RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 FXYD7P58549 80 aa15.51■□□□□ 0.07
SDF4-205ENST00000465727 SRSF1Q07955 248 aaKnown RBP eCLIP15.51■□□□□ 0.07
SDF4-205ENST00000465727 RNF5Q99942 180 aa15.51■□□□□ 0.07
SDF4-205ENST00000465727 TM2D2Q9BX73 214 aa15.51■□□□□ 0.07
SDF4-205ENST00000465727 CTSZQ9UBR2 303 aa15.51■□□□□ 0.07
SDF4-205ENST00000465727 HHLA3Q9XRX5 114 aa15.51■□□□□ 0.07
SDF4-205ENST00000465727 RIF1Q5UIP0 2472 aaKnown RBP15.5■□□□□ 0.07
SDF4-205ENST00000465727 IGHV1-3A0A0C4DH29 117 aa15.5■□□□□ 0.07
SDF4-205ENST00000465727 K7EIM0 57 aa15.5■□□□□ 0.07
SDF4-205ENST00000465727 EVI2AP22794 236 aa15.5■□□□□ 0.07
SDF4-205ENST00000465727 SRSF2Q01130 221 aaKnown RBP15.5■□□□□ 0.07
SDF4-205ENST00000465727 ODF1Q14990 250 aa15.5■□□□□ 0.07
SDF4-205ENST00000465727 C1orf185Q5T7R7 199 aa15.5■□□□□ 0.07
SDF4-205ENST00000465727 NXT2Q9NPJ8 142 aaKnown RBP15.5■□□□□ 0.07
SDF4-205ENST00000465727 TMSB15BA0A087X1C1 80 aa15.5■□□□□ 0.07
SDF4-205ENST00000465727 PPIAL4CA0A0B4J2A2 164 aa15.5■□□□□ 0.07
SDF4-205ENST00000465727 F8W1H4 67 aa15.5■□□□□ 0.07
SDF4-205ENST00000465727 IL4P05112 153 aa15.5■□□□□ 0.07
SDF4-205ENST00000465727 FCER1GP30273 86 aa15.5■□□□□ 0.07
SDF4-205ENST00000465727 BMI1P35226 326 aa15.5■□□□□ 0.07
SDF4-205ENST00000465727 TWIST1Q15672 202 aa15.5■□□□□ 0.07
SDF4-205ENST00000465727 ADIPOQQ15848 244 aa15.5■□□□□ 0.07
SDF4-205ENST00000465727 PHLDA1Q8WV24 401 aaPredicted RBP15.5■□□□□ 0.07
SDF4-205ENST00000465727 SIGMAR1Q99720 223 aa15.5■□□□□ 0.07
SDF4-205ENST00000465727 IGLV1-47P01700 117 aa15.49■□□□□ 0.07
SDF4-205ENST00000465727 CLEC2AQ6UVW9 174 aa15.49■□□□□ 0.07
SDF4-205ENST00000465727 RAB1BQ9H0U4 201 aa15.49■□□□□ 0.07
SDF4-205ENST00000465727 IGKCP01834 107 aa15.48■□□□□ 0.07
SDF4-205ENST00000465727 IGLC6P0CF74 106 aa15.48■□□□□ 0.07
SDF4-205ENST00000465727 PLA2G2CQ5R387 149 aa15.48■□□□□ 0.07
SDF4-205ENST00000465727 C22orf34Q6ZV56 151 aa15.48■□□□□ 0.07
SDF4-205ENST00000465727 CCL17Q92583 94 aa15.48■□□□□ 0.07
SDF4-205ENST00000465727 OTOGLQ3ZCN5 2332 aa15.48■□□□□ 0.07
SDF4-205ENST00000465727 ATP5LO75964 103 aa15.48■□□□□ 0.07
SDF4-205ENST00000465727 FAM27E3Q08E93 113 aa15.48■□□□□ 0.07
SDF4-205ENST00000465727 TM4SF20Q53R12 229 aa15.48■□□□□ 0.07
SDF4-205ENST00000465727 ZNF562Q6V9R5 426 aa15.48■□□□□ 0.07
SDF4-205ENST00000465727 CNFNQ9BYD5 112 aa15.48■□□□□ 0.07
SDF4-205ENST00000465727 FBXL15Q9H469 300 aa15.48■□□□□ 0.07
SDF4-205ENST00000465727 MALRD1Q5VYJ5 2156 aa15.47■□□□□ 0.07
SDF4-205ENST00000465727 IGKV2D-26A0A0A0MRZ7 120 aa15.47■□□□□ 0.07
SDF4-205ENST00000465727 FOXI2Q6ZQN5 318 aa15.47■□□□□ 0.07
SDF4-205ENST00000465727 CEND1Q8N111 149 aa15.47■□□□□ 0.07
SDF4-205ENST00000465727 PRR25Q96S07 402 aa15.47■□□□□ 0.07
SDF4-205ENST00000465727 EP300Q09472 2414 aaPredicted RBP15.47■□□□□ 0.07
SDF4-205ENST00000465727 SVILO95425 2214 aa15.47■□□□□ 0.07
SDF4-205ENST00000465727 TRBV25-1A0A075B6N4 114 aa15.47■□□□□ 0.07
SDF4-205ENST00000465727 SMKR1H3BMG3 65 aa15.47■□□□□ 0.07
SDF4-205ENST00000465727 TAL2Q16559 108 aa15.47■□□□□ 0.07
SDF4-205ENST00000465727 CD300EQ496F6 205 aaPredicted RBP15.47■□□□□ 0.07
SDF4-205ENST00000465727 GVINP1Q7Z2Y8 2422 aa15.47■□□□□ 0.07
SDF4-205ENST00000465727 E9PLD3 99 aa15.46■□□□□ 0.07
SDF4-205ENST00000465727 BUB1B-PAK6H3BSN5 160 aa15.46■□□□□ 0.07
SDF4-205ENST00000465727 GNG7O60262 68 aa15.46■□□□□ 0.07
SDF4-205ENST00000465727 EGR2P11161 476 aaPredicted RBP15.46■□□□□ 0.07
SDF4-205ENST00000465727 AZU1P20160 251 aa15.46■□□□□ 0.07
SDF4-205ENST00000465727 LEPP41159 167 aa15.46■□□□□ 0.07
SDF4-205ENST00000465727 C18orf15Q96N68 181 aa15.46■□□□□ 0.07
SDF4-205ENST00000465727 SPOCK3Q9BQ16 436 aa15.45■□□□□ 0.06
SDF4-205ENST00000465727 ZNF292O60281 2723 aa15.45■□□□□ 0.06
SDF4-205ENST00000465727 PTPRZ1P23471 2315 aaPredicted RBP15.45■□□□□ 0.06
SDF4-205ENST00000465727 ZNF207O43670 478 aaKnown RBP15.45■□□□□ 0.06
SDF4-205ENST00000465727 DPM2O94777 84 aa15.45■□□□□ 0.06
SDF4-205ENST00000465727 PRSS1P07477 247 aa15.45■□□□□ 0.06
SDF4-205ENST00000465727 RNF185Q96GF1 192 aa15.45■□□□□ 0.06
SDF4-205ENST00000465727 ABCA1O95477 2261 aa15.44■□□□□ 0.06
SDF4-205ENST00000465727 SRSF6Q13247 344 aaKnown RBP15.44■□□□□ 0.06
SDF4-205ENST00000465727 KLF17Q5JT82 389 aaPredicted RBP15.44■□□□□ 0.06
SDF4-205ENST00000465727 WFDC3Q8IUB2 231 aa15.44■□□□□ 0.06
SDF4-205ENST00000465727 NHP2Q9NX24 153 aaKnown RBP15.44■□□□□ 0.06
SDF4-205ENST00000465727 CNIH1O95406 144 aa15.44■□□□□ 0.06
SDF4-205ENST00000465727 ZNF48Q96MX3 618 aaPredicted RBP15.44■□□□□ 0.06
SDF4-205ENST00000465727 SPANXB1Q9NS25 103 aaPredicted RBP15.44■□□□□ 0.06
SDF4-205ENST00000465727 A0A1B0GV72 72 aa15.42■□□□□ 0.06
SDF4-205ENST00000465727 A0A1W2PRD5 423 aa15.42■□□□□ 0.06
SDF4-205ENST00000465727 A0A1W2PRF3 423 aa15.42■□□□□ 0.06
SDF4-205ENST00000465727 A0A1W2PRM7 423 aa15.42■□□□□ 0.06
SDF4-205ENST00000465727 GAGE12HA6NDE8 117 aa15.42■□□□□ 0.06
SDF4-205ENST00000465727 TNFRSF6BO95407 300 aa15.42■□□□□ 0.06
SDF4-205ENST00000465727 RPEQ96AT9 228 aa15.42■□□□□ 0.06
SDF4-205ENST00000465727 SPATA25Q9BR10 227 aa15.42■□□□□ 0.06
SDF4-205ENST00000465727 IGKV2-40A0A087WW87 121 aaPredicted RBP15.42■□□□□ 0.06
SDF4-205ENST00000465727 IGLL5B9A064 214 aa15.42■□□□□ 0.06
SDF4-205ENST00000465727 K7ERJ3 54 aa15.42■□□□□ 0.06
SDF4-205ENST00000465727 IGKV2D-40P01614 121 aaPredicted RBP15.42■□□□□ 0.06
SDF4-205ENST00000465727 RPL7P18124 248 aaKnown RBP15.42■□□□□ 0.06
SDF4-205ENST00000465727 ZC2HC1BQ5TFG8 222 aa15.42■□□□□ 0.06
SDF4-205ENST00000465727 GTSF1LQ9H1H1 148 aa15.42■□□□□ 0.06
SDF4-205ENST00000465727 Q8N8P6 123 aa15.4■□□□□ 0.06
SDF4-205ENST00000465727 ZNF479Q96JC4 524 aa15.4■□□□□ 0.06
SDF4-205ENST00000465727 FOXC2Q99958 501 aa15.4■□□□□ 0.06
SDF4-205ENST00000465727 TSSC4Q9Y5U2 329 aaPredicted RBP15.4■□□□□ 0.06
SDF4-205ENST00000465727 NPIPB5A8MRT5 1133 aa15.39■□□□□ 0.05
SDF4-205ENST00000465727 PRB4P10163 310 aaPredicted RBP15.39■□□□□ 0.05
SDF4-205ENST00000465727 SMAGPQ0VAQ4 97 aa15.39■□□□□ 0.05
SDF4-205ENST00000465727 GTSCR1Q86UQ5 136 aa15.39■□□□□ 0.05
SDF4-205ENST00000465727 TTTY13Q9BZ97 58 aa15.39■□□□□ 0.05
SDF4-205ENST00000465727 RALYQ9UKM9 306 aaKnown RBP15.39■□□□□ 0.05
SDF4-205ENST00000465727 TMEM8BA6NDV4 472 aa15.39■□□□□ 0.05
SDF4-205ENST00000465727 C16orf97H3BN30 126 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 296 ms