RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Frem1Q684R7 2191 aa12.48□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Olfr284A0A0U1RP76 321 aa12.48□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 AsmtD3KU66 387 aa12.48□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Gm8677K9J7G9 307 aa12.48□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 SncaO55042 140 aaKnown RBP12.48□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Fgf7P36363 194 aa12.48□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Ovch2Q7M761 609 aa12.48□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Hist3h2bbQ8CGP0 126 aa12.48□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Prss28Q924N9 274 aa12.48□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Sfxn4Q925N1 313 aa12.48□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Q9CQM1 111 aa12.48□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Hist3h2baQ9D2U9 126 aa12.48□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Arl13aQ9D416 372 aa12.48□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Znf22Q9ERU3 237 aa12.48□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Znf385cA2A5E6 429 aa12.47□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Awat1A2ADU9 328 aa12.47□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Olfr1356Q7TQU8 320 aa12.47□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Harbi1Q8BR93 349 aa12.47□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Mrpl41Q9CQN7 135 aaKnown RBP12.47□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Bpifa5Q9CQX3 270 aa12.47□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Slc25a15Q9WVD5 301 aa12.47□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Col6a6Q8C6K9 2265 aa12.47□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Vmn1r113G3UWI8 307 aa12.47□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Ifitm7G3X9Z2 141 aa12.47□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Bmpr1bP36898 502 aa12.47□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Zfp72Q0VFY0 435 aa12.47□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Pcnx2Q5DU28 2122 aa12.47□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Tusc5Q8C838 173 aa12.47□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Cdc34Q8CFI2 235 aa12.47□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 SpartQ8R1X6 671 aa12.47□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Sfxn3Q91V61 321 aa12.47□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 CenpmQ9CQA0 180 aa12.47□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 St6galnac6Q9JM95 333 aa12.47□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Kcnip3Q9QXT8 256 aa12.47□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Gm20773A0A0A6YXW2 232 aa12.46□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Gm20807A0A0A6YXX7 232 aa12.46□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Gm20873J3QMQ9 232 aa12.46□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Gm20795J3QP49 232 aa12.46□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Gm21310J3QQ23 232 aa12.46□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 P01796 113 aa12.46□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 P01797 113 aa12.46□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 P01799 113 aa12.46□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Zfp58P16372 489 aa12.46□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Gm21440Q3TTD8 232 aa12.46□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 MyocosQ3UWS6 143 aa12.46□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 TpppQ7TQD2 218 aaKnown RBP12.46□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Vmn1r26Q8R2D7 339 aa12.46□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 H2afb1Q9CQ70 111 aa12.46□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Pate4Q09098 99 aa12.46□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Pld4Q8BG07 503 aa12.46□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Scp2d1Q9DAH1 156 aa12.46□□□□□ -0.41
Nkx3-1-201ENSMUST00000022646 Trbv13-3A0A0B4J1H2 113 aa12.46□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Zfp976E9Q981 636 aa12.46□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 NgfP01139 241 aa12.46□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Ube2g2P60605 165 aa12.46□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Rhox4gQ2MDF7 205 aa12.46□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Rhox4dQ2MDG0 205 aa12.46□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Slc25a31Q3V132 320 aa12.46□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Rhox4eQ504P9 205 aa12.46□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Psg17Q62056 475 aa12.46□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Tff3Q62395 81 aa12.46□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Wdr83osQ6ZWX0 106 aa12.46□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Kazald1Q8BJ66 313 aa12.46□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Ms4a3Q920C4 213 aa12.46□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Mad2l1bpQ9DCX1 276 aa12.46□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Rhox4bQ9JI43 205 aa12.46□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Dmxl2Q8BPN8 3032 aa12.45□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Olfr282A1L1B4 308 aa12.45□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Nkx2-8O70584 235 aa12.45□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Cd46O88174 365 aa12.45□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 TymsP07607 307 aa12.45□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Pax5Q02650 391 aa12.45□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Tmem40Q4FJU9 225 aa12.45□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Olfr25Q7TRD6 313 aa12.45□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Olfr1184Q8VG86 311 aa12.45□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Sh3bgrl3Q91VW3 93 aa12.45□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Barx1Q9ER42 254 aa12.45□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Mbnl1Q9JKP5 341 aaKnown RBP12.45□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Med12lQ8BQM9 2157 aa12.45□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 BC053393A0A0B4J1F6 192 aa12.45□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Rdh16O54909 317 aa12.45□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 OpalinQ7M750 143 aa12.45□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Gm8653K9J7G2 307 aa12.44□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Vmn1r117L7N2C9 307 aa12.44□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Tnfsf12O54907 249 aa12.44□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 TcapO70548 167 aa12.44□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Cst7O89098 144 aa12.44□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 NotoQ5TIS6 240 aa12.44□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Olfr924Q7TRB8 308 aa12.44□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Psg22Q810J1 475 aa12.44□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Olfr1294Q8VGE5 312 aa12.44□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Eaf1Q9D4C5 268 aa12.44□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Gm28845A0A087WR76 214 aa12.44□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Lgals9O08573 353 aaKnown RBP12.44□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Dpagt1P42867 410 aa12.44□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Ypel2Q65Z95 119 aa12.44□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Spcs3Q6ZWQ7 180 aa12.44□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Ss18l1Q8BW22 402 aa12.44□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Gm12666A2AMD0 254 aaKnown RBP12.44□□□□□ -0.42
Nkx3-1-201ENSMUST00000022646 Olfr1328B1ARV2 313 aa12.44□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 82.8 ms