RNA–Protein interactions for RNA: ENST00000323347.14

SMARCD2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2 BASIC

Gene SMARCD2, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-202ENST00000323347 CSN1S1P47710 185 aa12.31□□□□□ -0.44
SMARCD2-202ENST00000323347 RIGQ13278 110 aa12.31□□□□□ -0.44
SMARCD2-202ENST00000323347 SMAD5-AS1Q9Y6J3 95 aa12.31□□□□□ -0.44
SMARCD2-202ENST00000323347 COL6A6A6NMZ7 2263 aa12.31□□□□□ -0.44
SMARCD2-202ENST00000323347 HRNRQ86YZ3 2850 aaPredicted RBP12.3□□□□□ -0.44
SMARCD2-202ENST00000323347 C2orf70A6NJV1 201 aa12.3□□□□□ -0.44
SMARCD2-202ENST00000323347 TCF21O43680 179 aa12.3□□□□□ -0.44
SMARCD2-202ENST00000323347 NTF3P20783 257 aa12.3□□□□□ -0.44
SMARCD2-202ENST00000323347 SAA4P35542 130 aa12.3□□□□□ -0.44
SMARCD2-202ENST00000323347 PMCHL1Q16048 86 aa12.3□□□□□ -0.44
SMARCD2-202ENST00000323347 BPESC1Q9GZL8 116 aa12.3□□□□□ -0.44
SMARCD2-202ENST00000323347 RELNP78509 3460 aa12.29□□□□□ -0.44
SMARCD2-202ENST00000323347 CENPVL3A0A0U1RRI6 287 aa12.29□□□□□ -0.44
SMARCD2-202ENST00000323347 OR2T8A6NH00 312 aa12.29□□□□□ -0.44
SMARCD2-202ENST00000323347 C19orf84I3L1E1 186 aa12.29□□□□□ -0.44
SMARCD2-202ENST00000323347 M0R2Z0 102 aa12.29□□□□□ -0.44
SMARCD2-202ENST00000323347 CHEK1O14757 476 aa12.29□□□□□ -0.44
SMARCD2-202ENST00000323347 DCHS2Q6V1P9 2916 aa12.29□□□□□ -0.44
SMARCD2-202ENST00000323347 A0A087X0K7 114 aa12.29□□□□□ -0.44
SMARCD2-202ENST00000323347 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.29□□□□□ -0.44
SMARCD2-202ENST00000323347 NPFFO15130 113 aa12.29□□□□□ -0.44
SMARCD2-202ENST00000323347 RAB9AP51151 201 aa12.29□□□□□ -0.44
SMARCD2-202ENST00000323347 EBLN2Q6P2I7 272 aa12.29□□□□□ -0.44
SMARCD2-202ENST00000323347 RNASEKQ6P5S7 137 aaKnown RBP12.29□□□□□ -0.44
SMARCD2-202ENST00000323347 ZNF493Q6ZR52 646 aa12.29□□□□□ -0.44
SMARCD2-202ENST00000323347 CRXO43186 299 aaPredicted RBP12.28□□□□□ -0.44
SMARCD2-202ENST00000323347 IGHG4P01861 327 aa12.28□□□□□ -0.44
SMARCD2-202ENST00000323347 SRSF1Q07955 248 aaKnown RBP eCLIP12.28□□□□□ -0.44
SMARCD2-202ENST00000323347 ATP6V0BQ99437 205 aa12.28□□□□□ -0.44
SMARCD2-202ENST00000323347 ZFAND3Q9H8U3 227 aa12.28□□□□□ -0.44
SMARCD2-202ENST00000323347 ABCA1O95477 2261 aa12.28□□□□□ -0.44
SMARCD2-202ENST00000323347 ATP6V0E1O15342 81 aa12.27□□□□□ -0.44
SMARCD2-202ENST00000323347 GOSR1O95249 250 aa12.27□□□□□ -0.44
SMARCD2-202ENST00000323347 IGHV3-23P01764 117 aa12.27□□□□□ -0.44
SMARCD2-202ENST00000323347 CT45A10P0DMU9 189 aa12.27□□□□□ -0.44
SMARCD2-202ENST00000323347 PAX8Q06710 450 aa12.27□□□□□ -0.44
SMARCD2-202ENST00000323347 UNQ5815/PRO19632Q6UWF5 114 aa12.27□□□□□ -0.44
SMARCD2-202ENST00000323347 PIP4P2Q8N4L2 257 aa12.27□□□□□ -0.44
SMARCD2-202ENST00000323347 C20orf202A1L168 122 aa12.27□□□□□ -0.45
SMARCD2-202ENST00000323347 K7EP13 123 aa12.27□□□□□ -0.45
SMARCD2-202ENST00000323347 ARMS2P0C7Q2 107 aa12.27□□□□□ -0.45
SMARCD2-202ENST00000323347 SRSF2Q01130 221 aaKnown RBP12.27□□□□□ -0.45
SMARCD2-202ENST00000323347 SPATA45Q537H7 98 aa12.27□□□□□ -0.45
SMARCD2-202ENST00000323347 C8orf49Q96NF6 230 aa12.27□□□□□ -0.45
SMARCD2-202ENST00000323347 LRBAP50851 2863 aa12.27□□□□□ -0.45
SMARCD2-202ENST00000323347 OR5AL1P0C617 328 aa12.26□□□□□ -0.45
SMARCD2-202ENST00000323347 GNLYP22749 145 aa12.26□□□□□ -0.45
SMARCD2-202ENST00000323347 UQCRFS1P47985 274 aa12.26□□□□□ -0.45
SMARCD2-202ENST00000323347 CRIP2P52943 208 aaPredicted RBP12.26□□□□□ -0.45
SMARCD2-202ENST00000323347 C15orf32Q32M92 178 aa12.26□□□□□ -0.45
SMARCD2-202ENST00000323347 PRR25Q96S07 402 aa12.26□□□□□ -0.45
SMARCD2-202ENST00000323347 TMUB1Q9BVT8 246 aa12.26□□□□□ -0.45
SMARCD2-202ENST00000323347 PTPN13Q12923 2485 aa12.26□□□□□ -0.45
SMARCD2-202ENST00000323347 IGLC3P0DOY3 106 aa12.25□□□□□ -0.45
SMARCD2-202ENST00000323347 RHOGP84095 191 aa12.25□□□□□ -0.45
SMARCD2-202ENST00000323347 C5orf56Q8N8D9 126 aa12.25□□□□□ -0.45
SMARCD2-202ENST00000323347 BUB3O43684 328 aa12.25□□□□□ -0.45
SMARCD2-202ENST00000323347 IGHV4-39P01824 125 aa12.25□□□□□ -0.45
SMARCD2-202ENST00000323347 C19orf54Q5BKX5 351 aa12.25□□□□□ -0.45
SMARCD2-202ENST00000323347 KLHDC1Q8N7A1 406 aa12.25□□□□□ -0.45
SMARCD2-202ENST00000323347 ORAOV1Q8WV07 137 aa12.25□□□□□ -0.45
SMARCD2-202ENST00000323347 UQCR10Q9UDW1 63 aa12.25□□□□□ -0.45
SMARCD2-202ENST00000323347 IGHV1-24A0A0C4DH33 117 aa12.24□□□□□ -0.45
SMARCD2-202ENST00000323347 TMEM189A5PLL7 270 aa12.24□□□□□ -0.45
SMARCD2-202ENST00000323347 SH2D1AO60880 128 aa12.24□□□□□ -0.45
SMARCD2-202ENST00000323347 RPS20P60866 119 aaKnown RBP12.24□□□□□ -0.45
SMARCD2-202ENST00000323347 SVIPQ8NHG7 77 aa12.24□□□□□ -0.45
SMARCD2-202ENST00000323347 RNASE8Q8TDE3 154 aaKnown RBP12.24□□□□□ -0.45
SMARCD2-202ENST00000323347 CCDC140Q96MF4 163 aa12.24□□□□□ -0.45
SMARCD2-202ENST00000323347 PSMG3-AS1Q96PY0 264 aa12.24□□□□□ -0.45
SMARCD2-202ENST00000323347 TMEM70Q9BUB7 260 aa12.24□□□□□ -0.45
SMARCD2-202ENST00000323347 TRBV7-1A0A0A6YYK4 115 aa12.23□□□□□ -0.45
SMARCD2-202ENST00000323347 CLPSL1A2RUU4 121 aa12.23□□□□□ -0.45
SMARCD2-202ENST00000323347 CLEC3BP05452 202 aa12.23□□□□□ -0.45
SMARCD2-202ENST00000323347 GPR183P32249 361 aa12.23□□□□□ -0.45
SMARCD2-202ENST00000323347 ECSCRQ19T08 205 aa12.23□□□□□ -0.45
SMARCD2-202ENST00000323347 SMIM15Q7Z3B0 74 aa12.23□□□□□ -0.45
SMARCD2-202ENST00000323347 ASCL2Q99929 193 aa12.23□□□□□ -0.45
SMARCD2-202ENST00000323347 CHTOPQ9Y3Y2 248 aaKnown RBP12.23□□□□□ -0.45
SMARCD2-202ENST00000323347 U3KQK5 164 aa12.23□□□□□ -0.45
SMARCD2-202ENST00000323347 TRAV9-2A0A087WT02 112 aa12.23□□□□□ -0.45
SMARCD2-202ENST00000323347 IGKV2-40A0A087WW87 121 aaPredicted RBP12.23□□□□□ -0.45
SMARCD2-202ENST00000323347 RBAKDNA6NC62 111 aa12.23□□□□□ -0.45
SMARCD2-202ENST00000323347 IGKV2D-40P01614 121 aaPredicted RBP12.23□□□□□ -0.45
SMARCD2-202ENST00000323347 BMI1P35226 326 aa12.23□□□□□ -0.45
SMARCD2-202ENST00000323347 LCN12Q6JVE5 192 aa12.23□□□□□ -0.45
SMARCD2-202ENST00000323347 EEF1AKMT3Q96AZ1 226 aa12.23□□□□□ -0.45
SMARCD2-202ENST00000323347 U3KQE9 123 aa12.23□□□□□ -0.45
SMARCD2-202ENST00000323347 MEGF9Q9H1U4 602 aa12.22□□□□□ -0.45
SMARCD2-202ENST00000323347 USP9XQ93008 2570 aaPredicted RBP12.22□□□□□ -0.45
SMARCD2-202ENST00000323347 NBASA2RRP1 2371 aa12.21□□□□□ -0.45
SMARCD2-202ENST00000323347 LINC01548A6NM66 108 aa12.21□□□□□ -0.45
SMARCD2-202ENST00000323347 PTTG1IPP53801 180 aa12.21□□□□□ -0.45
SMARCD2-202ENST00000323347 ZNF575Q86XF7 245 aa12.21□□□□□ -0.45
SMARCD2-202ENST00000323347 PIFOQ8TCI5 191 aa12.21□□□□□ -0.45
SMARCD2-202ENST00000323347 SLC50A1Q9BRV3 221 aa12.21□□□□□ -0.45
SMARCD2-202ENST00000323347 IGHV1-69DA0A0B4J2H0 117 aa12.21□□□□□ -0.46
SMARCD2-202ENST00000323347 G3V318 75 aa12.21□□□□□ -0.46
SMARCD2-202ENST00000323347 M0QZ24 198 aa12.21□□□□□ -0.46
SMARCD2-202ENST00000323347 BRI3O95415 125 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms