RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 ADGRL3Q9HAR2 1447 aa-0.37□□□□□ -2.47
SMC4-207ENST00000467263 A0A0J9YY99 117 aa-0.37□□□□□ -2.47
SMC4-207ENST00000467263 IFNA4P05014 189 aa-0.37□□□□□ -2.47
SMC4-207ENST00000467263 CAV3P56539 151 aa-0.37□□□□□ -2.47
SMC4-207ENST00000467263 MSMO1Q15800 293 aa-0.37□□□□□ -2.47
SMC4-207ENST00000467263 MAP1LC3BQ9GZQ8 125 aa-0.37□□□□□ -2.47
SMC4-207ENST00000467263 UNC79Q9P2D8 2635 aa-0.37□□□□□ -2.47
SMC4-207ENST00000467263 LYRM1O43325 122 aa-0.38□□□□□ -2.47
SMC4-207ENST00000467263 TRGC2P03986 189 aa-0.38□□□□□ -2.47
SMC4-207ENST00000467263 ERVS71-1P61550 626 aa-0.38□□□□□ -2.47
SMC4-207ENST00000467263 ZCCHC23Q6ZST2 131 aa-0.38□□□□□ -2.47
SMC4-207ENST00000467263 MALSU1Q96EH3 234 aa-0.38□□□□□ -2.47
SMC4-207ENST00000467263 CST11Q9H112 138 aa-0.38□□□□□ -2.47
SMC4-207ENST00000467263 ARL2BPQ9Y2Y0 163 aa-0.38□□□□□ -2.47
SMC4-207ENST00000467263 HIVEP3Q5T1R4 2406 aa-0.39□□□□□ -2.47
SMC4-207ENST00000467263 HIST1H2BKO60814 126 aa-0.39□□□□□ -2.47
SMC4-207ENST00000467263 NDUFC2O95298 119 aa-0.39□□□□□ -2.47
SMC4-207ENST00000467263 HIST1H2BJP06899 126 aa-0.39□□□□□ -2.47
SMC4-207ENST00000467263 DIAPH2-AS1Q14236 149 aa-0.39□□□□□ -2.47
SMC4-207ENST00000467263 VMA21Q3ZAQ7 101 aa-0.39□□□□□ -2.47
SMC4-207ENST00000467263 C10orf99Q6UWK7 81 aa-0.39□□□□□ -2.47
SMC4-207ENST00000467263 DGCR14Q96DF8 476 aaKnown RBP-0.39□□□□□ -2.47
SMC4-207ENST00000467263 OR2J1Q9GZK6 312 aa-0.39□□□□□ -2.47
SMC4-207ENST00000467263 TRPM1Q7Z4N2 1603 aa-0.39□□□□□ -2.47
SMC4-207ENST00000467263 SULT1C4O75897 302 aa-0.4□□□□□ -2.47
SMC4-207ENST00000467263 SPINK13Q1W4C9 94 aa-0.4□□□□□ -2.47
SMC4-207ENST00000467263 GLYATL3Q5SZD4 288 aa-0.4□□□□□ -2.47
SMC4-207ENST00000467263 LPAR5Q9H1C0 372 aa-0.4□□□□□ -2.47
SMC4-207ENST00000467263 ARMC1Q9NVT9 282 aa-0.4□□□□□ -2.47
SMC4-207ENST00000467263 NAT8BQ9UHF3 227 aa-0.4□□□□□ -2.47
SMC4-207ENST00000467263 FRMPD1Q5SYB0 1578 aa-0.4□□□□□ -2.47
SMC4-207ENST00000467263 POLQO75417 2590 aa-0.41□□□□□ -2.47
SMC4-207ENST00000467263 PRORSD1PA6NEY8 169 aa-0.41□□□□□ -2.48
SMC4-207ENST00000467263 GNG5P63218 68 aa-0.41□□□□□ -2.48
SMC4-207ENST00000467263 NEDD8Q15843 81 aa-0.41□□□□□ -2.48
SMC4-207ENST00000467263 AKIRIN2Q53H80 203 aa-0.41□□□□□ -2.48
SMC4-207ENST00000467263 GPX7Q96SL4 187 aaPredicted RBP-0.41□□□□□ -2.48
SMC4-207ENST00000467263 CACNA1CQ13936 2221 aa-0.42□□□□□ -2.48
SMC4-207ENST00000467263 G3V2T6 193 aa-0.42□□□□□ -2.48
SMC4-207ENST00000467263 SPINK1P00995 79 aa-0.42□□□□□ -2.48
SMC4-207ENST00000467263 IFNA14P01570 189 aa-0.42□□□□□ -2.48
SMC4-207ENST00000467263 RPL37P61927 97 aaKnown RBP-0.42□□□□□ -2.48
SMC4-207ENST00000467263 XAF1Q6GPH4 301 aa-0.42□□□□□ -2.48
SMC4-207ENST00000467263 FAM216BQ8N7L0 139 aa-0.42□□□□□ -2.48
SMC4-207ENST00000467263 C5orf17Q8NAS9 161 aa-0.42□□□□□ -2.48
SMC4-207ENST00000467263 PHB2Q99623 299 aa-0.42□□□□□ -2.48
SMC4-207ENST00000467263 PAIP2Q9BPZ3 127 aaKnown RBP-0.42□□□□□ -2.48
SMC4-207ENST00000467263 CTTNBP2Q8WZ74 1663 aa-0.43□□□□□ -2.48
SMC4-207ENST00000467263 NISCHQ9Y2I1 1504 aa-0.43□□□□□ -2.48
SMC4-207ENST00000467263 TRAV5A0A0B4J249 113 aa-0.43□□□□□ -2.48
SMC4-207ENST00000467263 A6NN06 94 aa-0.43□□□□□ -2.48
SMC4-207ENST00000467263 AIPO00170 330 aa-0.43□□□□□ -2.48
SMC4-207ENST00000467263 CTXN2P0C2S0 81 aa-0.43□□□□□ -2.48
SMC4-207ENST00000467263 OGNP20774 298 aaKnown RBP-0.43□□□□□ -2.48
SMC4-207ENST00000467263 SNCBQ16143 134 aa-0.43□□□□□ -2.48
SMC4-207ENST00000467263 SCGB2B2Q4G0G5 96 aa-0.43□□□□□ -2.48
SMC4-207ENST00000467263 ANGPTL5Q86XS5 388 aa-0.43□□□□□ -2.48
SMC4-207ENST00000467263 LINC00269Q8N2A0 174 aa-0.43□□□□□ -2.48
SMC4-207ENST00000467263 PRNDQ9UKY0 176 aa-0.43□□□□□ -2.48
SMC4-207ENST00000467263 PYCARDQ9ULZ3 195 aa-0.43□□□□□ -2.48
SMC4-207ENST00000467263 RBBP6Q7Z6E9 1792 aaKnown RBP-0.43□□□□□ -2.48
SMC4-207ENST00000467263 KDM6BO15054 1643 aa-0.44□□□□□ -2.48
SMC4-207ENST00000467263 RIIAD1A6NNX1 92 aa-0.44□□□□□ -2.48
SMC4-207ENST00000467263 IGHV3-30P01768 117 aa-0.44□□□□□ -2.48
SMC4-207ENST00000467263 IGHV3-30-5P0DP03 117 aa-0.44□□□□□ -2.48
SMC4-207ENST00000467263 RPS3P23396 243 aaKnown RBP eCLIP-0.44□□□□□ -2.48
SMC4-207ENST00000467263 HBBP68871 147 aa-0.44□□□□□ -2.48
SMC4-207ENST00000467263 LINC00208Q96KT6 92 aa-0.44□□□□□ -2.48
SMC4-207ENST00000467263 NCAPD3P42695 1498 aa-0.44□□□□□ -2.48
SMC4-207ENST00000467263 UHRF1BP1Q6BDS2 1440 aa-0.45□□□□□ -2.48
SMC4-207ENST00000467263 H7C1C5 153 aa-0.45□□□□□ -2.48
SMC4-207ENST00000467263 LCN6P62502 163 aa-0.45□□□□□ -2.48
SMC4-207ENST00000467263 ZNF56Q15929 161 aa-0.45□□□□□ -2.48
SMC4-207ENST00000467263 PLEKHB2Q96CS7 222 aa-0.45□□□□□ -2.48
SMC4-207ENST00000467263 TPRKBQ9Y3C4 175 aa-0.45□□□□□ -2.48
SMC4-207ENST00000467263 ASXL3Q9C0F0 2248 aa-0.45□□□□□ -2.48
SMC4-207ENST00000467263 A0A1W2PRS3 328 aa-0.46□□□□□ -2.48
SMC4-207ENST00000467263 PIAS1O75925 651 aa-0.46□□□□□ -2.48
SMC4-207ENST00000467263 EVI2AP22794 236 aa-0.46□□□□□ -2.48
SMC4-207ENST00000467263 Q5BKY6 102 aa-0.46□□□□□ -2.48
SMC4-207ENST00000467263 GRPEL2Q8TAA5 225 aa-0.46□□□□□ -2.48
SMC4-207ENST00000467263 EFCAB11Q9BUY7 163 aa-0.46□□□□□ -2.48
SMC4-207ENST00000467263 CELSR2Q9HCU4 2923 aa-0.46□□□□□ -2.48
SMC4-207ENST00000467263 CD109Q6YHK3 1445 aa-0.47□□□□□ -2.48
SMC4-207ENST00000467263 CST7O76096 145 aa-0.47□□□□□ -2.48
SMC4-207ENST00000467263 APOA2P02652 100 aa-0.47□□□□□ -2.48
SMC4-207ENST00000467263 MT-ND6P03923 174 aa-0.47□□□□□ -2.48
SMC4-207ENST00000467263 PHBP35232 272 aa-0.47□□□□□ -2.48
SMC4-207ENST00000467263 REEP5Q00765 189 aa-0.47□□□□□ -2.48
SMC4-207ENST00000467263 AKR1C8PQ5T2L2 129 aa-0.47□□□□□ -2.48
SMC4-207ENST00000467263 C1orf140Q5VVS0 124 aa-0.47□□□□□ -2.48
SMC4-207ENST00000467263 OR4C12Q96R67 309 aa-0.47□□□□□ -2.48
SMC4-207ENST00000467263 PROK2Q9HC23 129 aa-0.47□□□□□ -2.48
SMC4-207ENST00000467263 SSR3Q9UNL2 185 aa-0.47□□□□□ -2.48
SMC4-207ENST00000467263 DSPPQ9NZW4 1301 aa-0.47□□□□□ -2.48
SMC4-207ENST00000467263 F8P00451 2351 aa-0.47□□□□□ -2.49
SMC4-207ENST00000467263 JMJD1CQ15652 2540 aa-0.47□□□□□ -2.49
SMC4-207ENST00000467263 ATG2AQ2TAZ0 1938 aa-0.48□□□□□ -2.49
SMC4-207ENST00000467263 ATP5HO75947 161 aa-0.48□□□□□ -2.49
SMC4-207ENST00000467263 IFNA6P05013 189 aa-0.48□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms