RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 IGHV3-35A0A0C4DH35 117 aa10.95□□□□□ -0.66
LDB3-207ENST00000542786 SNURFLB1AK76 121 aa10.95□□□□□ -0.66
LDB3-207ENST00000542786 ZNF253O75346 499 aa10.95□□□□□ -0.66
LDB3-207ENST00000542786 MT-ND6P03923 174 aa10.95□□□□□ -0.66
LDB3-207ENST00000542786 GDF5OSQ5U4N7 250 aa10.95□□□□□ -0.66
LDB3-207ENST00000542786 WDR73Q6P4I2 378 aa10.95□□□□□ -0.66
LDB3-207ENST00000542786 CIARTQ8N365 385 aaPredicted RBP10.95□□□□□ -0.66
LDB3-207ENST00000542786 ARL6IP6Q8N6S5 226 aa10.95□□□□□ -0.66
LDB3-207ENST00000542786 NEU1Q99519 415 aa10.95□□□□□ -0.66
LDB3-207ENST00000542786 RPP21Q9H633 154 aaKnown RBP10.95□□□□□ -0.66
LDB3-207ENST00000542786 U3KQE9 123 aa10.95□□□□□ -0.66
LDB3-207ENST00000542786 IGHV3OR16-8A0A075B7F1 116 aa10.94□□□□□ -0.66
LDB3-207ENST00000542786 A0A1B0GXF2 115 aa10.94□□□□□ -0.66
LDB3-207ENST00000542786 SPINK4O60575 86 aa10.94□□□□□ -0.66
LDB3-207ENST00000542786 ATP5G2Q06055 141 aa10.94□□□□□ -0.66
LDB3-207ENST00000542786 LOXL1Q08397 574 aaPredicted RBP10.94□□□□□ -0.66
LDB3-207ENST00000542786 PSG3Q16557 428 aa10.94□□□□□ -0.66
LDB3-207ENST00000542786 RASL11AQ6T310 242 aa10.94□□□□□ -0.66
LDB3-207ENST00000542786 Q6ZS46 218 aa10.94□□□□□ -0.66
LDB3-207ENST00000542786 TMEM256Q8N2U0 113 aa10.94□□□□□ -0.66
LDB3-207ENST00000542786 GBGT1Q8N5D6 347 aa10.94□□□□□ -0.66
LDB3-207ENST00000542786 PACRGQ96M98 296 aaPredicted RBP10.94□□□□□ -0.66
LDB3-207ENST00000542786 LINC00527Q9UJ94 153 aa10.94□□□□□ -0.66
LDB3-207ENST00000542786 PTPN13Q12923 2485 aa10.94□□□□□ -0.66
LDB3-207ENST00000542786 A0A087X0K7 114 aa10.93□□□□□ -0.66
LDB3-207ENST00000542786 J3QLI3 93 aa10.93□□□□□ -0.66
LDB3-207ENST00000542786 M0QZK8 103 aa10.93□□□□□ -0.66
LDB3-207ENST00000542786 BUB3O43684 328 aa10.93□□□□□ -0.66
LDB3-207ENST00000542786 NUPR1O60356 82 aa10.93□□□□□ -0.66
LDB3-207ENST00000542786 FSHBP01225 129 aa10.93□□□□□ -0.66
LDB3-207ENST00000542786 CDPF1Q6NVV7 123 aa10.93□□□□□ -0.66
LDB3-207ENST00000542786 MRPL54Q6P161 138 aaKnown RBP10.93□□□□□ -0.66
LDB3-207ENST00000542786 PRNTQ86SH4 94 aa10.93□□□□□ -0.66
LDB3-207ENST00000542786 GTSF1Q8WW33 167 aa10.93□□□□□ -0.66
LDB3-207ENST00000542786 ZC2HC1AQ96GY0 325 aa10.93□□□□□ -0.66
LDB3-207ENST00000542786 NIT2Q9NQR4 276 aa10.93□□□□□ -0.66
LDB3-207ENST00000542786 NAT8BQ9UHF3 227 aa10.93□□□□□ -0.66
LDB3-207ENST00000542786 PSG8Q9UQ74 426 aa10.93□□□□□ -0.66
LDB3-207ENST00000542786 CELSR2Q9HCU4 2923 aa10.93□□□□□ -0.66
LDB3-207ENST00000542786 COL8A1P27658 744 aa10.93□□□□□ -0.66
LDB3-207ENST00000542786 BLCAPP62952 87 aa10.93□□□□□ -0.66
LDB3-207ENST00000542786 PSG9Q00887 426 aa10.93□□□□□ -0.66
LDB3-207ENST00000542786 CFHR3Q02985 330 aa10.93□□□□□ -0.66
LDB3-207ENST00000542786 DNLZQ5SXM8 178 aa10.93□□□□□ -0.66
LDB3-207ENST00000542786 NOL4LQ96MY1 436 aaPredicted RBP10.93□□□□□ -0.66
LDB3-207ENST00000542786 ZFP30Q9Y2G7 519 aa10.93□□□□□ -0.66
LDB3-207ENST00000542786 POLQO75417 2590 aa10.93□□□□□ -0.66
LDB3-207ENST00000542786 GRIFINA4D1Z8 144 aa10.92□□□□□ -0.66
LDB3-207ENST00000542786 PCP4L1A6NKN8 68 aa10.92□□□□□ -0.66
LDB3-207ENST00000542786 HIGD1CA8MV81 97 aa10.92□□□□□ -0.66
LDB3-207ENST00000542786 H3BUA1 57 aa10.92□□□□□ -0.66
LDB3-207ENST00000542786 HLA-DQA1P01909 254 aa10.92□□□□□ -0.66
LDB3-207ENST00000542786 PRB4P10163 310 aaPredicted RBP10.92□□□□□ -0.66
LDB3-207ENST00000542786 COX8CQ7Z4L0 72 aa10.92□□□□□ -0.66
LDB3-207ENST00000542786 BEX4Q9NWD9 120 aaPredicted RBP10.92□□□□□ -0.66
LDB3-207ENST00000542786 ZNF580Q9UK33 172 aa10.92□□□□□ -0.66
LDB3-207ENST00000542786 CSMD1Q96PZ7 3565 aa10.92□□□□□ -0.66
LDB3-207ENST00000542786 ANKRD17O75179 2603 aaKnown RBP10.92□□□□□ -0.66
LDB3-207ENST00000542786 SERTM2A0A1B0GWG4 89 aa10.91□□□□□ -0.66
LDB3-207ENST00000542786 P01737 135 aa10.91□□□□□ -0.66
LDB3-207ENST00000542786 ESDP10768 282 aa10.91□□□□□ -0.66
LDB3-207ENST00000542786 CRIP1P50238 77 aa10.91□□□□□ -0.66
LDB3-207ENST00000542786 RPL19P84098 196 aaKnown RBP10.91□□□□□ -0.66
LDB3-207ENST00000542786 Q0VG73 95 aa10.91□□□□□ -0.66
LDB3-207ENST00000542786 C9orf152Q5JTZ5 239 aa10.91□□□□□ -0.66
LDB3-207ENST00000542786 OR4B1Q8NGF8 309 aa10.91□□□□□ -0.66
LDB3-207ENST00000542786 GFRA4Q9GZZ7 299 aa10.91□□□□□ -0.66
LDB3-207ENST00000542786 AAMDCQ9H7C9 122 aa10.91□□□□□ -0.66
LDB3-207ENST00000542786 ZNF331Q9NQX6 463 aaPredicted RBP10.91□□□□□ -0.66
LDB3-207ENST00000542786 USP9YO00507 2555 aaPredicted RBP10.91□□□□□ -0.66
LDB3-207ENST00000542786 CRYBG3Q68DQ2 2970 aa10.91□□□□□ -0.66
LDB3-207ENST00000542786 SVEP1Q4LDE5 3571 aa10.91□□□□□ -0.66
LDB3-207ENST00000542786 IGLV1-40P01703 118 aa10.91□□□□□ -0.66
LDB3-207ENST00000542786 APOHP02749 345 aaPredicted RBP10.91□□□□□ -0.66
LDB3-207ENST00000542786 TRGV3P03979 118 aa10.91□□□□□ -0.66
LDB3-207ENST00000542786 IGHV4-31P0DP07 118 aa10.91□□□□□ -0.66
LDB3-207ENST00000542786 S100A7P31151 101 aa10.91□□□□□ -0.66
LDB3-207ENST00000542786 RAB9AP51151 201 aa10.91□□□□□ -0.66
LDB3-207ENST00000542786 S100A12P80511 92 aa10.91□□□□□ -0.66
LDB3-207ENST00000542786 DEFB112Q30KQ8 113 aa10.91□□□□□ -0.66
LDB3-207ENST00000542786 C1orf194Q5T5A4 169 aa10.91□□□□□ -0.66
LDB3-207ENST00000542786 TCF24Q7RTU0 167 aa10.91□□□□□ -0.66
LDB3-207ENST00000542786 ATP5L2Q7Z4Y8 100 aa10.91□□□□□ -0.66
LDB3-207ENST00000542786 KRTAP1-3Q8IUG1 177 aa10.91□□□□□ -0.66
LDB3-207ENST00000542786 LRRC75A-AS1Q8N1F1 130 aa10.91□□□□□ -0.66
LDB3-207ENST00000542786 MAPK1IP1LQ8NDC0 245 aa10.91□□□□□ -0.66
LDB3-207ENST00000542786 ASCL2Q99929 193 aa10.91□□□□□ -0.66
LDB3-207ENST00000542786 GNB4Q9HAV0 340 aa10.91□□□□□ -0.66
LDB3-207ENST00000542786 FAM231BA6NCW3 169 aa10.9□□□□□ -0.66
LDB3-207ENST00000542786 A8MWL6 223 aa10.9□□□□□ -0.66
LDB3-207ENST00000542786 F2Z2F3 143 aa10.9□□□□□ -0.66
LDB3-207ENST00000542786 K7EQM0 130 aa10.9□□□□□ -0.66
LDB3-207ENST00000542786 CRISP2P16562 243 aa10.9□□□□□ -0.66
LDB3-207ENST00000542786 RELQ04864 619 aaPredicted RBP10.9□□□□□ -0.66
LDB3-207ENST00000542786 DEFB113Q30KQ7 82 aa10.9□□□□□ -0.66
LDB3-207ENST00000542786 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.9□□□□□ -0.66
LDB3-207ENST00000542786 GSN-AS1Q9NRJ2 163 aa10.9□□□□□ -0.66
LDB3-207ENST00000542786 CHD6Q8TD26 2715 aa10.9□□□□□ -0.66
LDB3-207ENST00000542786 CR1P17927 2039 aa10.9□□□□□ -0.67
LDB3-207ENST00000542786 IGKV2-40A0A087WW87 121 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms