RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 PSG8Q9UQ74 426 aa8.66□□□□□ -1.02
TCOF1-203ENST00000394269 RPL7P18124 248 aaKnown RBP8.66□□□□□ -1.02
TCOF1-203ENST00000394269 NTF3P20783 257 aa8.66□□□□□ -1.02
TCOF1-203ENST00000394269 FOXA3P55318 350 aaPredicted RBP8.66□□□□□ -1.02
TCOF1-203ENST00000394269 S100A7AQ86SG5 101 aa8.66□□□□□ -1.02
TCOF1-203ENST00000394269 GBGT1Q8N5D6 347 aa8.66□□□□□ -1.02
TCOF1-203ENST00000394269 TMEM14CQ9P0S9 112 aa8.66□□□□□ -1.02
TCOF1-203ENST00000394269 SMIM27A0A1W2PRY6 76 aa8.65□□□□□ -1.02
TCOF1-203ENST00000394269 IZUMO1RA6ND01 250 aa8.65□□□□□ -1.02
TCOF1-203ENST00000394269 PMCHP20382 165 aa8.65□□□□□ -1.02
TCOF1-203ENST00000394269 SLAQ13239 276 aa8.65□□□□□ -1.02
TCOF1-203ENST00000394269 IQCJQ1A5X6 159 aa8.65□□□□□ -1.02
TCOF1-203ENST00000394269 Q86TA4 180 aa8.65□□□□□ -1.02
TCOF1-203ENST00000394269 EEF1AKMT3Q96AZ1 226 aa8.65□□□□□ -1.02
TCOF1-203ENST00000394269 CCDC140Q96MF4 163 aa8.65□□□□□ -1.02
TCOF1-203ENST00000394269 KLK15Q9H2R5 256 aa8.65□□□□□ -1.02
TCOF1-203ENST00000394269 RPP21Q9H633 154 aaKnown RBP8.65□□□□□ -1.02
TCOF1-203ENST00000394269 TRBV12-3P01733 135 aa8.65□□□□□ -1.03
TCOF1-203ENST00000394269 TMEM136Q6ZRR5 245 aa8.65□□□□□ -1.03
TCOF1-203ENST00000394269 ZNF502Q8TBZ5 544 aa8.65□□□□□ -1.03
TCOF1-203ENST00000394269 ZC2HC1AQ96GY0 325 aa8.65□□□□□ -1.03
TCOF1-203ENST00000394269 C2CD3Q4AC94 2353 aa8.65□□□□□ -1.03
TCOF1-203ENST00000394269 VWC2LB2RUY7 222 aa8.64□□□□□ -1.03
TCOF1-203ENST00000394269 J3KRW8 73 aa8.64□□□□□ -1.03
TCOF1-203ENST00000394269 LTAP01374 205 aa8.64□□□□□ -1.03
TCOF1-203ENST00000394269 TSKUQ8WUA8 353 aa8.64□□□□□ -1.03
TCOF1-203ENST00000394269 A8MWL6 223 aa8.64□□□□□ -1.03
TCOF1-203ENST00000394269 ZNF705DP0CH99 300 aaPredicted RBP8.64□□□□□ -1.03
TCOF1-203ENST00000394269 ZNF705BP0CI00 300 aaPredicted RBP8.64□□□□□ -1.03
TCOF1-203ENST00000394269 CT45A10P0DMU9 189 aa8.64□□□□□ -1.03
TCOF1-203ENST00000394269 FAM19A2Q8N3H0 131 aa8.64□□□□□ -1.03
TCOF1-203ENST00000394269 GNB1LQ9BYB4 327 aa8.64□□□□□ -1.03
TCOF1-203ENST00000394269 RNF24Q9Y225 148 aa8.64□□□□□ -1.03
TCOF1-203ENST00000394269 KLF12Q9Y4X4 402 aa8.64□□□□□ -1.03
TCOF1-203ENST00000394269 DIRC3C9JPN6 131 aa8.64□□□□□ -1.03
TCOF1-203ENST00000394269 IGHV4-59P01825 116 aa8.64□□□□□ -1.03
TCOF1-203ENST00000394269 RELQ04864 619 aaPredicted RBP8.64□□□□□ -1.03
TCOF1-203ENST00000394269 WDR73Q6P4I2 378 aa8.64□□□□□ -1.03
TCOF1-203ENST00000394269 ERCC8Q13216 396 aa8.63□□□□□ -1.03
TCOF1-203ENST00000394269 GTSF1Q8WW33 167 aa8.63□□□□□ -1.03
TCOF1-203ENST00000394269 VGLL1Q99990 258 aa8.63□□□□□ -1.03
TCOF1-203ENST00000394269 MLST8Q9BVC4 326 aa8.63□□□□□ -1.03
TCOF1-203ENST00000394269 A0A1B0GV90 55 aa8.63□□□□□ -1.03
TCOF1-203ENST00000394269 IGLV2-11P01706 119 aa8.63□□□□□ -1.03
TCOF1-203ENST00000394269 GDF5OSQ5U4N7 250 aa8.63□□□□□ -1.03
TCOF1-203ENST00000394269 ARL3P36405 182 aa8.63□□□□□ -1.03
TCOF1-203ENST00000394269 PSG3Q16557 428 aa8.63□□□□□ -1.03
TCOF1-203ENST00000394269 DEFB112Q30KQ8 113 aa8.63□□□□□ -1.03
TCOF1-203ENST00000394269 VN1R17PQ8TDU5 208 aa8.63□□□□□ -1.03
TCOF1-203ENST00000394269 RCHY1Q96PM5 261 aa8.63□□□□□ -1.03
TCOF1-203ENST00000394269 SMAD5-AS1Q9Y6J3 95 aa8.63□□□□□ -1.03
TCOF1-203ENST00000394269 METTL26Q96S19 204 aa8.62□□□□□ -1.03
TCOF1-203ENST00000394269 TP53TG3Q9ULZ0 132 aa8.62□□□□□ -1.03
TCOF1-203ENST00000394269 M0QZ24 198 aa8.62□□□□□ -1.03
TCOF1-203ENST00000394269 CHEK1O14757 476 aa8.62□□□□□ -1.03
TCOF1-203ENST00000394269 PAX1P15863 534 aa8.62□□□□□ -1.03
TCOF1-203ENST00000394269 SRD5A1P18405 259 aa8.62□□□□□ -1.03
TCOF1-203ENST00000394269 AMTP48728 403 aa8.62□□□□□ -1.03
TCOF1-203ENST00000394269 TRAV9-1A0A075B6T8 112 aa8.61□□□□□ -1.03
TCOF1-203ENST00000394269 PRAC2D3DTV9 90 aa8.61□□□□□ -1.03
TCOF1-203ENST00000394269 MRPS12O15235 138 aaKnown RBP8.61□□□□□ -1.03
TCOF1-203ENST00000394269 HLA-DQA1P01909 254 aa8.61□□□□□ -1.03
TCOF1-203ENST00000394269 KRTDAPP60985 99 aa8.61□□□□□ -1.03
TCOF1-203ENST00000394269 FAM231DQ6ZW35 169 aa8.61□□□□□ -1.03
TCOF1-203ENST00000394269 SERTM2A0A1B0GWG4 89 aa8.61□□□□□ -1.03
TCOF1-203ENST00000394269 CSN3P07498 182 aa8.61□□□□□ -1.03
TCOF1-203ENST00000394269 LCN12Q6JVE5 192 aa8.61□□□□□ -1.03
TCOF1-203ENST00000394269 C10orf99Q6UWK7 81 aa8.61□□□□□ -1.03
TCOF1-203ENST00000394269 SIGLECL1Q8N7X8 197 aa8.61□□□□□ -1.03
TCOF1-203ENST00000394269 TRBV9A0A0B4J1U6 114 aa8.61□□□□□ -1.03
TCOF1-203ENST00000394269 BUB3O43684 328 aa8.61□□□□□ -1.03
TCOF1-203ENST00000394269 MT-ND6P03923 174 aa8.61□□□□□ -1.03
TCOF1-203ENST00000394269 RNASEKQ6P5S7 137 aaKnown RBP8.61□□□□□ -1.03
TCOF1-203ENST00000394269 UNQ9165/PRO28630Q6UXU0 137 aa8.61□□□□□ -1.03
TCOF1-203ENST00000394269 LINC01356Q8N9X3 169 aa8.61□□□□□ -1.03
TCOF1-203ENST00000394269 TMEM75Q8N9X5 138 aa8.61□□□□□ -1.03
TCOF1-203ENST00000394269 MBD6Q96DN6 1003 aa8.61□□□□□ -1.03
TCOF1-203ENST00000394269 ORM1P02763 201 aa8.6□□□□□ -1.03
TCOF1-203ENST00000394269 DEFB1P60022 68 aa8.6□□□□□ -1.03
TCOF1-203ENST00000394269 PSG9Q00887 426 aa8.6□□□□□ -1.03
TCOF1-203ENST00000394269 SRSF2Q01130 221 aaKnown RBP8.6□□□□□ -1.03
TCOF1-203ENST00000394269 COA6Q5JTJ3 125 aaKnown RBP8.6□□□□□ -1.03
TCOF1-203ENST00000394269 POLR3KQ9Y2Y1 108 aaPredicted RBP8.6□□□□□ -1.03
TCOF1-203ENST00000394269 STAB1Q9NY15 2570 aa8.6□□□□□ -1.03
TCOF1-203ENST00000394269 NBEAL1Q6ZS30 2694 aa8.6□□□□□ -1.03
TCOF1-203ENST00000394269 PPIFP30405 207 aaKnown RBP8.6□□□□□ -1.03
TCOF1-203ENST00000394269 CRIP1P50238 77 aa8.6□□□□□ -1.03
TCOF1-203ENST00000394269 ZNF664Q8N3J9 261 aa8.6□□□□□ -1.03
TCOF1-203ENST00000394269 TXN2Q99757 166 aa8.6□□□□□ -1.03
TCOF1-203ENST00000394269 MEGF9Q9H1U4 602 aa8.6□□□□□ -1.03
TCOF1-203ENST00000394269 BEX4Q9NWD9 120 aaPredicted RBP8.6□□□□□ -1.03
TCOF1-203ENST00000394269 TRBV7-1A0A0A6YYK4 115 aa8.6□□□□□ -1.03
TCOF1-203ENST00000394269 HBBP68871 147 aa8.6□□□□□ -1.03
TCOF1-203ENST00000394269 JOSD1Q15040 202 aaPredicted RBP8.6□□□□□ -1.03
TCOF1-203ENST00000394269 IL17RELQ6ZVW7 336 aa8.6□□□□□ -1.03
TCOF1-203ENST00000394269 C19orf71A6NCJ1 209 aa8.59□□□□□ -1.03
TCOF1-203ENST00000394269 ZNF138P52744 262 aa8.59□□□□□ -1.03
TCOF1-203ENST00000394269 PMCHL1Q16048 86 aa8.59□□□□□ -1.03
TCOF1-203ENST00000394269 Q5PR19 223 aa8.59□□□□□ -1.03
TCOF1-203ENST00000394269 RBPMS2Q6ZRY4 209 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms