RNA–Protein interactions for RNA: ENST00000532347.1

KNL1-209, Transcript of kinetochore scaffold 1, human

TSL 4

Gene KNL1, Length 564 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KNL1-209	ENST00000532347	HSPA13	P48723	471 aa		4.93	□□□□□ -1.62
KNL1-209	ENST00000532347	SNRPD3	P62318	126 aa	Known RBP	4.93	□□□□□ -1.62
KNL1-209	ENST00000532347	RPS25	P62851	125 aa	Known RBP	4.93	□□□□□ -1.62
KNL1-209	ENST00000532347	INSL4	Q14641	139 aa		4.93	□□□□□ -1.62
KNL1-209	ENST00000532347	TMEM91	Q6ZNR0	172 aa		4.93	□□□□□ -1.62
KNL1-209	ENST00000532347	C19orf35	Q6ZS72	473 aa		4.93	□□□□□ -1.62
KNL1-209	ENST00000532347	TPRA1	Q86W33	373 aa		4.93	□□□□□ -1.62
KNL1-209	ENST00000532347	C6orf223	Q8N319	242 aa		4.93	□□□□□ -1.62
KNL1-209	ENST00000532347	STXBP6	Q8NFX7	210 aa		4.93	□□□□□ -1.62
KNL1-209	ENST00000532347	DCANP1	Q8TF63	244 aa		4.93	□□□□□ -1.62
KNL1-209	ENST00000532347	SCN3B	Q9NY72	215 aa		4.93	□□□□□ -1.62
KNL1-209	ENST00000532347	AK6	Q9Y3D8	172 aa	Known RBP	4.93	□□□□□ -1.62
KNL1-209	ENST00000532347	RFNG	Q9Y644	331 aa		4.93	□□□□□ -1.62
KNL1-209	ENST00000532347	IGKV1D-8	A0A087WSZ0	117 aa		4.92	□□□□□ -1.62
KNL1-209	ENST00000532347	KRTAP9-6	A8MVA2	160 aa		4.92	□□□□□ -1.62
KNL1-209	ENST00000532347	DEFB4A	O15263	64 aa		4.92	□□□□□ -1.62
KNL1-209	ENST00000532347	GSTZ1	O43708	216 aa	Predicted RBP	4.92	□□□□□ -1.62
KNL1-209	ENST00000532347	YIF1A	O95070	293 aa		4.92	□□□□□ -1.62
KNL1-209	ENST00000532347	MYL9	P24844	172 aa		4.92	□□□□□ -1.62
KNL1-209	ENST00000532347	CALR	P27797	417 aa	Known RBP	4.92	□□□□□ -1.62
KNL1-209	ENST00000532347	S100G	P29377	79 aa		4.92	□□□□□ -1.62
KNL1-209	ENST00000532347	RPL5	P46777	297 aa	Known RBP	4.92	□□□□□ -1.62
KNL1-209	ENST00000532347	GNG2	P59768	71 aa		4.92	□□□□□ -1.62
KNL1-209	ENST00000532347	B2M	P61769	119 aa		4.92	□□□□□ -1.62
KNL1-209	ENST00000532347	ERH	P84090	104 aa	Known RBP	4.92	□□□□□ -1.62
KNL1-209	ENST00000532347	UBE2U	Q5VVX9	321 aa		4.92	□□□□□ -1.62
KNL1-209	ENST00000532347	TOMM20L	Q6UXN7	152 aa		4.92	□□□□□ -1.62
KNL1-209	ENST00000532347	CMTM1	Q8IZ96	169 aa		4.92	□□□□□ -1.62
KNL1-209	ENST00000532347	METTL26	Q96S19	204 aa		4.92	□□□□□ -1.62
KNL1-209	ENST00000532347	NIPSNAP3B	Q9BS92	247 aa		4.92	□□□□□ -1.62
KNL1-209	ENST00000532347	OR51B2	Q9Y5P1	312 aa		4.92	□□□□□ -1.62
KNL1-209	ENST00000532347	LRP1B	Q9NZR2	4599 aa		4.91	□□□□□ -1.62
KNL1-209	ENST00000532347	NBDY	A0A0U1RRE5	68 aa		4.91	□□□□□ -1.62
KNL1-209	ENST00000532347		M0R2N4	97 aa		4.91	□□□□□ -1.62
KNL1-209	ENST00000532347	HLA-DRB4	P13762	266 aa		4.91	□□□□□ -1.62
KNL1-209	ENST00000532347	RAB3B	P20337	219 aa		4.91	□□□□□ -1.62
KNL1-209	ENST00000532347	TFPI2	P48307	235 aa		4.91	□□□□□ -1.62
KNL1-209	ENST00000532347	SUB1	P53999	127 aa	Known RBP eCLIP	4.91	□□□□□ -1.62
KNL1-209	ENST00000532347	PRCD	Q00LT1	54 aa		4.91	□□□□□ -1.62
KNL1-209	ENST00000532347	CDNF	Q49AH0	187 aa		4.91	□□□□□ -1.62
KNL1-209	ENST00000532347	LAIR2	Q6ISS4	152 aa		4.91	□□□□□ -1.62
KNL1-209	ENST00000532347	LPCAT3	Q6P1A2	487 aa		4.91	□□□□□ -1.62
KNL1-209	ENST00000532347	KCNIP4	Q6PIL6	250 aa		4.91	□□□□□ -1.62
KNL1-209	ENST00000532347	MTURN	Q8N3F0	131 aa		4.91	□□□□□ -1.62
KNL1-209	ENST00000532347	UBAC2	Q8NBM4	344 aa		4.91	□□□□□ -1.62
KNL1-209	ENST00000532347	OR10W1	Q8NGF6	305 aa		4.91	□□□□□ -1.62
KNL1-209	ENST00000532347	VCX	Q9H320	206 aa		4.91	□□□□□ -1.62
KNL1-209	ENST00000532347	DUSP21	Q9H596	190 aa		4.91	□□□□□ -1.62
KNL1-209	ENST00000532347	CACFD1	Q9UGQ2	172 aa		4.91	□□□□□ -1.62
KNL1-209	ENST00000532347	BLOC1S6	Q9UL45	172 aa		4.91	□□□□□ -1.62
KNL1-209	ENST00000532347	TPRKB	Q9Y3C4	175 aa		4.91	□□□□□ -1.62
KNL1-209	ENST00000532347	HLA-DRB4	X5D2U9	266 aa		4.91	□□□□□ -1.62
KNL1-209	ENST00000532347	NACA	E9PAV3	2078 aa		4.91	□□□□□ -1.62
KNL1-209	ENST00000532347		H3BMM0	161 aa		4.9	□□□□□ -1.63
KNL1-209	ENST00000532347	MT-CO2	P00403	227 aa		4.9	□□□□□ -1.63
KNL1-209	ENST00000532347	IGHV3-48	P01763	117 aa		4.9	□□□□□ -1.63
KNL1-209	ENST00000532347	PSMB9	P28065	219 aa		4.9	□□□□□ -1.63
KNL1-209	ENST00000532347	TSPO	P30536	169 aa		4.9	□□□□□ -1.63
KNL1-209	ENST00000532347	P2RY1	P47900	373 aa		4.9	□□□□□ -1.63
KNL1-209	ENST00000532347	CCL18	P55774	89 aa		4.9	□□□□□ -1.63
KNL1-209	ENST00000532347	CLDN12	P56749	244 aa		4.9	□□□□□ -1.63
KNL1-209	ENST00000532347	AADACL3	Q5VUY0	350 aa		4.9	□□□□□ -1.63
KNL1-209	ENST00000532347	BPIFB6	Q8NFQ5	453 aa		4.9	□□□□□ -1.63
KNL1-209	ENST00000532347	OR4X1	Q8NH49	305 aa		4.9	□□□□□ -1.63
KNL1-209	ENST00000532347	MAFIP	Q8WZ33	124 aa		4.9	□□□□□ -1.63
KNL1-209	ENST00000532347	SLC25A46	Q96AG3	418 aa		4.9	□□□□□ -1.63
KNL1-209	ENST00000532347	ATG5	Q9H1Y0	275 aa		4.9	□□□□□ -1.63
KNL1-209	ENST00000532347	CCL28	Q9NRJ3	127 aa		4.9	□□□□□ -1.63
KNL1-209	ENST00000532347	RABAC1	Q9UI14	185 aa		4.9	□□□□□ -1.63
KNL1-209	ENST00000532347	TRAV3	A0A0B4J244	114 aa		4.89	□□□□□ -1.63
KNL1-209	ENST00000532347	TRDV1	A0A1B0GX56	115 aa		4.89	□□□□□ -1.63
KNL1-209	ENST00000532347	LYRM9	A8MSI8	78 aa		4.89	□□□□□ -1.63
KNL1-209	ENST00000532347	SULT1C2	O00338	296 aa		4.89	□□□□□ -1.63
KNL1-209	ENST00000532347	ZNF207	O43670	478 aa	Known RBP	4.89	□□□□□ -1.63
KNL1-209	ENST00000532347	ATG12	O94817	140 aa		4.89	□□□□□ -1.63
KNL1-209	ENST00000532347	TMEM50A	O95807	157 aa		4.89	□□□□□ -1.63
KNL1-209	ENST00000532347	HSMCR30	P0CW71	290 aa		4.89	□□□□□ -1.63
KNL1-209	ENST00000532347	ELK1	P19419	428 aa		4.89	□□□□□ -1.63
KNL1-209	ENST00000532347	YPEL3	P61236	119 aa	Predicted RBP	4.89	□□□□□ -1.63
KNL1-209	ENST00000532347	HSPE1	P61604	102 aa	Known RBP	4.89	□□□□□ -1.63
KNL1-209	ENST00000532347	FABP5	Q01469	135 aa		4.89	□□□□□ -1.63
KNL1-209	ENST00000532347	ACTL10	Q5JWF8	245 aa		4.89	□□□□□ -1.63
KNL1-209	ENST00000532347	HES5	Q5TA89	166 aa		4.89	□□□□□ -1.63
KNL1-209	ENST00000532347	ZNRF2	Q8NHG8	242 aa		4.89	□□□□□ -1.63
KNL1-209	ENST00000532347	TMEM203	Q969S6	136 aa		4.89	□□□□□ -1.63
KNL1-209	ENST00000532347	MGLL	Q99685	303 aa		4.89	□□□□□ -1.63
KNL1-209	ENST00000532347	UPK3B	Q9BT76	320 aa		4.89	□□□□□ -1.63
KNL1-209	ENST00000532347	DIABLO	Q9NR28	239 aa		4.89	□□□□□ -1.63
KNL1-209	ENST00000532347	NDUFB11	Q9NX14	153 aa		4.89	□□□□□ -1.63
KNL1-209	ENST00000532347	APOB	P04114	4563 aa	Known RBP	4.89	□□□□□ -1.63
KNL1-209	ENST00000532347	IGLV2-18	A0A075B6J9	118 aa		4.88	□□□□□ -1.63
KNL1-209	ENST00000532347		A0A075B6Q4	140 aa		4.88	□□□□□ -1.63
KNL1-209	ENST00000532347	TMEM235	A6NFC5	223 aa		4.88	□□□□□ -1.63
KNL1-209	ENST00000532347	RS1	O15537	224 aa		4.88	□□□□□ -1.63
KNL1-209	ENST00000532347	PGLYRP1	O75594	196 aa	Predicted RBP	4.88	□□□□□ -1.63
KNL1-209	ENST00000532347	HBE1	P02100	147 aa		4.88	□□□□□ -1.63
KNL1-209	ENST00000532347	ZNF688	P0C7X2	276 aa		4.88	□□□□□ -1.63
KNL1-209	ENST00000532347	SLC25A4	P12235	298 aa		4.88	□□□□□ -1.63
KNL1-209	ENST00000532347	SNCA	P37840	140 aa		4.88	□□□□□ -1.63
KNL1-209	ENST00000532347	PPT1	P50897	306 aa		4.88	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms