RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 OR5AL1P0C617 328 aa7.57□□□□□ -1.2
NPHP3-209ENST00000493732 KLF17Q5JT82 389 aaPredicted RBP7.57□□□□□ -1.2
NPHP3-209ENST00000493732 UNQ6494/PRO21346Q6UXR6 183 aa7.57□□□□□ -1.2
NPHP3-209ENST00000493732 Q8N9W7 124 aa7.57□□□□□ -1.2
NPHP3-209ENST00000493732 ATP6V0BQ99437 205 aa7.57□□□□□ -1.2
NPHP3-209ENST00000493732 DMXL2Q8TDJ6 3036 aa7.57□□□□□ -1.2
NPHP3-209ENST00000493732 TRAV8-1A0A0A6YYK1 113 aa7.56□□□□□ -1.2
NPHP3-209ENST00000493732 VWC2LB2RUY7 222 aa7.56□□□□□ -1.2
NPHP3-209ENST00000493732 NTF3P20783 257 aa7.56□□□□□ -1.2
NPHP3-209ENST00000493732 ZNF124Q15973 351 aa7.56□□□□□ -1.2
NPHP3-209ENST00000493732 COX8CQ7Z4L0 72 aa7.56□□□□□ -1.2
NPHP3-209ENST00000493732 NIT1Q86X76 327 aa7.56□□□□□ -1.2
NPHP3-209ENST00000493732 DYNAPQ8N1N2 210 aa7.56□□□□□ -1.2
NPHP3-209ENST00000493732 GATD1Q8NB37 220 aa7.56□□□□□ -1.2
NPHP3-209ENST00000493732 LAMA5O15230 3695 aa7.56□□□□□ -1.2
NPHP3-209ENST00000493732 LOC102724200A0A096LPH7 203 aaPredicted RBP7.56□□□□□ -1.2
NPHP3-209ENST00000493732 F8W735 103 aaPredicted RBP7.56□□□□□ -1.2
NPHP3-209ENST00000493732 CTSGP08311 255 aa7.56□□□□□ -1.2
NPHP3-209ENST00000493732 C3orf79P0CE67 100 aa7.56□□□□□ -1.2
NPHP3-209ENST00000493732 RPS20P60866 119 aaKnown RBP7.56□□□□□ -1.2
NPHP3-209ENST00000493732 NDPQ00604 133 aa7.56□□□□□ -1.2
NPHP3-209ENST00000493732 TMEM95Q3KNT9 176 aa7.56□□□□□ -1.2
NPHP3-209ENST00000493732 RNASEKQ6P5S7 137 aaKnown RBP7.56□□□□□ -1.2
NPHP3-209ENST00000493732 ZNF705AQ6ZN79 300 aaPredicted RBP7.56□□□□□ -1.2
NPHP3-209ENST00000493732 ITLN2Q8WWU7 325 aaPredicted RBP7.56□□□□□ -1.2
NPHP3-209ENST00000493732 TMUB1Q9BVT8 246 aa7.56□□□□□ -1.2
NPHP3-209ENST00000493732 SSBP4Q9BWG4 385 aaPredicted RBP7.56□□□□□ -1.2
NPHP3-209ENST00000493732 ADGRG4Q8IZF6 3080 aa7.55□□□□□ -1.2
NPHP3-209ENST00000493732 SH2D7A6NKC9 451 aaPredicted RBP7.55□□□□□ -1.2
NPHP3-209ENST00000493732 EGR2P11161 476 aaPredicted RBP7.55□□□□□ -1.2
NPHP3-209ENST00000493732 CD33P20138 364 aa7.55□□□□□ -1.2
NPHP3-209ENST00000493732 BMI1P35226 326 aa7.55□□□□□ -1.2
NPHP3-209ENST00000493732 LMO4P61968 165 aa7.55□□□□□ -1.2
NPHP3-209ENST00000493732 UNQ5815/PRO19632Q6UWF5 114 aa7.55□□□□□ -1.2
NPHP3-209ENST00000493732 ZC2HC1AQ96GY0 325 aa7.55□□□□□ -1.2
NPHP3-209ENST00000493732 PAM16Q9Y3D7 125 aa7.55□□□□□ -1.2
NPHP3-209ENST00000493732 FAM181BA6NEQ2 426 aa7.54□□□□□ -1.2
NPHP3-209ENST00000493732 OR2T8A6NH00 312 aa7.54□□□□□ -1.2
NPHP3-209ENST00000493732 OVOL3O00110 214 aa7.54□□□□□ -1.2
NPHP3-209ENST00000493732 NPFFO15130 113 aa7.54□□□□□ -1.2
NPHP3-209ENST00000493732 SAA4P35542 130 aa7.54□□□□□ -1.2
NPHP3-209ENST00000493732 LY6DQ14210 128 aa7.54□□□□□ -1.2
NPHP3-209ENST00000493732 FAM19A2Q8N3H0 131 aa7.54□□□□□ -1.2
NPHP3-209ENST00000493732 Q8N976 141 aa7.54□□□□□ -1.2
NPHP3-209ENST00000493732 ZNF502Q8TBZ5 544 aa7.54□□□□□ -1.2
NPHP3-209ENST00000493732 C17orf77Q96MU5 243 aa7.54□□□□□ -1.2
NPHP3-209ENST00000493732 UQCR10Q9UDW1 63 aa7.54□□□□□ -1.2
NPHP3-209ENST00000493732 TRBV7-1A0A0A6YYK4 115 aa7.54□□□□□ -1.2
NPHP3-209ENST00000493732 A0A1B0GV90 55 aa7.54□□□□□ -1.2
NPHP3-209ENST00000493732 A0A1W2PPR1 153 aa7.54□□□□□ -1.2
NPHP3-209ENST00000493732 APOHP02749 345 aaPredicted RBP7.54□□□□□ -1.2
NPHP3-209ENST00000493732 LINC00614P0C842 121 aa7.54□□□□□ -1.2
NPHP3-209ENST00000493732 SRSF2Q01130 221 aaKnown RBP7.54□□□□□ -1.2
NPHP3-209ENST00000493732 EEF1AKMT3Q96AZ1 226 aa7.54□□□□□ -1.2
NPHP3-209ENST00000493732 TMEM70Q9BUB7 260 aa7.54□□□□□ -1.2
NPHP3-209ENST00000493732 BPESC1Q9GZL8 116 aa7.54□□□□□ -1.2
NPHP3-209ENST00000493732 A0A087X0K7 114 aa7.53□□□□□ -1.2
NPHP3-209ENST00000493732 CENPVL3A0A0U1RRI6 287 aa7.53□□□□□ -1.2
NPHP3-209ENST00000493732 TMEM189A5PLL7 270 aa7.53□□□□□ -1.2
NPHP3-209ENST00000493732 NDUFS8O00217 210 aa7.53□□□□□ -1.2
NPHP3-209ENST00000493732 NDUFS7O75251 213 aa7.53□□□□□ -1.2
NPHP3-209ENST00000493732 C15orf32Q32M92 178 aa7.53□□□□□ -1.2
NPHP3-209ENST00000493732 SPATA45Q537H7 98 aa7.53□□□□□ -1.2
NPHP3-209ENST00000493732 SLC50A1Q9BRV3 221 aa7.53□□□□□ -1.2
NPHP3-209ENST00000493732 SNHG12Q9BXW3 62 aa7.53□□□□□ -1.2
NPHP3-209ENST00000493732 CLEC5AQ9NY25 188 aa7.53□□□□□ -1.2
NPHP3-209ENST00000493732 S4R3C0 116 aa7.53□□□□□ -1.2
NPHP3-209ENST00000493732 RBAKDNA6NC62 111 aa7.52□□□□□ -1.2
NPHP3-209ENST00000493732 M0R3E3 92 aa7.52□□□□□ -1.2
NPHP3-209ENST00000493732 CRXO43186 299 aaPredicted RBP7.52□□□□□ -1.2
NPHP3-209ENST00000493732 CTRLP40313 264 aa7.52□□□□□ -1.2
NPHP3-209ENST00000493732 NUTF2P61970 127 aaKnown RBP7.52□□□□□ -1.2
NPHP3-209ENST00000493732 RHOGP84095 191 aa7.52□□□□□ -1.2
NPHP3-209ENST00000493732 ZNF493Q6ZR52 646 aa7.52□□□□□ -1.2
NPHP3-209ENST00000493732 TRAV9-2A0A087WT02 112 aa7.52□□□□□ -1.21
NPHP3-209ENST00000493732 ATP6V0E1O15342 81 aa7.52□□□□□ -1.21
NPHP3-209ENST00000493732 LEPROTL1O95214 131 aa7.52□□□□□ -1.21
NPHP3-209ENST00000493732 ECSCRQ19T08 205 aa7.52□□□□□ -1.21
NPHP3-209ENST00000493732 TDRG1Q3Y452 100 aa7.52□□□□□ -1.21
NPHP3-209ENST00000493732 AJUBAQ96IF1 538 aa7.52□□□□□ -1.21
NPHP3-209ENST00000493732 PRR25Q96S07 402 aa7.52□□□□□ -1.21
NPHP3-209ENST00000493732 PIMREGQ9BSJ6 248 aa7.52□□□□□ -1.21
NPHP3-209ENST00000493732 HSPB8Q9UJY1 196 aa7.52□□□□□ -1.21
NPHP3-209ENST00000493732 ABCA1O95477 2261 aa7.52□□□□□ -1.21
NPHP3-209ENST00000493732 IGF2RP11717 2491 aa7.52□□□□□ -1.21
NPHP3-209ENST00000493732 C2orf70A6NJV1 201 aa7.51□□□□□ -1.21
NPHP3-209ENST00000493732 FAM223BA6NKX1 122 aa7.51□□□□□ -1.21
NPHP3-209ENST00000493732 ZNF785A8K8V0 405 aa7.51□□□□□ -1.21
NPHP3-209ENST00000493732 CLEC3BP05452 202 aa7.51□□□□□ -1.21
NPHP3-209ENST00000493732 GPR183P32249 361 aa7.51□□□□□ -1.21
NPHP3-209ENST00000493732 CRIP1P50238 77 aa7.51□□□□□ -1.21
NPHP3-209ENST00000493732 PAX8Q06710 450 aa7.51□□□□□ -1.21
NPHP3-209ENST00000493732 FBLN7Q53RD9 439 aa7.51□□□□□ -1.21
NPHP3-209ENST00000493732 FAM120AOSQ5T036 256 aa7.51□□□□□ -1.21
NPHP3-209ENST00000493732 FAM223AQ8IWN6 122 aa7.51□□□□□ -1.21
NPHP3-209ENST00000493732 MRPL53Q96EL3 112 aaKnown RBP7.51□□□□□ -1.21
NPHP3-209ENST00000493732 HIF1ANQ9NWT6 349 aa7.51□□□□□ -1.21
NPHP3-209ENST00000493732 MOB4Q9Y3A3 225 aa7.51□□□□□ -1.21
NPHP3-209ENST00000493732 RNF114Q9Y508 228 aa7.51□□□□□ -1.21
NPHP3-209ENST00000493732 TMEM8BA6NDV4 472 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms