RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 MCM3APO60318 1980 aa9.08□□□□□ -0.96
CACNA1C-217ENST00000399641 BUB3O43684 328 aa9.08□□□□□ -0.96
CACNA1C-217ENST00000399641 SRP19P09132 144 aaKnown RBP9.08□□□□□ -0.96
CACNA1C-217ENST00000399641 CFHR2P36980 270 aa9.08□□□□□ -0.96
CACNA1C-217ENST00000399641 ATP5IP56385 69 aaPredicted RBP9.08□□□□□ -0.96
CACNA1C-217ENST00000399641 H2BFSP57053 126 aa9.08□□□□□ -0.96
CACNA1C-217ENST00000399641 SEM1Q6ZVN7 128 aa9.08□□□□□ -0.96
CACNA1C-217ENST00000399641 OCC1Q8TAD7 63 aa9.08□□□□□ -0.96
CACNA1C-217ENST00000399641 RHODO00212 210 aa9.08□□□□□ -0.96
CACNA1C-217ENST00000399641 SPINK13Q1W4C9 94 aa9.08□□□□□ -0.96
CACNA1C-217ENST00000399641 COX7B2Q8TF08 81 aa9.08□□□□□ -0.96
CACNA1C-217ENST00000399641 MDC1Q14676 2089 aaKnown RBP9.07□□□□□ -0.96
CACNA1C-217ENST00000399641 C12orf77C9JDV5 145 aa9.07□□□□□ -0.96
CACNA1C-217ENST00000399641 ZNF318Q5VUA4 2279 aa9.07□□□□□ -0.96
CACNA1C-217ENST00000399641 IGLV3-9A0A075B6K5 115 aa9.07□□□□□ -0.96
CACNA1C-217ENST00000399641 PPP1R3EQ9H7J1 279 aa9.07□□□□□ -0.96
CACNA1C-217ENST00000399641 QSER1Q2KHR3 1735 aa9.07□□□□□ -0.96
CACNA1C-217ENST00000399641 J3QLI3 93 aa9.07□□□□□ -0.96
CACNA1C-217ENST00000399641 TM2D2Q9BX73 214 aa9.07□□□□□ -0.96
CACNA1C-217ENST00000399641 IGLV10-54A0A075B6I4 117 aa9.07□□□□□ -0.96
CACNA1C-217ENST00000399641 F6UB75 175 aa9.07□□□□□ -0.96
CACNA1C-217ENST00000399641 C8orf49Q96NF6 230 aa9.07□□□□□ -0.96
CACNA1C-217ENST00000399641 LINC01551Q86U37 167 aa9.06□□□□□ -0.96
CACNA1C-217ENST00000399641 SMIM20Q8N5G0 67 aa9.06□□□□□ -0.96
CACNA1C-217ENST00000399641 C17orf77Q96MU5 243 aa9.06□□□□□ -0.96
CACNA1C-217ENST00000399641 FANCD2OSQ96PS1 177 aa9.06□□□□□ -0.96
CACNA1C-217ENST00000399641 A0A096LNI7 61 aa9.06□□□□□ -0.96
CACNA1C-217ENST00000399641 SRSF2Q01130 221 aaKnown RBP9.06□□□□□ -0.96
CACNA1C-217ENST00000399641 IFITM2Q01629 132 aa9.06□□□□□ -0.96
CACNA1C-217ENST00000399641 IGHV4-38-2P0DP08 117 aa9.06□□□□□ -0.96
CACNA1C-217ENST00000399641 AMN1Q8IY45 258 aa9.06□□□□□ -0.96
CACNA1C-217ENST00000399641 TDRD15B5MCY1 1934 aaKnown RBP9.06□□□□□ -0.96
CACNA1C-217ENST00000399641 Q8NFD4 153 aa9.06□□□□□ -0.96
CACNA1C-217ENST00000399641 IL17DQ8TAD2 202 aa9.06□□□□□ -0.96
CACNA1C-217ENST00000399641 IGHV2-26A0A0B4J1V2 119 aa9.05□□□□□ -0.96
CACNA1C-217ENST00000399641 PINLYPA6NC86 204 aa9.05□□□□□ -0.96
CACNA1C-217ENST00000399641 Q6ZS92 163 aa9.05□□□□□ -0.96
CACNA1C-217ENST00000399641 ESM1Q9NQ30 184 aa9.05□□□□□ -0.96
CACNA1C-217ENST00000399641 CENPVL3A0A0U1RRI6 287 aa9.05□□□□□ -0.96
CACNA1C-217ENST00000399641 WISP3O95389 354 aaPredicted RBP9.05□□□□□ -0.96
CACNA1C-217ENST00000399641 C3orf22Q8N5N4 141 aa9.05□□□□□ -0.96
CACNA1C-217ENST00000399641 THSD7AQ9UPZ6 1657 aa9.05□□□□□ -0.96
CACNA1C-217ENST00000399641 LINC01549A6NIU2 74 aa9.05□□□□□ -0.96
CACNA1C-217ENST00000399641 NDUFS6O75380 124 aaKnown RBP9.05□□□□□ -0.96
CACNA1C-217ENST00000399641 ZC2HC1BQ5TFG8 222 aa9.05□□□□□ -0.96
CACNA1C-217ENST00000399641 PVRIGQ6DKI7 326 aa9.05□□□□□ -0.96
CACNA1C-217ENST00000399641 PPDPFLQ8WWR9 84 aa9.05□□□□□ -0.96
CACNA1C-217ENST00000399641 PSMB8P28062 276 aa9.05□□□□□ -0.96
CACNA1C-217ENST00000399641 C1QCP02747 245 aa9.05□□□□□ -0.96
CACNA1C-217ENST00000399641 TSKUQ8WUA8 353 aa9.05□□□□□ -0.96
CACNA1C-217ENST00000399641 EFNA2O43921 213 aa9.04□□□□□ -0.96
CACNA1C-217ENST00000399641 CRYGSP22914 178 aa9.04□□□□□ -0.96
CACNA1C-217ENST00000399641 COL8A2P25067 703 aa9.04□□□□□ -0.96
CACNA1C-217ENST00000399641 EFNB3Q15768 340 aa9.04□□□□□ -0.96
CACNA1C-217ENST00000399641 ASPHD1Q5U4P2 390 aa9.04□□□□□ -0.96
CACNA1C-217ENST00000399641 CD177Q8N6Q3 437 aa9.04□□□□□ -0.96
CACNA1C-217ENST00000399641 TRAV13-2A0A0B4J235 113 aa9.04□□□□□ -0.96
CACNA1C-217ENST00000399641 IGHMP01871 453 aa9.04□□□□□ -0.96
CACNA1C-217ENST00000399641 HERV-K104P63124 156 aa9.04□□□□□ -0.96
CACNA1C-217ENST00000399641 MST1LQ2TV78 715 aa9.04□□□□□ -0.96
CACNA1C-217ENST00000399641 NPBQ8NG41 125 aa9.04□□□□□ -0.96
CACNA1C-217ENST00000399641 TAF1LQ8IZX4 1826 aa9.04□□□□□ -0.96
CACNA1C-217ENST00000399641 USMG5Q96IX5 58 aa9.04□□□□□ -0.96
CACNA1C-217ENST00000399641 SAA4P35542 130 aa9.04□□□□□ -0.96
CACNA1C-217ENST00000399641 FUSP35637 526 aaKnown RBP eCLIP9.04□□□□□ -0.96
CACNA1C-217ENST00000399641 C10orf55Q5SWW7 151 aa9.04□□□□□ -0.96
CACNA1C-217ENST00000399641 FOCADQ5VW36 1801 aa9.04□□□□□ -0.96
CACNA1C-217ENST00000399641 AMTNQ6UX39 209 aa9.04□□□□□ -0.96
CACNA1C-217ENST00000399641 GTSF1Q8WW33 167 aa9.04□□□□□ -0.96
CACNA1C-217ENST00000399641 Q96M66 194 aa9.04□□□□□ -0.96
CACNA1C-217ENST00000399641 CCDC88CQ9P219 2028 aa9.04□□□□□ -0.96
CACNA1C-217ENST00000399641 ABCA7Q8IZY2 2146 aa9.03□□□□□ -0.96
CACNA1C-217ENST00000399641 UBE2CO00762 179 aa9.03□□□□□ -0.96
CACNA1C-217ENST00000399641 DLEU1O43261 78 aa9.03□□□□□ -0.96
CACNA1C-217ENST00000399641 CFHR4Q92496 578 aa9.03□□□□□ -0.96
CACNA1C-217ENST00000399641 VSIG2Q96IQ7 327 aa9.03□□□□□ -0.96
CACNA1C-217ENST00000399641 LIME1Q9H400 295 aa9.03□□□□□ -0.96
CACNA1C-217ENST00000399641 WDR90Q96KV7 1748 aa9.03□□□□□ -0.96
CACNA1C-217ENST00000399641 IGHV1-8P0DP01 117 aa9.03□□□□□ -0.96
CACNA1C-217ENST00000399641 HLA-DRB4P13762 266 aa9.03□□□□□ -0.96
CACNA1C-217ENST00000399641 HRCT1Q6UXD1 115 aa9.03□□□□□ -0.96
CACNA1C-217ENST00000399641 HLA-DRB4X5D2U9 266 aa9.03□□□□□ -0.96
CACNA1C-217ENST00000399641 MST1P26927 711 aa9.03□□□□□ -0.96
CACNA1C-217ENST00000399641 C9orf66Q5T8R8 295 aa9.03□□□□□ -0.96
CACNA1C-217ENST00000399641 SLC25A48Q6ZT89 311 aaKnown RBP9.03□□□□□ -0.96
CACNA1C-217ENST00000399641 TMEM178BH3BS89 294 aa9.03□□□□□ -0.96
CACNA1C-217ENST00000399641 ETV2O00321 342 aaPredicted RBP9.03□□□□□ -0.96
CACNA1C-217ENST00000399641 TRPT1Q86TN4 253 aaKnown RBP9.03□□□□□ -0.96
CACNA1C-217ENST00000399641 SMPXQ9UHP9 88 aa9.03□□□□□ -0.96
CACNA1C-217ENST00000399641 PPBPP02775 128 aa9.02□□□□□ -0.96
CACNA1C-217ENST00000399641 BAALC-AS2P0C853 105 aa9.02□□□□□ -0.96
CACNA1C-217ENST00000399641 ZNF362Q5T0B9 420 aaPredicted RBP9.02□□□□□ -0.96
CACNA1C-217ENST00000399641 FAM110AQ9BQ89 295 aa9.02□□□□□ -0.97
CACNA1C-217ENST00000399641 TRBV7-1A0A0A6YYK4 115 aa9.02□□□□□ -0.97
CACNA1C-217ENST00000399641 THADAQ6YHU6 1953 aa9.02□□□□□ -0.97
CACNA1C-217ENST00000399641 CCL20P78556 96 aa9.02□□□□□ -0.97
CACNA1C-217ENST00000399641 H3BMG7 143 aa9.02□□□□□ -0.97
CACNA1C-217ENST00000399641 ATRAIDQ6UW56 229 aa9.02□□□□□ -0.97
CACNA1C-217ENST00000399641 VWCEQ96DN2 955 aa9.02□□□□□ -0.97
CACNA1C-217ENST00000399641 NPDC1Q9NQX5 325 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms