RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 SAPCD1Q5SSQ6 148 aa14.19□□□□□ -0.14
CD40-201ENST00000372276 LINC00322Q6ZN03 302 aaPredicted RBP14.19□□□□□ -0.14
CD40-201ENST00000372276 COX8CQ7Z4L0 72 aa14.19□□□□□ -0.14
CD40-201ENST00000372276 GATD1Q8NB37 220 aa14.19□□□□□ -0.14
CD40-201ENST00000372276 GTSF1Q8WW33 167 aa14.19□□□□□ -0.14
CD40-201ENST00000372276 PGLYRP4Q96LB8 373 aa14.19□□□□□ -0.14
CD40-201ENST00000372276 RCHY1Q96PM5 261 aa14.19□□□□□ -0.14
CD40-201ENST00000372276 UBTD1Q9HAC8 227 aa14.19□□□□□ -0.14
CD40-201ENST00000372276 RABAC1Q9UI14 185 aa14.19□□□□□ -0.14
CD40-201ENST00000372276 IGHV7-81A0A0B4J1V7 117 aa14.18□□□□□ -0.14
CD40-201ENST00000372276 LINC00469Q8N7U9 141 aa14.18□□□□□ -0.14
CD40-201ENST00000372276 Q8N9W7 124 aa14.18□□□□□ -0.14
CD40-201ENST00000372276 ATP6V0BQ99437 205 aa14.18□□□□□ -0.14
CD40-201ENST00000372276 COL6A6A6NMZ7 2263 aa14.17□□□□□ -0.14
CD40-201ENST00000372276 A0A1B0GUT8 65 aa14.17□□□□□ -0.14
CD40-201ENST00000372276 A0A1W2PRD5 423 aa14.17□□□□□ -0.14
CD40-201ENST00000372276 A0A1W2PRF3 423 aa14.17□□□□□ -0.14
CD40-201ENST00000372276 A0A1W2PRM7 423 aa14.17□□□□□ -0.14
CD40-201ENST00000372276 C20orf202A1L168 122 aa14.17□□□□□ -0.14
CD40-201ENST00000372276 CD24P25063 80 aa14.17□□□□□ -0.14
CD40-201ENST00000372276 CDKN1AP38936 164 aa14.17□□□□□ -0.14
CD40-201ENST00000372276 NIT1Q86X76 327 aa14.17□□□□□ -0.14
CD40-201ENST00000372276 DYNAPQ8N1N2 210 aa14.17□□□□□ -0.14
CD40-201ENST00000372276 KLHDC1Q8N7A1 406 aa14.17□□□□□ -0.14
CD40-201ENST00000372276 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.16□□□□□ -0.14
CD40-201ENST00000372276 VWC2LB2RUY7 222 aa14.16□□□□□ -0.14
CD40-201ENST00000372276 KLF17Q5JT82 389 aaPredicted RBP14.16□□□□□ -0.14
CD40-201ENST00000372276 ITLN2Q8WWU7 325 aaPredicted RBP14.16□□□□□ -0.14
CD40-201ENST00000372276 F8W735 103 aaPredicted RBP14.15□□□□□ -0.14
CD40-201ENST00000372276 OR5AL1P0C617 328 aa14.15□□□□□ -0.14
CD40-201ENST00000372276 EGR2P11161 476 aaPredicted RBP14.15□□□□□ -0.14
CD40-201ENST00000372276 RPS20P60866 119 aaKnown RBP14.15□□□□□ -0.14
CD40-201ENST00000372276 NDPQ00604 133 aa14.15□□□□□ -0.14
CD40-201ENST00000372276 TRAV8-1A0A0A6YYK1 113 aa14.15□□□□□ -0.14
CD40-201ENST00000372276 M0R2Z0 102 aa14.15□□□□□ -0.14
CD40-201ENST00000372276 CTSGP08311 255 aa14.15□□□□□ -0.14
CD40-201ENST00000372276 LMO4P61968 165 aa14.15□□□□□ -0.14
CD40-201ENST00000372276 ZC2HC1AQ96GY0 325 aa14.15□□□□□ -0.14
CD40-201ENST00000372276 LOC102724200A0A096LPH7 203 aaPredicted RBP14.14□□□□□ -0.15
CD40-201ENST00000372276 C3orf79P0CE67 100 aa14.14□□□□□ -0.15
CD40-201ENST00000372276 NTF3P20783 257 aa14.14□□□□□ -0.15
CD40-201ENST00000372276 Q8N976 141 aa14.14□□□□□ -0.15
CD40-201ENST00000372276 SSBP4Q9BWG4 385 aaPredicted RBP14.14□□□□□ -0.15
CD40-201ENST00000372276 SH2D7A6NKC9 451 aaPredicted RBP14.13□□□□□ -0.15
CD40-201ENST00000372276 OVOL3O00110 214 aa14.13□□□□□ -0.15
CD40-201ENST00000372276 BTF3P20290 206 aaKnown RBP14.13□□□□□ -0.15
CD40-201ENST00000372276 RNASEKQ6P5S7 137 aaKnown RBP14.13□□□□□ -0.15
CD40-201ENST00000372276 ZNF705AQ6ZN79 300 aaPredicted RBP14.13□□□□□ -0.15
CD40-201ENST00000372276 C17orf77Q96MU5 243 aa14.13□□□□□ -0.15
CD40-201ENST00000372276 ABCA1O95477 2261 aa14.13□□□□□ -0.15
CD40-201ENST00000372276 A0A1W2PPR1 153 aa14.12□□□□□ -0.15
CD40-201ENST00000372276 FAM181BA6NEQ2 426 aa14.12□□□□□ -0.15
CD40-201ENST00000372276 APOHP02749 345 aaPredicted RBP14.12□□□□□ -0.15
CD40-201ENST00000372276 CD33P20138 364 aa14.12□□□□□ -0.15
CD40-201ENST00000372276 BMI1P35226 326 aa14.12□□□□□ -0.15
CD40-201ENST00000372276 SRSF2Q01130 221 aaKnown RBP14.12□□□□□ -0.15
CD40-201ENST00000372276 UNQ5815/PRO19632Q6UWF5 114 aa14.12□□□□□ -0.15
CD40-201ENST00000372276 ZNF502Q8TBZ5 544 aa14.12□□□□□ -0.15
CD40-201ENST00000372276 PAM16Q9Y3D7 125 aa14.12□□□□□ -0.15
CD40-201ENST00000372276 ARHGAP32A7KAX9 2087 aa14.12□□□□□ -0.15
CD40-201ENST00000372276 A0A087X0K7 114 aa14.12□□□□□ -0.15
CD40-201ENST00000372276 NPFFO15130 113 aa14.12□□□□□ -0.15
CD40-201ENST00000372276 TMUB1Q9BVT8 246 aa14.12□□□□□ -0.15
CD40-201ENST00000372276 ADGRG4Q8IZF6 3080 aa14.11□□□□□ -0.15
CD40-201ENST00000372276 TRBV7-1A0A0A6YYK4 115 aa14.11□□□□□ -0.15
CD40-201ENST00000372276 OR2T8A6NH00 312 aa14.11□□□□□ -0.15
CD40-201ENST00000372276 SAA4P35542 130 aa14.11□□□□□ -0.15
CD40-201ENST00000372276 FAM19A2Q8N3H0 131 aa14.11□□□□□ -0.15
CD40-201ENST00000372276 EEF1AKMT3Q96AZ1 226 aa14.11□□□□□ -0.15
CD40-201ENST00000372276 UQCR10Q9UDW1 63 aa14.11□□□□□ -0.15
CD40-201ENST00000372276 CENPVL3A0A0U1RRI6 287 aa14.1□□□□□ -0.15
CD40-201ENST00000372276 LINC00614P0C842 121 aa14.1□□□□□ -0.15
CD40-201ENST00000372276 CTRLP40313 264 aa14.1□□□□□ -0.15
CD40-201ENST00000372276 AJUBAQ96IF1 538 aa14.1□□□□□ -0.15
CD40-201ENST00000372276 BPESC1Q9GZL8 116 aa14.1□□□□□ -0.15
CD40-201ENST00000372276 CLEC5AQ9NY25 188 aa14.1□□□□□ -0.15
CD40-201ENST00000372276 A0A1B0GV90 55 aa14.09□□□□□ -0.15
CD40-201ENST00000372276 TMEM189A5PLL7 270 aa14.09□□□□□ -0.15
CD40-201ENST00000372276 RBAKDNA6NC62 111 aa14.09□□□□□ -0.15
CD40-201ENST00000372276 SPATA45Q537H7 98 aa14.09□□□□□ -0.15
CD40-201ENST00000372276 ZNF493Q6ZR52 646 aa14.09□□□□□ -0.15
CD40-201ENST00000372276 SLC50A1Q9BRV3 221 aa14.09□□□□□ -0.15
CD40-201ENST00000372276 SNHG12Q9BXW3 62 aa14.09□□□□□ -0.15
CD40-201ENST00000372276 ZNF462Q96JM2 2506 aa14.09□□□□□ -0.15
CD40-201ENST00000372276 NDUFS8O00217 210 aa14.08□□□□□ -0.15
CD40-201ENST00000372276 NDUFS7O75251 213 aa14.08□□□□□ -0.15
CD40-201ENST00000372276 NUTF2P61970 127 aaKnown RBP14.08□□□□□ -0.15
CD40-201ENST00000372276 RELQ04864 619 aaPredicted RBP14.08□□□□□ -0.15
CD40-201ENST00000372276 C15orf32Q32M92 178 aa14.08□□□□□ -0.15
CD40-201ENST00000372276 FBLN7Q53RD9 439 aa14.08□□□□□ -0.15
CD40-201ENST00000372276 TMEM70Q9BUB7 260 aa14.08□□□□□ -0.15
CD40-201ENST00000372276 S4R3C0 116 aa14.08□□□□□ -0.15
CD40-201ENST00000372276 ZNF785A8K8V0 405 aa14.08□□□□□ -0.16
CD40-201ENST00000372276 CRXO43186 299 aaPredicted RBP14.08□□□□□ -0.16
CD40-201ENST00000372276 RHOGP84095 191 aa14.08□□□□□ -0.16
CD40-201ENST00000372276 PAX8Q06710 450 aa14.08□□□□□ -0.16
CD40-201ENST00000372276 TDRG1Q3Y452 100 aa14.08□□□□□ -0.16
CD40-201ENST00000372276 M0R3E3 92 aa14.07□□□□□ -0.16
CD40-201ENST00000372276 CRIP2P52943 208 aaPredicted RBP14.07□□□□□ -0.16
CD40-201ENST00000372276 FAM120AOSQ5T036 256 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms