RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 URB1-AS1Q96HZ7 61 aa11.33□□□□□ -0.59
RFTN1-203ENST00000432519 ZNF705DP0CH99 300 aaPredicted RBP11.33□□□□□ -0.6
RFTN1-203ENST00000432519 ZNF705BP0CI00 300 aaPredicted RBP11.33□□□□□ -0.6
RFTN1-203ENST00000432519 RPL7P18124 248 aaKnown RBP11.33□□□□□ -0.6
RFTN1-203ENST00000432519 NIT1Q86X76 327 aa11.33□□□□□ -0.6
RFTN1-203ENST00000432519 RNF182Q8N6D2 247 aa11.33□□□□□ -0.6
RFTN1-203ENST00000432519 TXN2Q99757 166 aa11.33□□□□□ -0.6
RFTN1-203ENST00000432519 AAMDCQ9H7C9 122 aa11.33□□□□□ -0.6
RFTN1-203ENST00000432519 NRN1Q9NPD7 142 aa11.33□□□□□ -0.6
RFTN1-203ENST00000432519 TMSB15BA0A087X1C1 80 aa11.32□□□□□ -0.6
RFTN1-203ENST00000432519 TRBV6-1A0A0K0K1D8 114 aa11.32□□□□□ -0.6
RFTN1-203ENST00000432519 PRAC2D3DTV9 90 aa11.32□□□□□ -0.6
RFTN1-203ENST00000432519 CHEK1O14757 476 aa11.32□□□□□ -0.6
RFTN1-203ENST00000432519 BUB3O43684 328 aa11.32□□□□□ -0.6
RFTN1-203ENST00000432519 ARMS2P0C7Q2 107 aa11.32□□□□□ -0.6
RFTN1-203ENST00000432519 DEFA6Q01524 100 aa11.32□□□□□ -0.6
RFTN1-203ENST00000432519 ATP5L2Q7Z4Y8 100 aa11.32□□□□□ -0.6
RFTN1-203ENST00000432519 SIGLECL1Q8N7X8 197 aa11.32□□□□□ -0.6
RFTN1-203ENST00000432519 Q8N976 141 aa11.32□□□□□ -0.6
RFTN1-203ENST00000432519 TMEM8BA6NDV4 472 aa11.32□□□□□ -0.6
RFTN1-203ENST00000432519 ZNF324O75467 553 aaPredicted RBP11.32□□□□□ -0.6
RFTN1-203ENST00000432519 TRBV12-3P01733 135 aa11.32□□□□□ -0.6
RFTN1-203ENST00000432519 NTF3P20783 257 aa11.32□□□□□ -0.6
RFTN1-203ENST00000432519 KRTDAPP60985 99 aa11.32□□□□□ -0.6
RFTN1-203ENST00000432519 KLK9Q2XQG4 91 aa11.32□□□□□ -0.6
RFTN1-203ENST00000432519 C19orf54Q5BKX5 351 aa11.32□□□□□ -0.6
RFTN1-203ENST00000432519 KLK9Q9UKQ9 250 aa11.32□□□□□ -0.6
RFTN1-203ENST00000432519 ZFP30Q9Y2G7 519 aa11.32□□□□□ -0.6
RFTN1-203ENST00000432519 MOB4Q9Y3A3 225 aa11.32□□□□□ -0.6
RFTN1-203ENST00000432519 DOPEY2Q9Y3R5 2298 aa11.32□□□□□ -0.6
RFTN1-203ENST00000432519 ZNF80P51504 273 aaPredicted RBP11.32□□□□□ -0.6
RFTN1-203ENST00000432519 BLCAPP62952 87 aa11.32□□□□□ -0.6
RFTN1-203ENST00000432519 LCNL1Q6ZST4 164 aa11.32□□□□□ -0.6
RFTN1-203ENST00000432519 MAPK1IP1LQ8NDC0 245 aa11.32□□□□□ -0.6
RFTN1-203ENST00000432519 TPPP3Q9BW30 176 aa11.32□□□□□ -0.6
RFTN1-203ENST00000432519 MUC21A0A0G2JKD1 596 aa11.31□□□□□ -0.6
RFTN1-203ENST00000432519 MUC21A0A140T8X8 626 aa11.31□□□□□ -0.6
RFTN1-203ENST00000432519 H3BUX3 64 aa11.31□□□□□ -0.6
RFTN1-203ENST00000432519 SRSF1Q07955 248 aaKnown RBP eCLIP11.31□□□□□ -0.6
RFTN1-203ENST00000432519 MUC21Q5SSG8 566 aa11.31□□□□□ -0.6
RFTN1-203ENST00000432519 TRAV41A0A0B4J266 112 aa11.31□□□□□ -0.6
RFTN1-203ENST00000432519 GFRA4Q9GZZ7 299 aa11.31□□□□□ -0.6
RFTN1-203ENST00000432519 TEX15Q9BXT5 2789 aa11.3□□□□□ -0.6
RFTN1-203ENST00000432519 A1L4Q6 167 aa11.3□□□□□ -0.6
RFTN1-203ENST00000432519 K7EQM0 130 aa11.3□□□□□ -0.6
RFTN1-203ENST00000432519 MSMBP08118 114 aa11.3□□□□□ -0.6
RFTN1-203ENST00000432519 ERCC8Q13216 396 aa11.3□□□□□ -0.6
RFTN1-203ENST00000432519 PMCHL1Q16048 86 aa11.3□□□□□ -0.6
RFTN1-203ENST00000432519 ZNF575Q86XF7 245 aa11.3□□□□□ -0.6
RFTN1-203ENST00000432519 MEGF9Q9H1U4 602 aa11.3□□□□□ -0.6
RFTN1-203ENST00000432519 HIF1ANQ9NWT6 349 aa11.3□□□□□ -0.6
RFTN1-203ENST00000432519 NAV2Q8IVL1 2488 aa11.3□□□□□ -0.6
RFTN1-203ENST00000432519 ZNF138P52744 262 aa11.29□□□□□ -0.6
RFTN1-203ENST00000432519 RELQ04864 619 aaPredicted RBP11.29□□□□□ -0.6
RFTN1-203ENST00000432519 PRR25Q96S07 402 aa11.29□□□□□ -0.6
RFTN1-203ENST00000432519 NDUFS8O00217 210 aa11.29□□□□□ -0.6
RFTN1-203ENST00000432519 SH2D1AO60880 128 aa11.29□□□□□ -0.6
RFTN1-203ENST00000432519 BTF3P20290 206 aaKnown RBP11.29□□□□□ -0.6
RFTN1-203ENST00000432519 PSG9Q00887 426 aa11.29□□□□□ -0.6
RFTN1-203ENST00000432519 KLF5Q13887 457 aaPredicted RBP11.29□□□□□ -0.6
RFTN1-203ENST00000432519 LCN12Q6JVE5 192 aa11.29□□□□□ -0.6
RFTN1-203ENST00000432519 RNASEKQ6P5S7 137 aaKnown RBP11.29□□□□□ -0.6
RFTN1-203ENST00000432519 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.29□□□□□ -0.6
RFTN1-203ENST00000432519 OR4B1Q8NGF8 309 aa11.29□□□□□ -0.6
RFTN1-203ENST00000432519 EEF1AKMT3Q96AZ1 226 aa11.29□□□□□ -0.6
RFTN1-203ENST00000432519 KLK15Q9H2R5 256 aa11.29□□□□□ -0.6
RFTN1-203ENST00000432519 C3orf79P0CE67 100 aa11.28□□□□□ -0.6
RFTN1-203ENST00000432519 CSN1S1P47710 185 aa11.28□□□□□ -0.6
RFTN1-203ENST00000432519 TLN2Q9Y4G6 2542 aa11.28□□□□□ -0.6
RFTN1-203ENST00000432519 FAM231BA6NCW3 169 aa11.28□□□□□ -0.6
RFTN1-203ENST00000432519 TRGV3P03979 118 aa11.28□□□□□ -0.6
RFTN1-203ENST00000432519 C1orf194Q5T5A4 169 aa11.28□□□□□ -0.6
RFTN1-203ENST00000432519 UNQ9165/PRO28630Q6UXU0 137 aa11.28□□□□□ -0.6
RFTN1-203ENST00000432519 TEX43Q6ZNM6 134 aa11.28□□□□□ -0.6
RFTN1-203ENST00000432519 REC114Q7Z4M0 266 aa11.28□□□□□ -0.6
RFTN1-203ENST00000432519 S100A7AQ86SG5 101 aa11.28□□□□□ -0.6
RFTN1-203ENST00000432519 PAM16Q9Y3D7 125 aa11.28□□□□□ -0.6
RFTN1-203ENST00000432519 SELENOKQ9Y6D0 94 aa11.28□□□□□ -0.6
RFTN1-203ENST00000432519 HAX1O00165 279 aa11.27□□□□□ -0.6
RFTN1-203ENST00000432519 ATP5G2Q06055 141 aa11.27□□□□□ -0.6
RFTN1-203ENST00000432519 LOC102724200A0A096LPH7 203 aaPredicted RBP11.27□□□□□ -0.61
RFTN1-203ENST00000432519 KIR2DL5BA0A0G2JN68 375 aa11.27□□□□□ -0.61
RFTN1-203ENST00000432519 KIR2DL5BA0A0G2JPC4 375 aa11.27□□□□□ -0.61
RFTN1-203ENST00000432519 GOSR1O95249 250 aa11.27□□□□□ -0.61
RFTN1-203ENST00000432519 IGHV3-11P01762 117 aa11.27□□□□□ -0.61
RFTN1-203ENST00000432519 KIR2DL5AQ8N109 375 aa11.27□□□□□ -0.61
RFTN1-203ENST00000432519 A0A1B0GUT8 65 aa11.26□□□□□ -0.61
RFTN1-203ENST00000432519 TMEM95Q3KNT9 176 aa11.26□□□□□ -0.61
RFTN1-203ENST00000432519 EBLN2Q6P2I7 272 aa11.26□□□□□ -0.61
RFTN1-203ENST00000432519 SPOCK3Q9BQ16 436 aa11.26□□□□□ -0.61
RFTN1-203ENST00000432519 APCP25054 2843 aa11.26□□□□□ -0.61
RFTN1-203ENST00000432519 TRBV7-1A0A0A6YYK4 115 aa11.26□□□□□ -0.61
RFTN1-203ENST00000432519 TRAV8-2A0A0B4J237 113 aa11.26□□□□□ -0.61
RFTN1-203ENST00000432519 TMEM213A2RRL7 107 aa11.26□□□□□ -0.61
RFTN1-203ENST00000432519 A6NDX4 124 aa11.26□□□□□ -0.61
RFTN1-203ENST00000432519 HSBP1O75506 76 aa11.26□□□□□ -0.61
RFTN1-203ENST00000432519 SCGB2A1O75556 95 aa11.26□□□□□ -0.61
RFTN1-203ENST00000432519 CT45A10P0DMU9 189 aa11.26□□□□□ -0.61
RFTN1-203ENST00000432519 PPIFP30405 207 aaKnown RBP11.26□□□□□ -0.61
RFTN1-203ENST00000432519 Q6ZQT7 251 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms