RNA–Protein interactions for RNA: ENST00000488536.1

UBA7-208, Transcript of ubiquitin like modifier activating enzyme 7, human

TSL 2

Gene UBA7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA7-208	ENST00000488536	CT45A10	P0DMU9	189 aa		10.9	□□□□□ -0.66
UBA7-208	ENST00000488536	COL8A1	P27658	744 aa		10.9	□□□□□ -0.66
UBA7-208	ENST00000488536	FAM162B	Q5T6X4	162 aa		10.9	□□□□□ -0.66
UBA7-208	ENST00000488536	DMRTA1	Q5VZB9	504 aa		10.9	□□□□□ -0.66
UBA7-208	ENST00000488536	PRR27	Q6MZM9	219 aa		10.9	□□□□□ -0.66
UBA7-208	ENST00000488536	RBPMS2	Q6ZRY4	209 aa	Known RBP	10.9	□□□□□ -0.66
UBA7-208	ENST00000488536	NUP35	Q8NFH5	326 aa		10.9	□□□□□ -0.66
UBA7-208	ENST00000488536	NEU1	Q99519	415 aa		10.9	□□□□□ -0.66
UBA7-208	ENST00000488536		S4R3C0	116 aa		10.9	□□□□□ -0.66
UBA7-208	ENST00000488536	CFAP46	Q8IYW2	2715 aa		10.9	□□□□□ -0.66
UBA7-208	ENST00000488536	LRBA	P50851	2863 aa		10.9	□□□□□ -0.67
UBA7-208	ENST00000488536	HIGD1C	A8MV81	97 aa		10.89	□□□□□ -0.67
UBA7-208	ENST00000488536		H3BTX0	84 aa		10.89	□□□□□ -0.67
UBA7-208	ENST00000488536	APCS	P02743	223 aa		10.89	□□□□□ -0.67
UBA7-208	ENST00000488536	PRB1	P04280	392 aa		10.89	□□□□□ -0.67
UBA7-208	ENST00000488536	JOSD1	Q15040	202 aa	Predicted RBP	10.89	□□□□□ -0.67
UBA7-208	ENST00000488536	PYY3	Q5JQD4	70 aa		10.89	□□□□□ -0.67
UBA7-208	ENST00000488536	PRSS57	Q6UWY2	283 aa		10.89	□□□□□ -0.67
UBA7-208	ENST00000488536	CLEC19A	Q6UXS0	136 aa		10.89	□□□□□ -0.67
UBA7-208	ENST00000488536	C9orf139	Q6ZV77	190 aa		10.89	□□□□□ -0.67
UBA7-208	ENST00000488536	PRNT	Q86SH4	94 aa		10.89	□□□□□ -0.67
UBA7-208	ENST00000488536	TMEM219	Q86XT9	240 aa		10.89	□□□□□ -0.67
UBA7-208	ENST00000488536	TEX29	Q8N6K0	151 aa		10.89	□□□□□ -0.67
UBA7-208	ENST00000488536		U3KQE9	123 aa		10.89	□□□□□ -0.67
UBA7-208	ENST00000488536	IGHV3OR16-10	A0A075B7F0	116 aa		10.88	□□□□□ -0.67
UBA7-208	ENST00000488536		A0A1B0GXF2	115 aa		10.88	□□□□□ -0.67
UBA7-208	ENST00000488536	NDUFA4	O00483	81 aa		10.88	□□□□□ -0.67
UBA7-208	ENST00000488536	IGHV3-23	P01764	117 aa		10.88	□□□□□ -0.67
UBA7-208	ENST00000488536	TRGV3	P03979	118 aa		10.88	□□□□□ -0.67
UBA7-208	ENST00000488536	PPIF	P30405	207 aa	Known RBP	10.88	□□□□□ -0.67
UBA7-208	ENST00000488536	TCL1A	P56279	114 aa		10.88	□□□□□ -0.67
UBA7-208	ENST00000488536	TPPP2	P59282	170 aa		10.88	□□□□□ -0.67
UBA7-208	ENST00000488536	RPS20	P60866	119 aa	Known RBP	10.88	□□□□□ -0.67
UBA7-208	ENST00000488536	HBB	P68871	147 aa		10.88	□□□□□ -0.67
UBA7-208	ENST00000488536	SRSF2	Q01130	221 aa	Known RBP	10.88	□□□□□ -0.67
UBA7-208	ENST00000488536	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	10.87	□□□□□ -0.67
UBA7-208	ENST00000488536	LINC01548	A6NM66	108 aa		10.87	□□□□□ -0.67
UBA7-208	ENST00000488536	SNRPC	P09234	159 aa	Known RBP	10.87	□□□□□ -0.67
UBA7-208	ENST00000488536	BMI1	P35226	326 aa		10.87	□□□□□ -0.67
UBA7-208	ENST00000488536	RAB4B	P61018	213 aa		10.87	□□□□□ -0.67
UBA7-208	ENST00000488536	SRSF1	Q07955	248 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
UBA7-208	ENST00000488536	PDZD11	Q5EBL8	140 aa		10.87	□□□□□ -0.67
UBA7-208	ENST00000488536	MRPL54	Q6P161	138 aa	Known RBP	10.87	□□□□□ -0.67
UBA7-208	ENST00000488536	C17orf77	Q96MU5	243 aa		10.87	□□□□□ -0.67
UBA7-208	ENST00000488536	NDFIP1	Q9BT67	221 aa		10.87	□□□□□ -0.67
UBA7-208	ENST00000488536	GNB4	Q9HAV0	340 aa		10.87	□□□□□ -0.67
UBA7-208	ENST00000488536	WNK2	Q9Y3S1	2297 aa		10.86	□□□□□ -0.67
UBA7-208	ENST00000488536	ZNF785	A8K8V0	405 aa		10.86	□□□□□ -0.67
UBA7-208	ENST00000488536	IGLV1-40	P01703	118 aa		10.86	□□□□□ -0.67
UBA7-208	ENST00000488536	ARL3	P36405	182 aa		10.86	□□□□□ -0.67
UBA7-208	ENST00000488536	KLF5	Q13887	457 aa	Predicted RBP	10.86	□□□□□ -0.67
UBA7-208	ENST00000488536	DEFB113	Q30KQ7	82 aa		10.86	□□□□□ -0.67
UBA7-208	ENST00000488536	C9orf152	Q5JTZ5	239 aa		10.86	□□□□□ -0.67
UBA7-208	ENST00000488536	BAGE3	Q86Y29	109 aa		10.86	□□□□□ -0.67
UBA7-208	ENST00000488536	SMAD5-AS1	Q9Y6J3	95 aa		10.86	□□□□□ -0.67
UBA7-208	ENST00000488536	SMG1	Q96Q15	3661 aa	Known RBP	10.85	□□□□□ -0.67
UBA7-208	ENST00000488536	USP24	Q9UPU5	2620 aa		10.85	□□□□□ -0.67
UBA7-208	ENST00000488536		A0A1W2PS18	150 aa		10.85	□□□□□ -0.67
UBA7-208	ENST00000488536	CLPSL1	A2RUU4	121 aa		10.85	□□□□□ -0.67
UBA7-208	ENST00000488536		A8MWP6	167 aa		10.85	□□□□□ -0.67
UBA7-208	ENST00000488536	HAX1	O00165	279 aa		10.85	□□□□□ -0.67
UBA7-208	ENST00000488536	CHEK1	O14757	476 aa		10.85	□□□□□ -0.67
UBA7-208	ENST00000488536	CA1	P00915	261 aa	Predicted RBP	10.85	□□□□□ -0.67
UBA7-208	ENST00000488536	FSHB	P01225	129 aa		10.85	□□□□□ -0.67
UBA7-208	ENST00000488536	RIG	Q13278	110 aa		10.85	□□□□□ -0.67
UBA7-208	ENST00000488536	SAMD13	Q5VXD3	122 aa		10.85	□□□□□ -0.67
UBA7-208	ENST00000488536	GATD1	Q8NB37	220 aa		10.85	□□□□□ -0.67
UBA7-208	ENST00000488536	OR2D3	Q8NGH3	330 aa		10.85	□□□□□ -0.67
UBA7-208	ENST00000488536	BORCS7	Q96B45	105 aa		10.85	□□□□□ -0.67
UBA7-208	ENST00000488536	MS4A10	Q96PG2	267 aa		10.85	□□□□□ -0.67
UBA7-208	ENST00000488536	PPP1R14D	Q9NXH3	145 aa		10.85	□□□□□ -0.67
UBA7-208	ENST00000488536	DCHS2	Q6V1P9	2916 aa		10.85	□□□□□ -0.67
UBA7-208	ENST00000488536	TRAV8-1	A0A0A6YYK1	113 aa		10.84	□□□□□ -0.67
UBA7-208	ENST00000488536	IQCJ	Q1A5X6	159 aa		10.84	□□□□□ -0.67
UBA7-208	ENST00000488536	LINC00322	Q6ZN03	302 aa	Predicted RBP	10.84	□□□□□ -0.67
UBA7-208	ENST00000488536	ZC2HC1A	Q96GY0	325 aa		10.84	□□□□□ -0.67
UBA7-208	ENST00000488536	SGK494	Q96LW2	274 aa		10.84	□□□□□ -0.67
UBA7-208	ENST00000488536	GSN-AS1	Q9NRJ2	163 aa		10.84	□□□□□ -0.67
UBA7-208	ENST00000488536	CACNA1B	Q00975	2339 aa		10.84	□□□□□ -0.67
UBA7-208	ENST00000488536	ABCA2	Q9BZC7	2435 aa		10.83	□□□□□ -0.68
UBA7-208	ENST00000488536	PCP4L1	A6NKN8	68 aa		10.83	□□□□□ -0.68
UBA7-208	ENST00000488536		M0R3E3	92 aa		10.83	□□□□□ -0.68
UBA7-208	ENST00000488536	TGFA	P01135	160 aa		10.83	□□□□□ -0.68
UBA7-208	ENST00000488536	CFHR3	Q02985	330 aa		10.83	□□□□□ -0.68
UBA7-208	ENST00000488536	LY6E	Q16553	131 aa		10.83	□□□□□ -0.68
UBA7-208	ENST00000488536	LCN12	Q6JVE5	192 aa		10.83	□□□□□ -0.68
UBA7-208	ENST00000488536	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		10.83	□□□□□ -0.68
UBA7-208	ENST00000488536	BCL6B	Q8N143	479 aa	Predicted RBP	10.83	□□□□□ -0.68
UBA7-208	ENST00000488536	PRR25	Q96S07	402 aa		10.83	□□□□□ -0.68
UBA7-208	ENST00000488536		A0A1B0GUT8	65 aa		10.82	□□□□□ -0.68
UBA7-208	ENST00000488536	SH2D7	A6NKC9	451 aa	Predicted RBP	10.82	□□□□□ -0.68
UBA7-208	ENST00000488536	SPINK4	O60575	86 aa		10.82	□□□□□ -0.68
UBA7-208	ENST00000488536	AVP	P01185	164 aa		10.82	□□□□□ -0.68
UBA7-208	ENST00000488536	SRI	P30626	198 aa		10.82	□□□□□ -0.68
UBA7-208	ENST00000488536	SLC35B1	P78383	322 aa		10.82	□□□□□ -0.68
UBA7-208	ENST00000488536	GTSF1	Q8WW33	167 aa		10.82	□□□□□ -0.68
UBA7-208	ENST00000488536	PRDM13	Q9H4Q3	707 aa		10.82	□□□□□ -0.68
UBA7-208	ENST00000488536	LENEP	Q9Y5L5	61 aa		10.82	□□□□□ -0.68
UBA7-208	ENST00000488536	USP9X	Q93008	2570 aa	Predicted RBP	10.82	□□□□□ -0.68
UBA7-208	ENST00000488536	ABCA1	O95477	2261 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms