□□□□ -2.51
SFPQ-209ENST00000485454 TMEM14EPQ6UXP3 125 aa-0.6□□□□□ -2.51
SFPQ-209ENST00000485454 IDO2Q6ZQW0 420 aa-0.6□□□□□ -2.51
SFPQ-209ENST00000485454 DDI1Q8WTU0 396 aa-0.6□□□□□ -2.51
SFPQ-209ENST00000485454 CHCHD1Q96BP2 118 aaKnown RBP-0.6□□□□□ -2.51
SFPQ-209ENST00000485454 TRIM4Q9C037 500 aa-0.6□□□□□ -2.51
SFPQ-209ENST00000485454 UCK1Q9HA47 277 aa-0.6□□□□□ -2.51
SFPQ-209ENST00000485454 ATP6V1DQ9Y5K8 247 aa-0.6□□□□□ -2.51
SFPQ-209ENST00000485454 KMT2AQ03164 3969 aa-0.61□□□□□ -2.51
SFPQ-209ENST00000485454 UNC13BO14795 1591 aa-0.61□□□□□ -2.51
SFPQ-209ENST00000485454 TRAV4A0A0B4J268 109 aa-0.61□□□□□ -2.51
SFPQ-209ENST00000485454 MCRIP1C9JLW8 97 aa-0.61□□□□□ -2.51
SFPQ-209ENST00000485454 TAX1BP3O14907 124 aa-0.61□□□□□ -2.51
SFPQ-209ENST00000485454 PDE6DO43924 150 aa-0.61□□□□□ -2.51
SFPQ-209ENST00000485454 IFNA5P01569 189 aa-0.61□□□□□ -2.51
SFPQ-209ENST00000485454 IFNA4P05014 189 aa-0.61□□□□□ -2.51
SFPQ-209ENST00000485454 MIR22HGQ0VDD5 57 aa-0.61□□□□□ -2.51
SFPQ-209ENST00000485454 Q5XG85 94 aa-0.61□□□□□ -2.51
SFPQ-209ENST00000485454 FOXI2Q6ZQN5 318 aa-0.61□□□□□ -2.51
SFPQ-209ENST00000485454 PARVBQ9HBI1 364 aa-0.61□□□□□ -2.51
SFPQ-209ENST00000485454 UQCC1Q9NVA1 299 aa-0.61□□□□□ -2.51
SFPQ-209ENST00000485454 TANC1Q9C0D5 1861 aa-0.61□□□□□ -2.51
SFPQ-209ENST00000485454 ZNF292O60281 2723 aa-0.61□□□□□ -2.51
SFPQ-209ENST00000485454 AKAP6Q13023 2319 aa-0.61□□□□□ -2.51
SFPQ-209ENST00000485454 ABCA1O95477 2261 aa-0.62□□□□□ -2.51
SFPQ-209ENST00000485454 PIK3C2GO75747 1445 aa-0.62□□□□□ -2.51
SFPQ-209ENST00000485454 COL6A3P12111 3177 aa-0.62□□□□□ -2.51
SFPQ-209ENST00000485454 SPAG17Q6Q759 2223 aa-0.62□□□□□ -2.51
SFPQ-209ENST00000485454 C9orf170A2RU37 121 aa-0.62□□□□□ -2.51
SFPQ-209ENST00000485454 SMIM23A6NLE4 172 aa-0.62□□□□□ -2.51
SFPQ-209ENST00000485454 PIAS1O75925 651 aa-0.62□□□□□ -2.51
SFPQ-209ENST00000485454 IFNA7P01567 189 aa-0.62□□□□□ -2.51
SFPQ-209ENST00000485454 GYPBP06028 91 aa-0.62□□□□□ -2.51
SFPQ-209ENST00000485454 DYNLT3P51808 116 aa-0.62□□□□□ -2.51
SFPQ-209ENST00000485454 EDDM3AQ14507 147 aa-0.62□□□□□ -2.51
SFPQ-209ENST00000485454 DEFB132Q7Z7B7 95 aa-0.62□□□□□ -2.51
SFPQ-209ENST00000485454 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.62□□□□□ -2.51
SFPQ-209ENST00000485454 OR4K15Q8NH41 348 aa-0.62□□□□□ -2.51
SFPQ-209ENST00000485454 PPTC7Q8NI37 304 aa-0.62□□□□□ -2.51
SFPQ-209ENST00000485454 GNPDA2Q8TDQ7 276 aa-0.62□□□□□ -2.51
SFPQ-209ENST00000485454 MALSU1Q96EH3 234 aa-0.62□□□□□ -2.51
SFPQ-209ENST00000485454 ARL5BQ96KC2 179 aa-0.62□□□□□ -2.51
SFPQ-209ENST00000485454 AP1S3Q96PC3 154 aa-0.62□□□□□ -2.51
SFPQ-209ENST00000485454 LIMD2Q9BT23 127 aa-0.62□□□□□ -2.51
SFPQ-209ENST00000485454 CST11Q9H112 138 aa-0.62□□□□□ -2.51
SFPQ-209ENST00000485454 APC2O95996 2303 aa-0.63□□□□□ -2.51
SFPQ-209ENST00000485454 DOCK4Q8N1I0 1966 aa-0.63□□□□□ -2.51
SFPQ-209ENST00000485454 NINQ8N4C6 2090 aa-0.63□□□□□ -2.51
SFPQ-209ENST00000485454 FAT1Q14517 4588 aa-0.63□□□□□ -2.51
SFPQ-209ENST00000485454 LPAP08519 4548 aa-0.63□□□□□ -2.51
SFPQ-209ENST00000485454 A0A096LNT2 108 aa-0.63□□□□□ -2.51
SFPQ-209ENST00000485454 ERP29P30040 261 aaKnown RBP-0.63□□□□□ -2.51
SFPQ-209ENST00000485454 DEFA3P59666 94 aa-0.63□□□□□ -2.51
SFPQ-209ENST00000485454 KLRD1Q13241 179 aa-0.63□□□□□ -2.51
SFPQ-209ENST00000485454 ZNF56Q15929 161 aa-0.63□□□□□ -2.51
SFPQ-209ENST00000485454 LINC00208Q96KT6 92 aa-0.63□□□□□ -2.51
SFPQ-209ENST00000485454 ZNF714Q96N38 554 aa-0.63□□□□□ -2.51
SFPQ-209ENST00000485454 PRR15LQ9BU68 103 aa-0.63□□□□□ -2.51
SFPQ-209ENST00000485454 MAP1LC3BQ9GZQ8 125 aa-0.63□□□□□ -2.51
SFPQ-209ENST00000485454 CACYBPQ9HB71 228 aaKnown RBP-0.63□□□□□ -2.51
SFPQ-209ENST00000485454 MRPL35Q9NZE8 188 aaKnown RBP-0.63□□□□□ -2.51
SFPQ-209ENST00000485454 NAT8BQ9UHF3 227 aa-0.63□□□□□ -2.51
SFPQ-209ENST00000485454 PTPRQQ9UMZ3 2332 aa-0.63□□□□□ -2.51
SFPQ-209ENST00000485454 NCAPD3P42695 1498 aa-0.63□□□□□ -2.51
SFPQ-209ENST00000485454 NIPBLQ6KC79 2804 aaeCLIP-0.63□□□□□ -2.51
SFPQ-209ENST00000485454 NISCHQ9Y2I1 1504 aa-0.64□□□□□ -2.51
SFPQ-209ENST00000485454 TRPM1Q7Z4N2 1603 aa-0.64□□□□□ -2.51
SFPQ-209ENST00000485454 F5P12259 2224 aa-0.64□□□□□ -2.51
SFPQ-209ENST00000485454 MYCBP2O75592 4640 aa-0.64□□□□□ -2.51
SFPQ-209ENST00000485454 CHD9Q3L8U1 2897 aa-0.64□□□□□ -2.51
SFPQ-209ENST00000485454 A0A087WUJ7 227 aa-0.64□□□□□ -2.51
SFPQ-209ENST00000485454 TMEM256-PLSCR3K7ERE1 68 aa-0.64□□□□□ -2.51
SFPQ-209ENST00000485454 TPM3P06753 285 aa-0.64□□□□□ -2.51
SFPQ-209ENST00000485454 SPRR2DP22532 72 aa-0.64□□□□□ -2.51
SFPQ-209ENST00000485454 AESQ08117 197 aa-0.64□□□□□ -2.51
SFPQ-209ENST00000485454 FXYD3Q14802 87 aa-0.64□□□□□ -2.51
SFPQ-209ENST00000485454 GOLT1AQ6ZVE7 132 aa-0.64□□□□□ -2.51
SFPQ-209ENST00000485454 IFT20Q8IY31 132 aa-0.64□□□□□ -2.51
SFPQ-209ENST00000485454 OTUD6BQ8N6M0 293 aa-0.64□□□□□ -2.51
SFPQ-209ENST00000485454 RNASE7Q9H1E1 156 aaKnown RBP-0.64□□□□□ -2.51
SFPQ-209ENST00000485454 ENY2Q9NPA8 101 aa-0.64□□□□□ -2.51
SFPQ-209ENST00000485454 AFDNP55196 1824 aaKnown RBP-0.64□□□□□ -2.51
SFPQ-209ENST00000485454 CHD8Q9HCK8 2581 aa-0.64□□□□□ -2.51
SFPQ-209ENST00000485454 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.64□□□□□ -2.51
SFPQ-209ENST00000485454 CTTNBP2Q8WZ74 1663 aa-0.65□□□□□ -2.51
SFPQ-209ENST00000485454 LAMC3Q9Y6N6 1575 aa-0.65□□□□□ -2.51
SFPQ-209ENST00000485454 MAP2P11137 1827 aaKnown RBP-0.65□□□□□ -2.51
SFPQ-209ENST00000485454 TRAV5A0A0B4J249 113 aa-0.65□□□□□ -2.51
SFPQ-209ENST00000485454 CST8O60676 142 aa-0.65□□□□□ -2.51
SFPQ-209ENST00000485454 KLKP1Q107X0 134 aa-0.65□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms