RNA–Protein interactions for RNA: ENST00000564511.1

TUBGCP4-209, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-209ENST00000564511 LINC00052Q96N35 136 aa3.58□□□□□ -1.84
TUBGCP4-209ENST00000564511 C7orf50Q9BRJ6 194 aaKnown RBP3.58□□□□□ -1.84
TUBGCP4-209ENST00000564511 ZNF2Q9BSG1 426 aaPredicted RBP3.58□□□□□ -1.84
TUBGCP4-209ENST00000564511 PARD6GQ9BYG4 376 aaPredicted RBP3.58□□□□□ -1.84
TUBGCP4-209ENST00000564511 NKX6-2Q9C056 277 aaPredicted RBP3.58□□□□□ -1.84
TUBGCP4-209ENST00000564511 NAA50Q9GZZ1 169 aaKnown RBP3.58□□□□□ -1.84
TUBGCP4-209ENST00000564511 FKBP11Q9NYL4 201 aa3.58□□□□□ -1.84
TUBGCP4-209ENST00000564511 COMMD9Q9P000 198 aa3.58□□□□□ -1.84
TUBGCP4-209ENST00000564511 PRNDQ9UKY0 176 aa3.58□□□□□ -1.84
TUBGCP4-209ENST00000564511 LINC00588Q9Y4M8 146 aa3.58□□□□□ -1.84
TUBGCP4-209ENST00000564511 FAT4Q6V0I7 4981 aa3.58□□□□□ -1.84
TUBGCP4-209ENST00000564511 IFITM5A6NNB3 132 aa3.57□□□□□ -1.84
TUBGCP4-209ENST00000564511 TMEM238C9JI98 176 aa3.57□□□□□ -1.84
TUBGCP4-209ENST00000564511 FAM90A26D6RGX4 464 aa3.57□□□□□ -1.84
TUBGCP4-209ENST00000564511 PTGES3LE9PB15 166 aa3.57□□□□□ -1.84
TUBGCP4-209ENST00000564511 ARPC5O15511 151 aa3.57□□□□□ -1.84
TUBGCP4-209ENST00000564511 DLEU1O43261 78 aa3.57□□□□□ -1.84
TUBGCP4-209ENST00000564511 IFNA5P01569 189 aa3.57□□□□□ -1.84
TUBGCP4-209ENST00000564511 APOC3P02656 99 aa3.57□□□□□ -1.84
TUBGCP4-209ENST00000564511 DEFB130BP0DP73 79 aa3.57□□□□□ -1.84
TUBGCP4-209ENST00000564511 DEFB130AP0DP74 79 aa3.57□□□□□ -1.84
TUBGCP4-209ENST00000564511 HLA-DRB4P13762 266 aa3.57□□□□□ -1.84
TUBGCP4-209ENST00000564511 S100A2P29034 98 aa3.57□□□□□ -1.84
TUBGCP4-209ENST00000564511 SNCAP37840 140 aa3.57□□□□□ -1.84
TUBGCP4-209ENST00000564511 OR10A3P58181 314 aa3.57□□□□□ -1.84
TUBGCP4-209ENST00000564511 DEFB1P60022 68 aa3.57□□□□□ -1.84
TUBGCP4-209ENST00000564511 ERHP84090 104 aaKnown RBP3.57□□□□□ -1.84
TUBGCP4-209ENST00000564511 RRN3P1Q2M238 152 aa3.57□□□□□ -1.84
TUBGCP4-209ENST00000564511 TTC32Q5I0X7 151 aa3.57□□□□□ -1.84
TUBGCP4-209ENST00000564511 SPANXN2Q5MJ10 180 aa3.57□□□□□ -1.84
TUBGCP4-209ENST00000564511 SERTAD4-AS1Q5TG53 156 aa3.57□□□□□ -1.84
TUBGCP4-209ENST00000564511 GDF5OSQ5U4N7 250 aa3.57□□□□□ -1.84
TUBGCP4-209ENST00000564511 LAIR2Q6ISS4 152 aa3.57□□□□□ -1.84
TUBGCP4-209ENST00000564511 SNX29P2Q8IUI4 249 aa3.57□□□□□ -1.84
TUBGCP4-209ENST00000564511 C9orf62Q8N4C0 152 aa3.57□□□□□ -1.84
TUBGCP4-209ENST00000564511 ARRDC1Q8N5I2 433 aa3.57□□□□□ -1.84
TUBGCP4-209ENST00000564511 DHRSXQ8N5I4 330 aa3.57□□□□□ -1.84
TUBGCP4-209ENST00000564511 BEST4Q8NFU0 473 aa3.57□□□□□ -1.84
TUBGCP4-209ENST00000564511 OR4B1Q8NGF8 309 aa3.57□□□□□ -1.84
TUBGCP4-209ENST00000564511 RRNAD1Q96FB5 475 aaKnown RBP3.57□□□□□ -1.84
TUBGCP4-209ENST00000564511 UHRF2Q96PU4 802 aa3.57□□□□□ -1.84
TUBGCP4-209ENST00000564511 TMEM208Q9BTX3 173 aa3.57□□□□□ -1.84
TUBGCP4-209ENST00000564511 SLC35B3Q9H1N7 401 aa3.57□□□□□ -1.84
TUBGCP4-209ENST00000564511 Q9H3A6 140 aa3.57□□□□□ -1.84
TUBGCP4-209ENST00000564511 LSM2Q9Y333 95 aaKnown RBP3.57□□□□□ -1.84
TUBGCP4-209ENST00000564511 HLA-DRB4X5D2U9 266 aa3.57□□□□□ -1.84
TUBGCP4-209ENST00000564511 CBY3A6NI87 242 aa3.56□□□□□ -1.84
TUBGCP4-209ENST00000564511 PDCD5O14737 125 aa3.56□□□□□ -1.84
TUBGCP4-209ENST00000564511 PGLYRP1O75594 196 aaPredicted RBP3.56□□□□□ -1.84
TUBGCP4-209ENST00000564511 PRM2P04554 102 aa3.56□□□□□ -1.84
TUBGCP4-209ENST00000564511 RLN1P04808 185 aa3.56□□□□□ -1.84
TUBGCP4-209ENST00000564511 METTL15P1P0C7V9 234 aa3.56□□□□□ -1.84
TUBGCP4-209ENST00000564511 MYL9P24844 172 aa3.56□□□□□ -1.84
TUBGCP4-209ENST00000564511 PSMA1P25786 263 aaKnown RBP3.56□□□□□ -1.84
TUBGCP4-209ENST00000564511 DDTP30046 118 aa3.56□□□□□ -1.84
TUBGCP4-209ENST00000564511 GABARAPL2P60520 117 aa3.56□□□□□ -1.84
TUBGCP4-209ENST00000564511 SNRPEP62304 92 aaKnown RBP3.56□□□□□ -1.84
TUBGCP4-209ENST00000564511 FABP5Q01469 135 aa3.56□□□□□ -1.84
TUBGCP4-209ENST00000564511 PIK3CD-AS1Q5SR53 167 aa3.56□□□□□ -1.84
TUBGCP4-209ENST00000564511 LPCAT3Q6P1A2 487 aa3.56□□□□□ -1.84
TUBGCP4-209ENST00000564511 C1orf158Q8N1D5 194 aa3.56□□□□□ -1.84
TUBGCP4-209ENST00000564511 ZNF114Q8NC26 417 aa3.56□□□□□ -1.84
TUBGCP4-209ENST00000564511 OR2D3Q8NGH3 330 aa3.56□□□□□ -1.84
TUBGCP4-209ENST00000564511 OR4A16Q8NH70 328 aa3.56□□□□□ -1.84
TUBGCP4-209ENST00000564511 LGALS14Q8TCE9 139 aa3.56□□□□□ -1.84
TUBGCP4-209ENST00000564511 GLYATL2Q8WU03 294 aa3.56□□□□□ -1.84
TUBGCP4-209ENST00000564511 AP3S1Q92572 193 aa3.56□□□□□ -1.84
TUBGCP4-209ENST00000564511 GGACTQ9BVM4 153 aa3.56□□□□□ -1.84
TUBGCP4-209ENST00000564511 FUNDC2Q9BWH2 189 aa3.56□□□□□ -1.84
TUBGCP4-209ENST00000564511 MAGT1Q9H0U3 335 aa3.56□□□□□ -1.84
TUBGCP4-209ENST00000564511 NRN1Q9NPD7 142 aa3.56□□□□□ -1.84
TUBGCP4-209ENST00000564511 TEX13DA0A0J9YY54 714 aaPredicted RBP3.55□□□□□ -1.84
TUBGCP4-209ENST00000564511 LYRM9A8MSI8 78 aa3.55□□□□□ -1.84
TUBGCP4-209ENST00000564511 HPGDSO60760 199 aa3.55□□□□□ -1.84
TUBGCP4-209ENST00000564511 SCGB2A1O75556 95 aa3.55□□□□□ -1.84
TUBGCP4-209ENST00000564511 ATG12O94817 140 aa3.55□□□□□ -1.84
TUBGCP4-209ENST00000564511 GABARAPO95166 117 aa3.55□□□□□ -1.84
TUBGCP4-209ENST00000564511 ATP5G1P05496 136 aa3.55□□□□□ -1.84
TUBGCP4-209ENST00000564511 RD3LP0DJH9 198 aa3.55□□□□□ -1.84
TUBGCP4-209ENST00000564511 S100A11P31949 105 aa3.55□□□□□ -1.84
TUBGCP4-209ENST00000564511 ETV6P41212 452 aa3.55□□□□□ -1.84
TUBGCP4-209ENST00000564511 NKX2-1P43699 371 aaPredicted RBP3.55□□□□□ -1.84
TUBGCP4-209ENST00000564511 ATP5G3P48201 142 aa3.55□□□□□ -1.84
TUBGCP4-209ENST00000564511 SUB1P53999 127 aaKnown RBP eCLIP3.55□□□□□ -1.84
TUBGCP4-209ENST00000564511 KRTAP10-1P60331 282 aa3.55□□□□□ -1.84
TUBGCP4-209ENST00000564511 HERV-K104P61576 105 aa3.55□□□□□ -1.84
TUBGCP4-209ENST00000564511 HSPE1P61604 102 aaKnown RBP3.55□□□□□ -1.84
TUBGCP4-209ENST00000564511 HAMPP81172 84 aa3.55□□□□□ -1.84
TUBGCP4-209ENST00000564511 PSG9Q00887 426 aa3.55□□□□□ -1.84
TUBGCP4-209ENST00000564511 PRCDQ00LT1 54 aa3.55□□□□□ -1.84
TUBGCP4-209ENST00000564511 FCN2Q15485 313 aa3.55□□□□□ -1.84
TUBGCP4-209ENST00000564511 TIGITQ495A1 244 aa3.55□□□□□ -1.84
TUBGCP4-209ENST00000564511 SPINK9Q5DT21 86 aa3.55□□□□□ -1.84
TUBGCP4-209ENST00000564511 H2BFWTQ7Z2G1 175 aa3.55□□□□□ -1.84
TUBGCP4-209ENST00000564511 SELENOHQ8IZQ5 122 aaKnown RBP3.55□□□□□ -1.84
TUBGCP4-209ENST00000564511 ZNF709Q8N972 641 aa3.55□□□□□ -1.84
TUBGCP4-209ENST00000564511 Q8WTZ3 238 aa3.55□□□□□ -1.84
TUBGCP4-209ENST00000564511 GLMPQ8WWB7 406 aa3.55□□□□□ -1.84
TUBGCP4-209ENST00000564511 ACOT13Q9NPJ3 140 aa3.55□□□□□ -1.84
TUBGCP4-209ENST00000564511 ZNF586Q9NXT0 402 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms