RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 OXLD1Q5BKU9 147 aa6.97□□□□□ -1.29
UPF2-202ENST00000357604 ZNF506Q5JVG8 444 aa6.97□□□□□ -1.29
UPF2-202ENST00000357604 IGF2BP2-AS1Q96M15 143 aa6.97□□□□□ -1.29
UPF2-202ENST00000357604 KLK9Q9UKQ9 250 aa6.97□□□□□ -1.29
UPF2-202ENST00000357604 TRAV12-3A0A0B4J271 114 aa6.96□□□□□ -1.29
UPF2-202ENST00000357604 A0A1B0GW15 77 aa6.96□□□□□ -1.29
UPF2-202ENST00000357604 GCGP01275 180 aa6.96□□□□□ -1.29
UPF2-202ENST00000357604 RNF182Q8N6D2 247 aa6.96□□□□□ -1.29
UPF2-202ENST00000357604 IGHV1OR15-1A0A075B7D0 117 aa6.96□□□□□ -1.3
UPF2-202ENST00000357604 A0A1B0GVG6 124 aa6.96□□□□□ -1.3
UPF2-202ENST00000357604 CIDEAO60543 219 aa6.96□□□□□ -1.3
UPF2-202ENST00000357604 PPP1R17O96001 155 aa6.96□□□□□ -1.3
UPF2-202ENST00000357604 SFTA3P0C7M3 94 aa6.96□□□□□ -1.3
UPF2-202ENST00000357604 TWIST1Q15672 202 aa6.96□□□□□ -1.3
UPF2-202ENST00000357604 GCSAMLQ5JQS6 135 aa6.96□□□□□ -1.3
UPF2-202ENST00000357604 PYGO2Q9BRQ0 406 aa6.96□□□□□ -1.3
UPF2-202ENST00000357604 K7EQG2 157 aa6.96□□□□□ -1.3
UPF2-202ENST00000357604 EXOC3-AS1Q8N2X6 119 aa6.96□□□□□ -1.3
UPF2-202ENST00000357604 OR10G8Q8NGN5 311 aa6.96□□□□□ -1.3
UPF2-202ENST00000357604 OR11H2Q8NH07 326 aa6.96□□□□□ -1.3
UPF2-202ENST00000357604 TMA7Q9Y2S6 64 aaKnown RBP6.96□□□□□ -1.3
UPF2-202ENST00000357604 NDUFB4O95168 129 aa6.96□□□□□ -1.3
UPF2-202ENST00000357604 FAM210AQ96ND0 272 aa6.96□□□□□ -1.3
UPF2-202ENST00000357604 NMBP08949 121 aa6.95□□□□□ -1.3
UPF2-202ENST00000357604 MIFP14174 115 aa6.95□□□□□ -1.3
UPF2-202ENST00000357604 RPL35P42766 123 aaKnown RBP6.95□□□□□ -1.3
UPF2-202ENST00000357604 WDR73Q6P4I2 378 aa6.95□□□□□ -1.3
UPF2-202ENST00000357604 TMEM18Q96B42 140 aa6.95□□□□□ -1.3
UPF2-202ENST00000357604 U3KQK5 164 aa6.95□□□□□ -1.3
UPF2-202ENST00000357604 FAM74A7A6NL05 159 aa6.95□□□□□ -1.3
UPF2-202ENST00000357604 S100A1P23297 94 aa6.95□□□□□ -1.3
UPF2-202ENST00000357604 GNG5P63218 68 aa6.95□□□□□ -1.3
UPF2-202ENST00000357604 IBA57Q5T440 356 aaKnown RBP6.95□□□□□ -1.3
UPF2-202ENST00000357604 WFDC9Q8NEX5 89 aa6.95□□□□□ -1.3
UPF2-202ENST00000357604 OR4C5Q8NGB2 326 aa6.95□□□□□ -1.3
UPF2-202ENST00000357604 ZNF586Q9NXT0 402 aa6.95□□□□□ -1.3
UPF2-202ENST00000357604 DEFA6Q01524 100 aa6.95□□□□□ -1.3
UPF2-202ENST00000357604 SPINK13Q1W4C9 94 aa6.95□□□□□ -1.3
UPF2-202ENST00000357604 SMCO4Q9NRQ5 59 aa6.95□□□□□ -1.3
UPF2-202ENST00000357604 TRGV1A0A0A0MS02 117 aa6.94□□□□□ -1.3
UPF2-202ENST00000357604 TRBV7-9A0A0J9YWB2 115 aa6.94□□□□□ -1.3
UPF2-202ENST00000357604 TMEM183BQ1AE95 376 aa6.94□□□□□ -1.3
UPF2-202ENST00000357604 SH2D6Q7Z4S9 175 aa6.94□□□□□ -1.3
UPF2-202ENST00000357604 CTDSP1Q9GZU7 261 aa6.94□□□□□ -1.3
UPF2-202ENST00000357604 ARID1AO14497 2285 aa6.94□□□□□ -1.3
UPF2-202ENST00000357604 A0A1B0GW64 132 aa6.94□□□□□ -1.3
UPF2-202ENST00000357604 F2Z2F3 143 aa6.94□□□□□ -1.3
UPF2-202ENST00000357604 ZNF56Q15929 161 aa6.94□□□□□ -1.3
UPF2-202ENST00000357604 CYTL1Q9NRR1 136 aa6.94□□□□□ -1.3
UPF2-202ENST00000357604 TET2Q6N021 2002 aaPredicted RBP6.94□□□□□ -1.3
UPF2-202ENST00000357604 NPIPB6E9PJ23 425 aa6.94□□□□□ -1.3
UPF2-202ENST00000357604 NDUFS6O75380 124 aaKnown RBP6.94□□□□□ -1.3
UPF2-202ENST00000357604 Q5BKY6 102 aa6.94□□□□□ -1.3
UPF2-202ENST00000357604 CENPWQ5EE01 88 aa6.94□□□□□ -1.3
UPF2-202ENST00000357604 FXYD5Q96DB9 178 aa6.94□□□□□ -1.3
UPF2-202ENST00000357604 G3V4G9 280 aa6.94□□□□□ -1.3
UPF2-202ENST00000357604 IGKV1D-37A0A075B6S9 117 aa6.93□□□□□ -1.3
UPF2-202ENST00000357604 CCL20P78556 96 aa6.93□□□□□ -1.3
UPF2-202ENST00000357604 SPTBN1Q01082 2364 aaKnown RBP6.93□□□□□ -1.3
UPF2-202ENST00000357604 AKAP13Q12802 2813 aa6.93□□□□□ -1.3
UPF2-202ENST00000357604 C11orf1Q9H5F2 150 aa6.93□□□□□ -1.3
UPF2-202ENST00000357604 AURKAIP1Q9NWT8 199 aaPredicted RBP6.93□□□□□ -1.3
UPF2-202ENST00000357604 TMSB15BA0A087X1C1 80 aa6.93□□□□□ -1.3
UPF2-202ENST00000357604 C9JCJ5 164 aa6.93□□□□□ -1.3
UPF2-202ENST00000357604 ERCC8Q13216 396 aa6.93□□□□□ -1.3
UPF2-202ENST00000357604 TMEM97Q5BJF2 176 aa6.93□□□□□ -1.3
UPF2-202ENST00000357604 TMEM183AQ8IXX5 376 aa6.93□□□□□ -1.3
UPF2-202ENST00000357604 AP1S3Q96PC3 154 aa6.93□□□□□ -1.3
UPF2-202ENST00000357604 RPP21Q9H633 154 aaKnown RBP6.93□□□□□ -1.3
UPF2-202ENST00000357604 NAT8BQ9UHF3 227 aa6.93□□□□□ -1.3
UPF2-202ENST00000357604 RTTNQ86VV8 2226 aa6.93□□□□□ -1.3
UPF2-202ENST00000357604 A0A0J9YX75 114 aa6.93□□□□□ -1.3
UPF2-202ENST00000357604 RHODO00212 210 aa6.93□□□□□ -1.3
UPF2-202ENST00000357604 APOC3P02656 99 aa6.93□□□□□ -1.3
UPF2-202ENST00000357604 Q86TA4 180 aa6.93□□□□□ -1.3
UPF2-202ENST00000357604 RPP25LQ8N5L8 163 aaKnown RBP6.93□□□□□ -1.3
UPF2-202ENST00000357604 TMEM37Q8WXS4 190 aa6.93□□□□□ -1.3
UPF2-202ENST00000357604 MDFIQ99750 246 aa6.93□□□□□ -1.3
UPF2-202ENST00000357604 PRSS46E5RG02 174 aa6.92□□□□□ -1.3
UPF2-202ENST00000357604 TCAPO15273 167 aa6.92□□□□□ -1.3
UPF2-202ENST00000357604 TRAV9-2A0A087WT02 112 aa6.92□□□□□ -1.3
UPF2-202ENST00000357604 SCO2A0A1W2PP80 73 aa6.92□□□□□ -1.3
UPF2-202ENST00000357604 LYRM9A8MSI8 78 aa6.92□□□□□ -1.3
UPF2-202ENST00000357604 PFN1P07737 140 aaKnown RBP6.92□□□□□ -1.3
UPF2-202ENST00000357604 IGHV4-30-4P0DP06 118 aa6.92□□□□□ -1.3
UPF2-202ENST00000357604 MRGPRG-AS1Q2M3A8 158 aa6.92□□□□□ -1.3
UPF2-202ENST00000357604 MUC21Q5SSG8 566 aa6.92□□□□□ -1.3
UPF2-202ENST00000357604 IGFL4Q6B9Z1 124 aa6.92□□□□□ -1.3
UPF2-202ENST00000357604 C9orf47Q6ZRZ4 202 aa6.92□□□□□ -1.3
UPF2-202ENST00000357604 C11orf45Q8TAV5 145 aa6.92□□□□□ -1.3
UPF2-202ENST00000357604 TP53TG1Q9Y2A0 90 aa6.92□□□□□ -1.3
UPF2-202ENST00000357604 TNFRSF18Q9Y5U5 241 aa6.92□□□□□ -1.3
UPF2-202ENST00000357604 NBASA2RRP1 2371 aa6.92□□□□□ -1.3
UPF2-202ENST00000357604 RAB5BP61020 215 aa6.92□□□□□ -1.3
UPF2-202ENST00000357604 DEFB135Q30KP9 77 aa6.92□□□□□ -1.3
UPF2-202ENST00000357604 SAMD5Q5TGI4 173 aa6.92□□□□□ -1.3
UPF2-202ENST00000357604 FER1L6-AS1Q8NA97 138 aa6.92□□□□□ -1.3
UPF2-202ENST00000357604 TMEM170AQ8WVE7 144 aa6.92□□□□□ -1.3
UPF2-202ENST00000357604 FRZBQ92765 325 aa6.92□□□□□ -1.3
UPF2-202ENST00000357604 FAM210BQ96KR6 192 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms