RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Tpsb2P21845 276 aa13.03□□□□□ -0.32
Trim39-203ENSMUST00000113706 Rpl31P62900 125 aaKnown RBP13.03□□□□□ -0.32
Trim39-203ENSMUST00000113706 Defb20Q30KP3 96 aa13.03□□□□□ -0.32
Trim39-203ENSMUST00000113706 Psg27Q497W2 474 aa13.03□□□□□ -0.32
Trim39-203ENSMUST00000113706 RhebQ921J2 184 aa13.03□□□□□ -0.32
Trim39-203ENSMUST00000113706 Nxph4G3X9N5 304 aa13.02□□□□□ -0.32
Trim39-203ENSMUST00000113706 Ucp1P12242 307 aa13.02□□□□□ -0.32
Trim39-203ENSMUST00000113706 Lyz1P17897 148 aa13.02□□□□□ -0.32
Trim39-203ENSMUST00000113706 Fgf8P37237 268 aa13.02□□□□□ -0.32
Trim39-203ENSMUST00000113706 Dvl1P51141 695 aa13.02□□□□□ -0.32
Trim39-203ENSMUST00000113706 Gpr4Q8BUD0 365 aa13.02□□□□□ -0.32
Trim39-203ENSMUST00000113706 Mob3bQ8VE04 216 aa13.02□□□□□ -0.32
Trim39-203ENSMUST00000113706 Olfr1202Q8VF98 309 aa13.02□□□□□ -0.32
Trim39-203ENSMUST00000113706 Trav12d-1A0N8R0 115 aa13.02□□□□□ -0.33
Trim39-203ENSMUST00000113706 Gm15128A2ADW8 449 aa13.02□□□□□ -0.33
Trim39-203ENSMUST00000113706 Gm15080A2BI02 449 aa13.02□□□□□ -0.33
Trim39-203ENSMUST00000113706 Gm15093A2BI72 449 aa13.02□□□□□ -0.33
Trim39-203ENSMUST00000113706 Luzp4B1AV09 449 aa13.02□□□□□ -0.33
Trim39-203ENSMUST00000113706 Gm15107B1B0X0 449 aa13.02□□□□□ -0.33
Trim39-203ENSMUST00000113706 Vmn1r224E9PWK2 298 aa13.02□□□□□ -0.33
Trim39-203ENSMUST00000113706 Gm15097E9QA14 449 aa13.02□□□□□ -0.33
Trim39-203ENSMUST00000113706 Lhx4P53776 390 aa13.02□□□□□ -0.33
Trim39-203ENSMUST00000113706 FusP56959 518 aaKnown RBP13.02□□□□□ -0.33
Trim39-203ENSMUST00000113706 Slc45a2P58355 530 aa13.02□□□□□ -0.33
Trim39-203ENSMUST00000113706 Rnf150Q5DTZ6 437 aa13.02□□□□□ -0.33
Trim39-203ENSMUST00000113706 Gm15085Q62012 449 aa13.02□□□□□ -0.33
Trim39-203ENSMUST00000113706 Vkorc1l1Q6TEK5 176 aa13.02□□□□□ -0.33
Trim39-203ENSMUST00000113706 Zfp85Q7TMC9 473 aa13.02□□□□□ -0.33
Trim39-203ENSMUST00000113706 Ankrd55Q8BLD6 626 aa13.02□□□□□ -0.33
Trim39-203ENSMUST00000113706 C1qtnf4Q8R066 326 aa13.02□□□□□ -0.33
Trim39-203ENSMUST00000113706 FuomQ8R2K1 153 aa13.02□□□□□ -0.33
Trim39-203ENSMUST00000113706 Rnf151Q9CQ29 239 aa13.02□□□□□ -0.33
Trim39-203ENSMUST00000113706 Tspan4Q9DCK3 238 aa13.02□□□□□ -0.33
Trim39-203ENSMUST00000113706 Ccl8Q9Z121 97 aa13.02□□□□□ -0.33
Trim39-203ENSMUST00000113706 Hcfc1Q61191 2045 aaKnown RBP13.02□□□□□ -0.33
Trim39-203ENSMUST00000113706 Cdc34bA0A140T8I4 237 aa13.01□□□□□ -0.33
Trim39-203ENSMUST00000113706 Ascl5M0QWB7 188 aa13.01□□□□□ -0.33
Trim39-203ENSMUST00000113706 G6pcP35576 357 aa13.01□□□□□ -0.33
Trim39-203ENSMUST00000113706 Vmn1r128L7N2B4 307 aa13.01□□□□□ -0.33
Trim39-203ENSMUST00000113706 Defa-rs7P50715 91 aa13.01□□□□□ -0.33
Trim39-203ENSMUST00000113706 Serf2P84102 59 aa13.01□□□□□ -0.33
Trim39-203ENSMUST00000113706 CluQ06890 448 aa13.01□□□□□ -0.33
Trim39-203ENSMUST00000113706 Cdkn2aQ64364 169 aa13.01□□□□□ -0.33
Trim39-203ENSMUST00000113706 Olfr1509Q7TQQ0 308 aa13.01□□□□□ -0.33
Trim39-203ENSMUST00000113706 Olfr1356Q7TQU8 320 aa13.01□□□□□ -0.33
Trim39-203ENSMUST00000113706 Znf787Q8BIF9 381 aa13.01□□□□□ -0.33
Trim39-203ENSMUST00000113706 Smco3Q8BQM7 225 aa13.01□□□□□ -0.33
Trim39-203ENSMUST00000113706 Q8VC23 124 aa13.01□□□□□ -0.33
Trim39-203ENSMUST00000113706 Olfr654Q8VF27 341 aa13.01□□□□□ -0.33
Trim39-203ENSMUST00000113706 Nkg7Q99PA5 165 aa13.01□□□□□ -0.33
Trim39-203ENSMUST00000113706 Olfr465-ps1A0A0U1RPZ4 315 aa13.01□□□□□ -0.33
Trim39-203ENSMUST00000113706 Pglyrp3A1A547 347 aa13.01□□□□□ -0.33
Trim39-203ENSMUST00000113706 B1ARW8 110 aa13.01□□□□□ -0.33
Trim39-203ENSMUST00000113706 SncaO55042 140 aaKnown RBP13.01□□□□□ -0.33
Trim39-203ENSMUST00000113706 Tcstv1O70619 171 aa13.01□□□□□ -0.33
Trim39-203ENSMUST00000113706 Olfr987Q7TRA2 309 aa13.01□□□□□ -0.33
Trim39-203ENSMUST00000113706 A930004D18RikQ8C8W7 157 aa13.01□□□□□ -0.33
Trim39-203ENSMUST00000113706 Sval2Q99N75 144 aa13.01□□□□□ -0.33
Trim39-203ENSMUST00000113706 Vmn1r54Q9EPB8 315 aa13.01□□□□□ -0.33
Trim39-203ENSMUST00000113706 ApohQ01339 345 aa13□□□□□ -0.33
Trim39-203ENSMUST00000113706 Npy1rQ04573 382 aa13□□□□□ -0.33
Trim39-203ENSMUST00000113706 Nhlh2Q64221 135 aa13□□□□□ -0.33
Trim39-203ENSMUST00000113706 Ypel4Q65Z93 127 aa13□□□□□ -0.33
Trim39-203ENSMUST00000113706 ErasQ7TN89 227 aa13□□□□□ -0.33
Trim39-203ENSMUST00000113706 Slc37a1Q8R070 531 aa13□□□□□ -0.33
Trim39-203ENSMUST00000113706 Olfr639Q8VGY8 316 aa13□□□□□ -0.33
Trim39-203ENSMUST00000113706 Rer1Q9CQU3 196 aaKnown RBP13□□□□□ -0.33
Trim39-203ENSMUST00000113706 Gtsf1Q9DAN6 167 aa13□□□□□ -0.33
Trim39-203ENSMUST00000113706 Adgrg4B7ZCC9 3073 aa13□□□□□ -0.33
Trim39-203ENSMUST00000113706 Tnfaip6O08859 275 aa13□□□□□ -0.33
Trim39-203ENSMUST00000113706 Fut1O09160 376 aa13□□□□□ -0.33
Trim39-203ENSMUST00000113706 Id3P41133 119 aa13□□□□□ -0.33
Trim39-203ENSMUST00000113706 Rab2aP53994 212 aa13□□□□□ -0.33
Trim39-203ENSMUST00000113706 Ube2d2bQ6ZWY6 147 aa13□□□□□ -0.33
Trim39-203ENSMUST00000113706 Mrps26Q80ZS3 200 aa13□□□□□ -0.33
Trim39-203ENSMUST00000113706 Rab39bQ8BHC1 213 aa13□□□□□ -0.33
Trim39-203ENSMUST00000113706 Znf146Q8BQN6 292 aa13□□□□□ -0.33
Trim39-203ENSMUST00000113706 Tmem41bQ8K1A5 291 aa13□□□□□ -0.33
Trim39-203ENSMUST00000113706 Olfr1462Q8VFW3 307 aa13□□□□□ -0.33
Trim39-203ENSMUST00000113706 Mrpl3Q99N95 348 aa13□□□□□ -0.33
Trim39-203ENSMUST00000113706 Rnf115Q9D0C1 305 aa13□□□□□ -0.33
Trim39-203ENSMUST00000113706 Ap1s2Q9DB50 160 aa13□□□□□ -0.33
Trim39-203ENSMUST00000113706 Olfr893K7N678 312 aa13□□□□□ -0.33
Trim39-203ENSMUST00000113706 Taar5Q5QD14 337 aa13□□□□□ -0.33
Trim39-203ENSMUST00000113706 CrhQ8CIT0 187 aa13□□□□□ -0.33
Trim39-203ENSMUST00000113706 Olfr1411Q8VFC4 323 aa13□□□□□ -0.33
Trim39-203ENSMUST00000113706 Olfr492Q8VFD1 314 aa13□□□□□ -0.33
Trim39-203ENSMUST00000113706 Lhfpl3Q9CTN8 222 aa13□□□□□ -0.33
Trim39-203ENSMUST00000113706 Cox20Q9D7J4 117 aa13□□□□□ -0.33
Trim39-203ENSMUST00000113706 Znf22Q9ERU3 237 aa13□□□□□ -0.33
Trim39-203ENSMUST00000113706 1700003H04RikE9PXM2 192 aa12.99□□□□□ -0.33
Trim39-203ENSMUST00000113706 Tnfsf12O54907 249 aa12.99□□□□□ -0.33
Trim39-203ENSMUST00000113706 Olfr328Q5NCD3 310 aa12.99□□□□□ -0.33
Trim39-203ENSMUST00000113706 AgaQ64191 346 aa12.99□□□□□ -0.33
Trim39-203ENSMUST00000113706 Olfr112Q8C0S2 320 aa12.99□□□□□ -0.33
Trim39-203ENSMUST00000113706 Trbv12-2A0A0B4J1H1 124 aa12.99□□□□□ -0.33
Trim39-203ENSMUST00000113706 P01723 117 aa12.99□□□□□ -0.33
Trim39-203ENSMUST00000113706 Tmem52bQ0VBF2 186 aa12.99□□□□□ -0.33
Trim39-203ENSMUST00000113706 Lypd6Q8BPP5 171 aa12.99□□□□□ -0.33
Trim39-203ENSMUST00000113706 Chrdl1Q920C1 447 aa12.99□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 55.8 ms