RNA–Protein interactions for RNA: ENST00000564511.1

TUBGCP4-209, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-209ENST00000564511 AEBP2Q6ZN18 517 aaPredicted RBP22.35■■□□□ 1.17
TUBGCP4-209ENST00000564511 CHIC1Q5VXU3 224 aa21.35■■□□□ 1.01
TUBGCP4-209ENST00000564511 SENP3Q9H4L4 574 aaPredicted RBP18.98■□□□□ 0.63
TUBGCP4-209ENST00000564511 PHF23Q9BUL5 403 aaPredicted RBP18.8■□□□□ 0.6
TUBGCP4-209ENST00000564511 FOXD1Q16676 465 aa17.71■□□□□ 0.43
TUBGCP4-209ENST00000564511 PLPPR3Q6T4P5 718 aa17.12■□□□□ 0.33
TUBGCP4-209ENST00000564511 PPP6R1Q9UPN7 881 aa16.72■□□□□ 0.27
TUBGCP4-209ENST00000564511 ADRA2BP18089 450 aa16.66■□□□□ 0.26
TUBGCP4-209ENST00000564511 PIAS4Q8N2W9 510 aaPredicted RBP16.55■□□□□ 0.24
TUBGCP4-209ENST00000564511 MSH5O43196 834 aa16.46■□□□□ 0.23
TUBGCP4-209ENST00000564511 POTEDQ86YR6 584 aa15.82■□□□□ 0.12
TUBGCP4-209ENST00000564511 MAPK8IP2Q13387 824 aaPredicted RBP15.27■□□□□ 0.04
TUBGCP4-209ENST00000564511 SCAF1Q9H7N4 1312 aaKnown RBP15.18■□□□□ 0.02
TUBGCP4-209ENST00000564511 DMRT2Q9Y5R5 561 aa15.1■□□□□ 0.01
TUBGCP4-209ENST00000564511 PPP4R3CPQ6ZMV5 832 aa15.05■□□□□ -0
TUBGCP4-209ENST00000564511 CNKSR2Q8WXI2 1034 aa14.71□□□□□ -0.05
TUBGCP4-209ENST00000564511 HOXD11P31277 338 aaPredicted RBP14.61□□□□□ -0.07
TUBGCP4-209ENST00000564511 RNF216Q9NWF9 866 aaPredicted RBP14.54□□□□□ -0.08
TUBGCP4-209ENST00000564511 NCBP3Q53F19 620 aaKnown RBP14.48□□□□□ -0.09
TUBGCP4-209ENST00000564511 DCAF8L1A6NGE4 600 aa14.45□□□□□ -0.1
TUBGCP4-209ENST00000564511 NPM3O75607 178 aaKnown RBP14.32□□□□□ -0.12
TUBGCP4-209ENST00000564511 KCNA4P22459 653 aa14.2□□□□□ -0.14
TUBGCP4-209ENST00000564511 RNF39Q9H2S5 420 aa14.08□□□□□ -0.16
TUBGCP4-209ENST00000564511 DNAJC5BQ9UF47 199 aa14.05□□□□□ -0.16
TUBGCP4-209ENST00000564511 CACNB1Q02641 598 aaPredicted RBP14.03□□□□□ -0.16
TUBGCP4-209ENST00000564511 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.9□□□□□ -0.18
TUBGCP4-209ENST00000564511 C1QBPQ07021 282 aaKnown RBP13.88□□□□□ -0.19
TUBGCP4-209ENST00000564511 SLC4A2P04920 1241 aa13.65□□□□□ -0.22
TUBGCP4-209ENST00000564511 U3KPZ7 1027 aaPredicted RBP13.65□□□□□ -0.22
TUBGCP4-209ENST00000564511 SLC4A1APQ9BWU0 796 aaKnown RBP13.41□□□□□ -0.26
TUBGCP4-209ENST00000564511 SPINK5Q9NQ38 1064 aaPredicted RBP13.41□□□□□ -0.26
TUBGCP4-209ENST00000564511 CAPN15O75808 1086 aa13.35□□□□□ -0.27
TUBGCP4-209ENST00000564511 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.27□□□□□ -0.29
TUBGCP4-209ENST00000564511 HNRNPUL2Q1KMD3 747 aaKnown RBP13.27□□□□□ -0.29
TUBGCP4-209ENST00000564511 DSG3P32926 999 aa13.26□□□□□ -0.29
TUBGCP4-209ENST00000564511 APLP2Q06481 763 aa13.22□□□□□ -0.29
TUBGCP4-209ENST00000564511 MYCNP04198 464 aaPredicted RBP13.21□□□□□ -0.29
TUBGCP4-209ENST00000564511 SAMD1Q6SPF0 538 aaPredicted RBP13.21□□□□□ -0.29
TUBGCP4-209ENST00000564511 TRHP20396 242 aaPredicted RBP13.19□□□□□ -0.3
TUBGCP4-209ENST00000564511 FOXD4L1Q9NU39 408 aa13.17□□□□□ -0.3
TUBGCP4-209ENST00000564511 ZNF219Q9P2Y4 722 aaPredicted RBP13.13□□□□□ -0.31
TUBGCP4-209ENST00000564511 ZBTB22O15209 634 aa13.07□□□□□ -0.32
TUBGCP4-209ENST00000564511 ABCB7O75027 752 aa13.07□□□□□ -0.32
TUBGCP4-209ENST00000564511 NISCHQ9Y2I1 1504 aa13.06□□□□□ -0.32
TUBGCP4-209ENST00000564511 ATF5Q9Y2D1 282 aaPredicted RBP12.95□□□□□ -0.34
TUBGCP4-209ENST00000564511 POLA2Q14181 598 aa12.89□□□□□ -0.35
TUBGCP4-209ENST00000564511 ATXN8OSP0DMR3 200 aa12.74□□□□□ -0.37
TUBGCP4-209ENST00000564511 CSRNP3Q8WYN3 585 aa12.63□□□□□ -0.39
TUBGCP4-209ENST00000564511 RBM42Q9BTD8 480 aaKnown RBP12.59□□□□□ -0.39
TUBGCP4-209ENST00000564511 ZBTB12Q9Y330 459 aaPredicted RBP12.58□□□□□ -0.4
TUBGCP4-209ENST00000564511 EHMT2Q96KQ7 1210 aa12.51□□□□□ -0.41
TUBGCP4-209ENST00000564511 OSCARQ8IYS5 282 aa12.45□□□□□ -0.42
TUBGCP4-209ENST00000564511 POTEHQ6S545 545 aa12.42□□□□□ -0.42
TUBGCP4-209ENST00000564511 AKT1S1Q96B36 256 aa12.37□□□□□ -0.43
TUBGCP4-209ENST00000564511 FBLN2P98095 1184 aa12.36□□□□□ -0.43
TUBGCP4-209ENST00000564511 MKRN4PQ13434 485 aaPredicted RBP12.35□□□□□ -0.43
TUBGCP4-209ENST00000564511 CHRDL2Q6WN34 429 aa12.28□□□□□ -0.44
TUBGCP4-209ENST00000564511 REM2Q8IYK8 340 aaPredicted RBP12.27□□□□□ -0.45
TUBGCP4-209ENST00000564511 SPDYE2BA6NHP3 402 aa12.24□□□□□ -0.45
TUBGCP4-209ENST00000564511 SPDYE6P0CI01 402 aa12.24□□□□□ -0.45
TUBGCP4-209ENST00000564511 SPDYE2Q495Y8 402 aa12.24□□□□□ -0.45
TUBGCP4-209ENST00000564511 ABCC9O60706 1549 aa12.15□□□□□ -0.46
TUBGCP4-209ENST00000564511 PITPNM1O00562 1244 aa12.13□□□□□ -0.47
TUBGCP4-209ENST00000564511 ZNF692Q9BU19 519 aaPredicted RBP12.13□□□□□ -0.47
TUBGCP4-209ENST00000564511 SSUH2Q9Y2M2 353 aa12.1□□□□□ -0.47
TUBGCP4-209ENST00000564511 PIP4P2Q8N4L2 257 aa12.04□□□□□ -0.48
TUBGCP4-209ENST00000564511 FXR2P51116 673 aaKnown RBP eCLIP12.01□□□□□ -0.49
TUBGCP4-209ENST00000564511 SPDYE1Q8NFV5 336 aaPredicted RBP11.98□□□□□ -0.49
TUBGCP4-209ENST00000564511 PABPN1Q86U42 306 aaKnown RBP eCLIP11.96□□□□□ -0.49
TUBGCP4-209ENST00000564511 CLEC11AQ9Y240 323 aa11.96□□□□□ -0.49
TUBGCP4-209ENST00000564511 DNAJC5Q9H3Z4 198 aa11.89□□□□□ -0.51
TUBGCP4-209ENST00000564511 SPDYE4A6NLX3 237 aa11.82□□□□□ -0.52
TUBGCP4-209ENST00000564511 PRKAR2AP13861 404 aaKnown RBP11.82□□□□□ -0.52
TUBGCP4-209ENST00000564511 PRR29P0C7W0 189 aa11.79□□□□□ -0.52
TUBGCP4-209ENST00000564511 CCDC180Q9P1Z9 1646 aa11.77□□□□□ -0.53
TUBGCP4-209ENST00000564511 HAX1O00165 279 aa11.76□□□□□ -0.53
TUBGCP4-209ENST00000564511 CHADLQ6NUI6 762 aa11.74□□□□□ -0.53
TUBGCP4-209ENST00000564511 SP7Q8TDD2 431 aaPredicted RBP11.71□□□□□ -0.53
TUBGCP4-209ENST00000564511 EVX2Q03828 476 aa11.69□□□□□ -0.54
TUBGCP4-209ENST00000564511 STAG3Q9UJ98 1225 aa11.64□□□□□ -0.55
TUBGCP4-209ENST00000564511 C19orf67A6NJJ6 358 aa11.61□□□□□ -0.55
TUBGCP4-209ENST00000564511 PROM2Q8N271 834 aa11.58□□□□□ -0.56
TUBGCP4-209ENST00000564511 FARP1Q9Y4F1 1045 aaPredicted RBP11.57□□□□□ -0.56
TUBGCP4-209ENST00000564511 CREBZFQ9NS37 354 aa11.56□□□□□ -0.56
TUBGCP4-209ENST00000564511 CD44P16070 742 aaKnown RBP11.44□□□□□ -0.58
TUBGCP4-209ENST00000564511 FKBP8Q14318 412 aa11.41□□□□□ -0.58
TUBGCP4-209ENST00000564511 GABBR2O75899 941 aa11.4□□□□□ -0.58
TUBGCP4-209ENST00000564511 MNX1P50219 401 aaPredicted RBP11.39□□□□□ -0.59
TUBGCP4-209ENST00000564511 RB1CC1Q8TDY2 1594 aa11.39□□□□□ -0.59
TUBGCP4-209ENST00000564511 ZRANB1Q9UGI0 708 aa11.32□□□□□ -0.6
TUBGCP4-209ENST00000564511 NPM1P06748 294 aaKnown RBP eCLIP11.31□□□□□ -0.6
TUBGCP4-209ENST00000564511 DCAF8L2P0C7V8 631 aa11.3□□□□□ -0.6
TUBGCP4-209ENST00000564511 MIER1Q8N108 512 aa11.27□□□□□ -0.61
TUBGCP4-209ENST00000564511 ZNF579Q8NAF0 562 aaKnown RBP11.27□□□□□ -0.61
TUBGCP4-209ENST00000564511 CLCN6P51797 869 aa11.24□□□□□ -0.61
TUBGCP4-209ENST00000564511 NACADO15069 1562 aa11.24□□□□□ -0.61
TUBGCP4-209ENST00000564511 PAK3O75914 559 aaPredicted RBP11.22□□□□□ -0.61
TUBGCP4-209ENST00000564511 PLEKHG5O94827 1062 aa11.19□□□□□ -0.62
TUBGCP4-209ENST00000564511 POTEIP0CG38 1075 aa11.19□□□□□ -0.62
TUBGCP4-209ENST00000564511 PHF12Q96QT6 1004 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms