RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 SRSF2Q01130 221 aaKnown RBP4.44□□□□□ -1.7
HMGB4-202ENST00000458277 KIF26BQ2KJY2 2108 aa4.44□□□□□ -1.7
HMGB4-202ENST00000458277 GDF5OSQ5U4N7 250 aa4.44□□□□□ -1.7
HMGB4-202ENST00000458277 HRCT1Q6UXD1 115 aa4.44□□□□□ -1.7
HMGB4-202ENST00000458277 Q6ZRM9 215 aa4.44□□□□□ -1.7
HMGB4-202ENST00000458277 AAED1Q7RTV5 226 aa4.44□□□□□ -1.7
HMGB4-202ENST00000458277 ORMDL3Q8N138 153 aa4.44□□□□□ -1.7
HMGB4-202ENST00000458277 Q8N1Y9 231 aa4.44□□□□□ -1.7
HMGB4-202ENST00000458277 TMEM86BQ8N661 226 aa4.44□□□□□ -1.7
HMGB4-202ENST00000458277 STPG3Q8N7X2 389 aa4.44□□□□□ -1.7
HMGB4-202ENST00000458277 IL17DQ8TAD2 202 aa4.44□□□□□ -1.7
HMGB4-202ENST00000458277 RNF138Q8WVD3 245 aa4.44□□□□□ -1.7
HMGB4-202ENST00000458277 SCAMP4Q969E2 229 aa4.44□□□□□ -1.7
HMGB4-202ENST00000458277 ODF3Q96PU9 254 aa4.44□□□□□ -1.7
HMGB4-202ENST00000458277 RTL8AQ9BWD3 113 aa4.44□□□□□ -1.7
HMGB4-202ENST00000458277 TP73-AS1Q9UF72 201 aa4.44□□□□□ -1.7
HMGB4-202ENST00000458277 SELENOKQ9Y6D0 94 aa4.44□□□□□ -1.7
HMGB4-202ENST00000458277 U3KQK5 164 aa4.44□□□□□ -1.7
HMGB4-202ENST00000458277 DOCK8Q8NF50 2099 aa4.44□□□□□ -1.7
HMGB4-202ENST00000458277 TRGV11A0A075B6L2 103 aa4.43□□□□□ -1.7
HMGB4-202ENST00000458277 A0A0G2JRQ6 117 aa4.43□□□□□ -1.7
HMGB4-202ENST00000458277 TRBV6-1A0A0K0K1D8 114 aa4.43□□□□□ -1.7
HMGB4-202ENST00000458277 A0A0U1RRA0 63 aa4.43□□□□□ -1.7
HMGB4-202ENST00000458277 RBAKDNA6NC62 111 aa4.43□□□□□ -1.7
HMGB4-202ENST00000458277 LINC01546A6NGU7 62 aa4.43□□□□□ -1.7
HMGB4-202ENST00000458277 H7C1H1 209 aa4.43□□□□□ -1.7
HMGB4-202ENST00000458277 PEX7O00628 323 aa4.43□□□□□ -1.7
HMGB4-202ENST00000458277 KLK10O43240 276 aa4.43□□□□□ -1.7
HMGB4-202ENST00000458277 WISP2O76076 250 aa4.43□□□□□ -1.7
HMGB4-202ENST00000458277 PRSS1P07477 247 aa4.43□□□□□ -1.7
HMGB4-202ENST00000458277 COX6CP09669 75 aa4.43□□□□□ -1.7
HMGB4-202ENST00000458277 PFN2P35080 140 aa4.43□□□□□ -1.7
HMGB4-202ENST00000458277 FBXW4P57775 412 aa4.43□□□□□ -1.7
HMGB4-202ENST00000458277 NXPH1P58417 271 aa4.43□□□□□ -1.7
HMGB4-202ENST00000458277 NPC2P61916 151 aa4.43□□□□□ -1.7
HMGB4-202ENST00000458277 ZNF56Q15929 161 aa4.43□□□□□ -1.7
HMGB4-202ENST00000458277 ZNF542PQ5EBM4 170 aa4.43□□□□□ -1.7
HMGB4-202ENST00000458277 PAPPA-AS1Q5QFB9 102 aa4.43□□□□□ -1.7
HMGB4-202ENST00000458277 IL17RELQ6ZVW7 336 aa4.43□□□□□ -1.7
HMGB4-202ENST00000458277 MKXQ8IYA7 352 aa4.43□□□□□ -1.7
HMGB4-202ENST00000458277 TMEM116Q8NCL8 245 aa4.43□□□□□ -1.7
HMGB4-202ENST00000458277 C18orf15Q96N68 181 aa4.43□□□□□ -1.7
HMGB4-202ENST00000458277 LSM4Q9Y4Z0 139 aaKnown RBP4.43□□□□□ -1.7
HMGB4-202ENST00000458277 SERP1Q9Y6X1 66 aa4.43□□□□□ -1.7
HMGB4-202ENST00000458277 KIAA0100Q14667 2235 aaKnown RBP4.43□□□□□ -1.7
HMGB4-202ENST00000458277 SMIM26A0A096LP01 95 aa4.42□□□□□ -1.7
HMGB4-202ENST00000458277 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.42□□□□□ -1.7
HMGB4-202ENST00000458277 TRGV8A0A0C4DH27 118 aa4.42□□□□□ -1.7
HMGB4-202ENST00000458277 A8MZ25 164 aa4.42□□□□□ -1.7
HMGB4-202ENST00000458277 J3QQQ9 107 aa4.42□□□□□ -1.7
HMGB4-202ENST00000458277 COL4A2P08572 1712 aa4.42□□□□□ -1.7
HMGB4-202ENST00000458277 P0C879 139 aa4.42□□□□□ -1.7
HMGB4-202ENST00000458277 RPL35AP18077 110 aaKnown RBP4.42□□□□□ -1.7
HMGB4-202ENST00000458277 CA6P23280 308 aa4.42□□□□□ -1.7
HMGB4-202ENST00000458277 COL8A2P25067 703 aa4.42□□□□□ -1.7
HMGB4-202ENST00000458277 FGF12P61328 243 aa4.42□□□□□ -1.7
HMGB4-202ENST00000458277 SRSF9Q13242 221 aaKnown RBP eCLIP4.42□□□□□ -1.7
HMGB4-202ENST00000458277 TMEM155Q4W5P6 130 aa4.42□□□□□ -1.7
HMGB4-202ENST00000458277 Q5XG85 94 aa4.42□□□□□ -1.7
HMGB4-202ENST00000458277 Q6ZT83 130 aa4.42□□□□□ -1.7
HMGB4-202ENST00000458277 FAM90A1Q86YD7 464 aa4.42□□□□□ -1.7
HMGB4-202ENST00000458277 Q8N7P7 452 aa4.42□□□□□ -1.7
HMGB4-202ENST00000458277 POM121L12Q8N7R1 296 aa4.42□□□□□ -1.7
HMGB4-202ENST00000458277 RFESDQ8TAC1 157 aa4.42□□□□□ -1.7
HMGB4-202ENST00000458277 LINC00477Q96M19 166 aa4.42□□□□□ -1.7
HMGB4-202ENST00000458277 SCNM1Q9BWG6 230 aa4.42□□□□□ -1.7
HMGB4-202ENST00000458277 PLA2G2FQ9BZM2 168 aa4.42□□□□□ -1.7
HMGB4-202ENST00000458277 C6orf106Q9H6K1 298 aaPredicted RBP4.42□□□□□ -1.7
HMGB4-202ENST00000458277 PRO1854Q9UHT4 67 aa4.42□□□□□ -1.7
HMGB4-202ENST00000458277 HHLA3Q9XRX5 114 aa4.42□□□□□ -1.7
HMGB4-202ENST00000458277 PYGO1Q9Y3Y4 419 aa4.42□□□□□ -1.7
HMGB4-202ENST00000458277 RANBP2P49792 3224 aaKnown RBP4.41□□□□□ -1.7
HMGB4-202ENST00000458277 DOCK9Q9BZ29 2069 aa4.41□□□□□ -1.7
HMGB4-202ENST00000458277 TRAV12-1A0A0B4J245 112 aa4.41□□□□□ -1.7
HMGB4-202ENST00000458277 IGKV1D-13A0A0B4J2D9 117 aa4.41□□□□□ -1.7
HMGB4-202ENST00000458277 A0A0J9YW62 118 aa4.41□□□□□ -1.7
HMGB4-202ENST00000458277 C19orf71A6NCJ1 209 aa4.41□□□□□ -1.7
HMGB4-202ENST00000458277 SRRM4A7MD48 611 aaKnown RBP4.41□□□□□ -1.7
HMGB4-202ENST00000458277 K7EMI3 77 aa4.41□□□□□ -1.7
HMGB4-202ENST00000458277 SPRY1O43609 319 aaPredicted RBP4.41□□□□□ -1.7
HMGB4-202ENST00000458277 TCL1BO95988 128 aa4.41□□□□□ -1.7
HMGB4-202ENST00000458277 PLAUP00749 431 aa4.41□□□□□ -1.7
HMGB4-202ENST00000458277 LTAP01374 205 aa4.41□□□□□ -1.7
HMGB4-202ENST00000458277 IGKV1-39P01597 117 aa4.41□□□□□ -1.7
HMGB4-202ENST00000458277 IGKV1D-16P01601 117 aa4.41□□□□□ -1.7
HMGB4-202ENST00000458277 IGKV1D-39P04432 117 aa4.41□□□□□ -1.7
HMGB4-202ENST00000458277 IGKV1-13P0DP09 117 aa4.41□□□□□ -1.7
HMGB4-202ENST00000458277 B4GALT1P15291 398 aa4.41□□□□□ -1.7
HMGB4-202ENST00000458277 PRDX2P32119 198 aa4.41□□□□□ -1.7
HMGB4-202ENST00000458277 SUB1P53999 127 aaKnown RBP eCLIP4.41□□□□□ -1.7
HMGB4-202ENST00000458277 ATP5EP56381 51 aaPredicted RBP4.41□□□□□ -1.7
HMGB4-202ENST00000458277 HERVK_113P61574 105 aa4.41□□□□□ -1.7
HMGB4-202ENST00000458277 ERVK-16P61578 105 aa4.41□□□□□ -1.7
HMGB4-202ENST00000458277 CD164Q04900 197 aa4.41□□□□□ -1.7
HMGB4-202ENST00000458277 C4orf26Q17RF5 130 aa4.41□□□□□ -1.7
HMGB4-202ENST00000458277 VMA21Q3ZAQ7 101 aa4.41□□□□□ -1.7
HMGB4-202ENST00000458277 FAM201AQ5SY85 155 aa4.41□□□□□ -1.7
HMGB4-202ENST00000458277 ZC2HC1BQ5TFG8 222 aa4.41□□□□□ -1.7
HMGB4-202ENST00000458277 MIC13Q5XKP0 118 aa4.41□□□□□ -1.7
HMGB4-202ENST00000458277 Q6ZQT7 251 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms