RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Mixl1Q9WUI0 231 aa9.45□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Dock9Q8BIK4 2055 aa9.45□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Olfr1016A2ASV2 309 aa9.45□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Olfr905L7N1X5 310 aa9.45□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Gimap1P70224 277 aa9.45□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Wbp1P97764 304 aa9.45□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Zglp1Q1WG82 266 aa9.45□□□□□ -0.9
Scn8a-203ENSMUST00000108908 RetnlgQ8K426 117 aa9.45□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Olfr476Q8VGI4 310 aa9.45□□□□□ -0.9
Scn8a-203ENSMUST00000108908 AmtnQ9D3J8 213 aa9.45□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Gm44596A0A0N4SVA0 210 aa9.45□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Gm2381G3UY53 305 aa9.45□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Sult2a5K7N6K9 285 aa9.45□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Gpr183Q3U6B2 357 aa9.45□□□□□ -0.9
Scn8a-203ENSMUST00000108908 BC049730Q810N3 246 aa9.45□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Rbfox2Q8BP71 449 aaKnown RBP9.45□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Olfr877Q8VF62 311 aa9.45□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Olfr873Q8VFJ0 319 aa9.45□□□□□ -0.9
Scn8a-203ENSMUST00000108908 A930017K11RikE0CXQ2 571 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Gm21244J3QK38 227 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Tmem212Q8C6V3 187 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Olfr972Q9EQA2 314 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 MpdzQ8VBX6 2055 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 ElobP62869 118 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Zfp92Q62396 488 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Olfr1204Q7TR10 309 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Lrtm1Q8BXQ3 356 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Cypt1Q8CH20 168 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 9130008F23RikQ9D2Z6 181 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Q9DAL9 119 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Slc25a20Q9Z2Z6 301 aaKnown RBP9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Esp4A8R0T8 117 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Smim9Q3V0X1 137 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Slc35e4Q8K3D6 351 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Rab29Q91YQ1 204 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Trem3Q9JKE1 183 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Klk1b27Q9JM71 263 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Cldn10Q9Z0S6 231 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 TracA0A075B662 137 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Tcf21O35437 179 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 P01634 136 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Ccl2P10148 148 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Serf2P84102 59 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Zfp874bQ7M6X2 447 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Wfdc21Q8BTE6 63 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Olfr1336Q8VGH5 314 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Tspan2Q922J6 221 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Olfr894Q9EQB2 313 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 DeddQ9Z1L3 318 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Olfr715bE9Q725 315 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Olfr432E9Q8M2 312 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Meox2P32443 303 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Znf48Q3US17 591 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 PigpQ9JHG1 132 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Chst5Q9QUP4 395 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Gm28845A0A087WR76 214 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Defa30E9QPZ2 93 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 MyadmO35682 320 aaKnown RBP9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Vdac1Q60932 296 aaKnown RBP9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Srrm4Q8BKA3 608 aa9.44□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Ighv7-3A0A075B5R2 120 aa9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Lnp1A0A1B0GSK3 178 aa9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Vmn1r232A2RTT5 351 aa9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 P01759 136 aa9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Sox15P43267 231 aa9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Prrg4Q8BGN6 226 aa9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Scnm1Q8K136 229 aa9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Nabp2Q8R2Y9 212 aa9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Vwa8Q8CC88 1905 aa9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Igsf23B2RTN2 239 aa9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Gm5741B2RVA4 72 aa9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Sult2a4L7N245 285 aa9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Olfr1441Q8VFV3 318 aa9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Pam16Q9CQV1 125 aa9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 3100002H09RikQ9CXW6 140 aa9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Fbxo25Q9D2Y6 357 aa9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Hoxa3P02831 443 aa9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Eva1aQ91WM6 156 aa9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Ighv14-2A0A075B5R7 117 aa9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Csrp2P97314 193 aaKnown RBP9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Mpdu1Q9R0Q9 247 aa9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Gpr34Q9R1K6 375 aa9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 RhovQ8VDU1 236 aa9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Olfr1002Q8VFK2 318 aa9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 1700013G24RikQ9DAC6 286 aa9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Gm44973A0A140LJJ1 189 aa9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Platr25A0A1Y7VIZ1 466 aa9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Slc17a3G3UWD9 498 aa9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Gm19345G3UYD9 124 aa9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 G6pcP35576 357 aa9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Q0VG49 157 aa9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Q149G0 166 aaKnown RBP9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Tmem88bQ3TYP4 173 aa9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Ssbp4Q3U4B1 363 aa9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Btf3Q64152 204 aaKnown RBP9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Uqcc3Q8K2T4 89 aa9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Nkg7Q99PA5 165 aa9.43□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Rai1Q61818 1889 aa9.42□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Gm45753A0A1C7CYU8 86 aa9.42□□□□□ -0.9
Scn8a-203ENSMUST00000108908 Slc25a53A2AF28 346 aa9.42□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 57 ms