RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 TET1Q8NFU7 2136 aa4.21□□□□□ -1.74
PTPN4-203ENST00000430976 MAP1BP46821 2468 aaKnown RBP4.21□□□□□ -1.74
PTPN4-203ENST00000430976 A0A087WZ39 114 aa4.21□□□□□ -1.74
PTPN4-203ENST00000430976 TEX49A0A1B0GTD5 131 aa4.21□□□□□ -1.74
PTPN4-203ENST00000430976 LOC107986453A0A1B0GWG9 222 aa4.21□□□□□ -1.74
PTPN4-203ENST00000430976 TRIAP1O43715 76 aa4.21□□□□□ -1.74
PTPN4-203ENST00000430976 ZNF883P0CG24 379 aa4.21□□□□□ -1.74
PTPN4-203ENST00000430976 MARCH3Q86UD3 253 aa4.21□□□□□ -1.74
PTPN4-203ENST00000430976 TMEM252Q8N6L7 170 aa4.21□□□□□ -1.74
PTPN4-203ENST00000430976 MYOZ3Q8TDC0 251 aa4.21□□□□□ -1.74
PTPN4-203ENST00000430976 ZNF837Q96EG3 531 aaPredicted RBP4.21□□□□□ -1.74
PTPN4-203ENST00000430976 CICQ96RK0 1608 aaPredicted RBP4.21□□□□□ -1.74
PTPN4-203ENST00000430976 IGHV1-58A0A0C4DH39 117 aa4.21□□□□□ -1.74
PTPN4-203ENST00000430976 A0A1B0GWA3 101 aa4.21□□□□□ -1.74
PTPN4-203ENST00000430976 WNT9BO14905 357 aa4.21□□□□□ -1.74
PTPN4-203ENST00000430976 IAPPP10997 89 aa4.21□□□□□ -1.74
PTPN4-203ENST00000430976 IL9P15248 144 aa4.21□□□□□ -1.74
PTPN4-203ENST00000430976 ZNF137PP52743 207 aa4.21□□□□□ -1.74
PTPN4-203ENST00000430976 Q6ZRU5 148 aa4.21□□□□□ -1.74
PTPN4-203ENST00000430976 H1FXQ92522 213 aaKnown RBP4.21□□□□□ -1.74
PTPN4-203ENST00000430976 ZNF414Q96IQ9 312 aa4.21□□□□□ -1.74
PTPN4-203ENST00000430976 IL36BQ9NZH7 164 aa4.21□□□□□ -1.74
PTPN4-203ENST00000430976 TAC3Q9UHF0 121 aa4.21□□□□□ -1.74
PTPN4-203ENST00000430976 DENND4CQ5VZ89 1909 aa4.2□□□□□ -1.74
PTPN4-203ENST00000430976 K7EM74 188 aa4.2□□□□□ -1.74
PTPN4-203ENST00000430976 IGHG2P01859 326 aa4.2□□□□□ -1.74
PTPN4-203ENST00000430976 DEFA4P12838 97 aa4.2□□□□□ -1.74
PTPN4-203ENST00000430976 HLA-DMBP28068 263 aa4.2□□□□□ -1.74
PTPN4-203ENST00000430976 NANOS3P60323 173 aaKnown RBP4.2□□□□□ -1.74
PTPN4-203ENST00000430976 RSPO1Q2MKA7 263 aaPredicted RBP4.2□□□□□ -1.74
PTPN4-203ENST00000430976 UNQ9165/PRO28630Q6UXU0 137 aa4.2□□□□□ -1.74
PTPN4-203ENST00000430976 NOTCH2Q04721 2471 aa4.2□□□□□ -1.74
PTPN4-203ENST00000430976 TRIOBPQ9H2D6 2365 aa4.2□□□□□ -1.74
PTPN4-203ENST00000430976 THADAQ6YHU6 1953 aa4.2□□□□□ -1.74
PTPN4-203ENST00000430976 A8MUN3 132 aa4.2□□□□□ -1.74
PTPN4-203ENST00000430976 PRB1P04280 392 aa4.2□□□□□ -1.74
PTPN4-203ENST00000430976 UBE2BP63146 152 aa4.2□□□□□ -1.74
PTPN4-203ENST00000430976 ATP1A1-AS1Q5TC04 95 aa4.2□□□□□ -1.74
PTPN4-203ENST00000430976 REG3GQ6UW15 175 aa4.2□□□□□ -1.74
PTPN4-203ENST00000430976 ZFP2Q6ZN57 461 aa4.2□□□□□ -1.74
PTPN4-203ENST00000430976 TAS2R4Q9NYW5 299 aa4.2□□□□□ -1.74
PTPN4-203ENST00000430976 DOCK5Q9H7D0 1870 aa4.2□□□□□ -1.74
PTPN4-203ENST00000430976 ABCA1O95477 2261 aa4.2□□□□□ -1.74
PTPN4-203ENST00000430976 USP34Q70CQ2 3546 aa4.2□□□□□ -1.74
PTPN4-203ENST00000430976 IGLV1-36A0A0B4J1U3 117 aa4.2□□□□□ -1.74
PTPN4-203ENST00000430976 WI2-2373I1.2A0A1W2PRP0 233 aa4.2□□□□□ -1.74
PTPN4-203ENST00000430976 TCRBV4S1A1TA0A5B7 111 aa4.2□□□□□ -1.74
PTPN4-203ENST00000430976 EPOPA6NHQ4 379 aa4.2□□□□□ -1.74
PTPN4-203ENST00000430976 ADARB2-AS1A8MUL3 147 aa4.2□□□□□ -1.74
PTPN4-203ENST00000430976 PSPHP1O15172 72 aa4.2□□□□□ -1.74
PTPN4-203ENST00000430976 CA6P23280 308 aa4.2□□□□□ -1.74
PTPN4-203ENST00000430976 PLA2G5P39877 138 aa4.2□□□□□ -1.74
PTPN4-203ENST00000430976 EFNA4P52798 201 aa4.2□□□□□ -1.74
PTPN4-203ENST00000430976 TEPPQ6URK8 271 aa4.2□□□□□ -1.74
PTPN4-203ENST00000430976 Q6ZS92 163 aa4.2□□□□□ -1.74
PTPN4-203ENST00000430976 C11orf53Q8IXP5 236 aa4.2□□□□□ -1.74
PTPN4-203ENST00000430976 NEXN-AS1Q8NBZ9 246 aa4.2□□□□□ -1.74
PTPN4-203ENST00000430976 VSIG2Q96IQ7 327 aa4.2□□□□□ -1.74
PTPN4-203ENST00000430976 TET2Q6N021 2002 aaPredicted RBP4.2□□□□□ -1.74
PTPN4-203ENST00000430976 TRAV12-3A0A0B4J271 114 aa4.19□□□□□ -1.74
PTPN4-203ENST00000430976 IGKV1D-13A0A0B4J2D9 117 aa4.19□□□□□ -1.74
PTPN4-203ENST00000430976 IGHV1-69DA0A0B4J2H0 117 aa4.19□□□□□ -1.74
PTPN4-203ENST00000430976 IGKV3D-7A0A0C4DH55 119 aa4.19□□□□□ -1.74
PTPN4-203ENST00000430976 A0A0G2JNJ9 132 aa4.19□□□□□ -1.74
PTPN4-203ENST00000430976 IQCF6A8MYZ5 107 aa4.19□□□□□ -1.74
PTPN4-203ENST00000430976 LTAP01374 205 aa4.19□□□□□ -1.74
PTPN4-203ENST00000430976 PRB2P02812 416 aaPredicted RBP4.19□□□□□ -1.74
PTPN4-203ENST00000430976 IGKV1-13P0DP09 117 aa4.19□□□□□ -1.74
PTPN4-203ENST00000430976 Q6ZVQ6 151 aa4.19□□□□□ -1.74
PTPN4-203ENST00000430976 Q9UFV3 132 aa4.19□□□□□ -1.74
PTPN4-203ENST00000430976 NDUFS7O75251 213 aa4.19□□□□□ -1.74
PTPN4-203ENST00000430976 BSPH1Q075Z2 132 aa4.19□□□□□ -1.74
PTPN4-203ENST00000430976 ERCC8Q13216 396 aa4.19□□□□□ -1.74
PTPN4-203ENST00000430976 LINC01545Q5VT33 79 aa4.19□□□□□ -1.74
PTPN4-203ENST00000430976 PIP4P1Q86T03 277 aa4.19□□□□□ -1.74
PTPN4-203ENST00000430976 PEX7O00628 323 aa4.19□□□□□ -1.74
PTPN4-203ENST00000430976 SH2D1AO60880 128 aa4.19□□□□□ -1.74
PTPN4-203ENST00000430976 FGF12P61328 243 aa4.19□□□□□ -1.74
PTPN4-203ENST00000430976 BLCAPP62952 87 aa4.19□□□□□ -1.74
PTPN4-203ENST00000430976 IGKV1D-43A0A0B4J1Z2 117 aa4.18□□□□□ -1.74
PTPN4-203ENST00000430976 TRBV27A0A0K0K1C4 114 aa4.18□□□□□ -1.74
PTPN4-203ENST00000430976 MYMXA0A1B0GTQ4 84 aa4.18□□□□□ -1.74
PTPN4-203ENST00000430976 LRCOL1A6NCL2 159 aa4.18□□□□□ -1.74
PTPN4-203ENST00000430976 LST1O00453 97 aa4.18□□□□□ -1.74
PTPN4-203ENST00000430976 NPYP01303 97 aa4.18□□□□□ -1.74
PTPN4-203ENST00000430976 RPS11P62280 158 aaKnown RBP eCLIP4.18□□□□□ -1.74
PTPN4-203ENST00000430976 TMEM30BQ3MIR4 351 aa4.18□□□□□ -1.74
PTPN4-203ENST00000430976 SPANXN5Q5MJ07 72 aa4.18□□□□□ -1.74
PTPN4-203ENST00000430976 PRSS33Q8NF86 280 aa4.18□□□□□ -1.74
PTPN4-203ENST00000430976 C4orf45Q96LM5 186 aa4.18□□□□□ -1.74
PTPN4-203ENST00000430976 RGPD5Q99666 1765 aa4.18□□□□□ -1.74
PTPN4-203ENST00000430976 ANKRD31Q8N7Z5 1873 aa4.18□□□□□ -1.74
PTPN4-203ENST00000430976 ZNF646O15015 1829 aaPredicted RBP4.18□□□□□ -1.74
PTPN4-203ENST00000430976 TNRC18O15417 2968 aaPredicted RBP4.18□□□□□ -1.74
PTPN4-203ENST00000430976 MYLKQ15746 1914 aa4.18□□□□□ -1.74
PTPN4-203ENST00000430976 AGRNO00468 2067 aa4.18□□□□□ -1.74
PTPN4-203ENST00000430976 TRBV7-6A0A0J9YX20 115 aa4.18□□□□□ -1.74
PTPN4-203ENST00000430976 TANC2Q9HCD6 1990 aa4.18□□□□□ -1.74
PTPN4-203ENST00000430976 CD24P25063 80 aa4.18□□□□□ -1.74
PTPN4-203ENST00000430976 CSRP3P50461 194 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms