RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 RPS3P23396 243 aaKnown RBP eCLIP-1.08□□□□□ -2.58
PRPF40A-207ENST00000471701 OTUD6BQ8N6M0 293 aa-1.08□□□□□ -2.58
PRPF40A-207ENST00000471701 DDI1Q8WTU0 396 aa-1.08□□□□□ -2.58
PRPF40A-207ENST00000471701 ZNF714Q96N38 554 aa-1.08□□□□□ -2.58
PRPF40A-207ENST00000471701 IMUPQ9GZP8 106 aa-1.08□□□□□ -2.58
PRPF40A-207ENST00000471701 PARVBQ9HBI1 364 aa-1.08□□□□□ -2.58
PRPF40A-207ENST00000471701 NAT8BQ9UHF3 227 aa-1.08□□□□□ -2.58
PRPF40A-207ENST00000471701 TANC1Q9C0D5 1861 aa-1.09□□□□□ -2.58
PRPF40A-207ENST00000471701 IGHV3-30P01768 117 aa-1.09□□□□□ -2.58
PRPF40A-207ENST00000471701 CXCL1P09341 107 aa-1.09□□□□□ -2.58
PRPF40A-207ENST00000471701 IGHV3-30-5P0DP03 117 aa-1.09□□□□□ -2.58
PRPF40A-207ENST00000471701 ARPP19P56211 112 aa-1.09□□□□□ -2.58
PRPF40A-207ENST00000471701 MYL6P60660 151 aa-1.09□□□□□ -2.58
PRPF40A-207ENST00000471701 FXYD3Q14802 87 aa-1.09□□□□□ -2.58
PRPF40A-207ENST00000471701 GNPDA2Q8TDQ7 276 aa-1.09□□□□□ -2.58
PRPF40A-207ENST00000471701 CCDC42Q96M95 316 aa-1.09□□□□□ -2.58
PRPF40A-207ENST00000471701 CACYBPQ9HB71 228 aaKnown RBP-1.09□□□□□ -2.58
PRPF40A-207ENST00000471701 CTNNBIP1Q9NSA3 81 aaPredicted RBP-1.09□□□□□ -2.58
PRPF40A-207ENST00000471701 ASB4Q9Y574 426 aa-1.09□□□□□ -2.58
PRPF40A-207ENST00000471701 UBR2Q8IWV8 1755 aa-1.09□□□□□ -2.58
PRPF40A-207ENST00000471701 FLNAP21333 2647 aaKnown RBP-1.1□□□□□ -2.59
PRPF40A-207ENST00000471701 NBDYA0A0U1RRE5 68 aa-1.1□□□□□ -2.59
PRPF40A-207ENST00000471701 RPS17P08708 135 aaKnown RBP-1.1□□□□□ -2.59
PRPF40A-207ENST00000471701 NEDD8Q15843 81 aa-1.1□□□□□ -2.59
PRPF40A-207ENST00000471701 TMEM97Q5BJF2 176 aa-1.1□□□□□ -2.59
PRPF40A-207ENST00000471701 C5orf17Q8NAS9 161 aa-1.1□□□□□ -2.59
PRPF40A-207ENST00000471701 CST11Q9H112 138 aa-1.1□□□□□ -2.59
PRPF40A-207ENST00000471701 NISCHQ9Y2I1 1504 aa-1.1□□□□□ -2.59
PRPF40A-207ENST00000471701 DSPPQ9NZW4 1301 aa-1.11□□□□□ -2.59
PRPF40A-207ENST00000471701 ZFYVE9O95405 1425 aa-1.11□□□□□ -2.59
PRPF40A-207ENST00000471701 FXYD1O00168 92 aa-1.11□□□□□ -2.59
PRPF40A-207ENST00000471701 IFNA7P01567 189 aa-1.11□□□□□ -2.59
PRPF40A-207ENST00000471701 IFITM1P13164 125 aa-1.11□□□□□ -2.59
PRPF40A-207ENST00000471701 NFYBP25208 207 aa-1.11□□□□□ -2.59
PRPF40A-207ENST00000471701 TMBIM6P55061 237 aa-1.11□□□□□ -2.59
PRPF40A-207ENST00000471701 COTL1Q14019 142 aa-1.11□□□□□ -2.59
PRPF40A-207ENST00000471701 DIAPH2-AS1Q14236 149 aa-1.11□□□□□ -2.59
PRPF40A-207ENST00000471701 C5orf56Q8N8D9 126 aa-1.11□□□□□ -2.59
PRPF40A-207ENST00000471701 SRRM2Q9UQ35 2752 aaKnown RBP-1.11□□□□□ -2.59
PRPF40A-207ENST00000471701 FAM208BQ5VWN6 2430 aa-1.11□□□□□ -2.59
PRPF40A-207ENST00000471701 RER1O15258 196 aa-1.12□□□□□ -2.59
PRPF40A-207ENST00000471701 PIAS1O75925 651 aa-1.12□□□□□ -2.59
PRPF40A-207ENST00000471701 INSL3P51460 131 aa-1.12□□□□□ -2.59
PRPF40A-207ENST00000471701 LSM6P62312 80 aaKnown RBP-1.12□□□□□ -2.59
PRPF40A-207ENST00000471701 LINC00269Q8N2A0 174 aa-1.12□□□□□ -2.59
PRPF40A-207ENST00000471701 ADGRL3Q9HAR2 1447 aa-1.13□□□□□ -2.59
PRPF40A-207ENST00000471701 LOC101927531A0A1B0GV80 90 aa-1.13□□□□□ -2.59
PRPF40A-207ENST00000471701 HMGB3O15347 200 aaKnown RBP-1.13□□□□□ -2.59
PRPF40A-207ENST00000471701 TCRBP04435 133 aa-1.13□□□□□ -2.59
PRPF40A-207ENST00000471701 VMA21Q3ZAQ7 101 aa-1.13□□□□□ -2.59
PRPF40A-207ENST00000471701 TNXBP22105 4242 aa-1.13□□□□□ -2.59
PRPF40A-207ENST00000471701 ATG2AQ2TAZ0 1938 aa-1.13□□□□□ -2.59
PRPF40A-207ENST00000471701 BANF1O75531 89 aa-1.14□□□□□ -2.59
PRPF40A-207ENST00000471701 TAF1AQ15573 450 aaPredicted RBP-1.14□□□□□ -2.59
PRPF40A-207ENST00000471701 CSAG1Q6PB30 78 aa-1.14□□□□□ -2.59
PRPF40A-207ENST00000471701 GOLT1AQ6ZVE7 132 aa-1.14□□□□□ -2.59
PRPF40A-207ENST00000471701 SIGMAR1Q99720 223 aa-1.14□□□□□ -2.59
PRPF40A-207ENST00000471701 HECTD4Q9Y4D8 3996 aa-1.14□□□□□ -2.59
PRPF40A-207ENST00000471701 AFDNP55196 1824 aaKnown RBP-1.15□□□□□ -2.59
PRPF40A-207ENST00000471701 UNC13BO14795 1591 aa-1.15□□□□□ -2.59
PRPF40A-207ENST00000471701 A0A096LNT2 108 aa-1.15□□□□□ -2.59
PRPF40A-207ENST00000471701 CETN3O15182 167 aa-1.15□□□□□ -2.59
PRPF40A-207ENST00000471701 LYRM1O43325 122 aa-1.15□□□□□ -2.59
PRPF40A-207ENST00000471701 ETV6P41212 452 aa-1.15□□□□□ -2.59
PRPF40A-207ENST00000471701 SNRPD3P62318 126 aaKnown RBP-1.15□□□□□ -2.59
PRPF40A-207ENST00000471701 MSMO1Q15800 293 aa-1.15□□□□□ -2.59
PRPF40A-207ENST00000471701 MAP1LC3BQ9GZQ8 125 aa-1.15□□□□□ -2.59
PRPF40A-207ENST00000471701 TRPM7Q96QT4 1865 aa-1.16□□□□□ -2.59
PRPF40A-207ENST00000471701 CSMD3Q7Z407 3707 aa-1.16□□□□□ -2.59
PRPF40A-207ENST00000471701 NCAPD3P42695 1498 aa-1.16□□□□□ -2.59
PRPF40A-207ENST00000471701 KIAA1549LQ6ZVL6 1849 aa-1.16□□□□□ -2.6
PRPF40A-207ENST00000471701 RPP14O95059 124 aaKnown RBP-1.16□□□□□ -2.6
PRPF40A-207ENST00000471701 IFNA4P05014 189 aa-1.16□□□□□ -2.6
PRPF40A-207ENST00000471701 PHBP35232 272 aa-1.16□□□□□ -2.6
PRPF40A-207ENST00000471701 COX6A2Q02221 97 aa-1.16□□□□□ -2.6
PRPF40A-207ENST00000471701 ENY2Q9NPA8 101 aa-1.16□□□□□ -2.6
PRPF40A-207ENST00000471701 ANK1P16157 1881 aa-1.16□□□□□ -2.6
PRPF40A-207ENST00000471701 ESPL1Q14674 2120 aa-1.16□□□□□ -2.6
PRPF40A-207ENST00000471701 MAP2P11137 1827 aaKnown RBP-1.17□□□□□ -2.6
PRPF40A-207ENST00000471701 C1QBP02746 253 aa-1.17□□□□□ -2.6
PRPF40A-207ENST00000471701 CYBAP13498 195 aa-1.17□□□□□ -2.6
PRPF40A-207ENST00000471701 DEFB132Q7Z7B7 95 aa-1.17□□□□□ -2.6
PRPF40A-207ENST00000471701 IFT20Q8IY31 132 aa-1.17□□□□□ -2.6
PRPF40A-207ENST00000471701 FAM216BQ8N7L0 139 aa-1.17□□□□□ -2.6
PRPF40A-207ENST00000471701 GRPEL2Q8TAA5 225 aa-1.17□□□□□ -2.6
PRPF40A-207ENST00000471701 SMIM23A6NLE4 172 aa-1.18□□□□□ -2.6
PRPF40A-207ENST00000471701 HIST1H2BKO60814 126 aa-1.18□□□□□ -2.6
PRPF40A-207ENST00000471701 GYPBP06028 91 aa-1.18□□□□□ -2.6
PRPF40A-207ENST00000471701 HIST1H2BJP06899 126 aa-1.18□□□□□ -2.6
PRPF40A-207ENST00000471701 HACD4Q5VWC8 232 aa-1.18□□□□□ -2.6
PRPF40A-207ENST00000471701 OR10X1Q8NGY0 326 aa-1.18□□□□□ -2.6
PRPF40A-207ENST00000471701 MRPL35Q9NZE8 188 aaKnown RBP-1.18□□□□□ -2.6
PRPF40A-207ENST00000471701 FAM32AQ9Y421 112 aaKnown RBP-1.18□□□□□ -2.6
PRPF40A-207ENST00000471701 DCHS2Q6V1P9 2916 aa-1.18□□□□□ -2.6
PRPF40A-207ENST00000471701 PKD1L1Q8TDX9 2849 aa-1.18□□□□□ -2.6
PRPF40A-207ENST00000471701 CFAP53Q96M91 514 aa-1.19□□□□□ -2.6
PRPF40A-207ENST00000471701 AP1S3Q96PC3 154 aa-1.19□□□□□ -2.6
PRPF40A-207ENST00000471701 EFCAB11Q9BUY7 163 aa-1.19□□□□□ -2.6
PRPF40A-207ENST00000471701 TMEM14BQ9NUH8 114 aa-1.19□□□□□ -2.6
PRPF40A-207ENST00000471701 ABCA1O95477 2261 aa-1.19□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms