RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 BMPR1BO00238 502 aa11.61□□□□□ -0.55
GABPB1-202ENST00000359031 IGLV2-11P01706 119 aa11.61□□□□□ -0.55
GABPB1-202ENST00000359031 MSMBP08118 114 aa11.61□□□□□ -0.55
GABPB1-202ENST00000359031 Q0VG73 95 aa11.61□□□□□ -0.55
GABPB1-202ENST00000359031 JOSD1Q15040 202 aaPredicted RBP11.61□□□□□ -0.55
GABPB1-202ENST00000359031 MRPL54Q6P161 138 aaKnown RBP11.61□□□□□ -0.55
GABPB1-202ENST00000359031 ATP5L2Q7Z4Y8 100 aa11.61□□□□□ -0.55
GABPB1-202ENST00000359031 OR5R1Q8NH85 324 aa11.61□□□□□ -0.55
GABPB1-202ENST00000359031 PRSS22Q9GZN4 317 aa11.61□□□□□ -0.55
GABPB1-202ENST00000359031 ZNF331Q9NQX6 463 aaPredicted RBP11.61□□□□□ -0.55
GABPB1-202ENST00000359031 WNK2Q9Y3S1 2297 aa11.61□□□□□ -0.55
GABPB1-202ENST00000359031 IGHV3OR16-10A0A075B7F0 116 aa11.6□□□□□ -0.55
GABPB1-202ENST00000359031 SPINK4O60575 86 aa11.6□□□□□ -0.55
GABPB1-202ENST00000359031 P01737 135 aa11.6□□□□□ -0.55
GABPB1-202ENST00000359031 FRMD6-AS1P0C7T7 363 aa11.6□□□□□ -0.55
GABPB1-202ENST00000359031 ESDP10768 282 aa11.6□□□□□ -0.55
GABPB1-202ENST00000359031 SLC35B1P78383 322 aa11.6□□□□□ -0.55
GABPB1-202ENST00000359031 PSG9Q00887 426 aa11.6□□□□□ -0.55
GABPB1-202ENST00000359031 MED13LQ71F56 2210 aa11.6□□□□□ -0.55
GABPB1-202ENST00000359031 ARL6IP6Q8N6S5 226 aa11.6□□□□□ -0.55
GABPB1-202ENST00000359031 NUP35Q8NFH5 326 aa11.6□□□□□ -0.55
GABPB1-202ENST00000359031 OR4B1Q8NGF8 309 aa11.6□□□□□ -0.55
GABPB1-202ENST00000359031 EEF1AKMT3Q96AZ1 226 aa11.6□□□□□ -0.55
GABPB1-202ENST00000359031 C17orf77Q96MU5 243 aa11.6□□□□□ -0.55
GABPB1-202ENST00000359031 NEU1Q99519 415 aa11.6□□□□□ -0.55
GABPB1-202ENST00000359031 ABCA2Q9BZC7 2435 aa11.6□□□□□ -0.55
GABPB1-202ENST00000359031 AAMDCQ9H7C9 122 aa11.6□□□□□ -0.55
GABPB1-202ENST00000359031 ZFHX3Q15911 3703 aa11.6□□□□□ -0.55
GABPB1-202ENST00000359031 AKAP9Q99996 3911 aa11.6□□□□□ -0.55
GABPB1-202ENST00000359031 A8MWL6 223 aa11.6□□□□□ -0.55
GABPB1-202ENST00000359031 GPR183P32249 361 aa11.6□□□□□ -0.55
GABPB1-202ENST00000359031 PRNTQ86SH4 94 aa11.6□□□□□ -0.55
GABPB1-202ENST00000359031 DAZAP1Q96EP5 407 aaKnown RBP11.6□□□□□ -0.55
GABPB1-202ENST00000359031 ATP6V0BQ99437 205 aa11.6□□□□□ -0.55
GABPB1-202ENST00000359031 GFRA4Q9GZZ7 299 aa11.6□□□□□ -0.55
GABPB1-202ENST00000359031 ZFP30Q9Y2G7 519 aa11.6□□□□□ -0.55
GABPB1-202ENST00000359031 SOX21Q9Y651 276 aaPredicted RBP11.6□□□□□ -0.55
GABPB1-202ENST00000359031 TRAV8-1A0A0A6YYK1 113 aa11.59□□□□□ -0.55
GABPB1-202ENST00000359031 TRBV7-1A0A0A6YYK4 115 aa11.59□□□□□ -0.55
GABPB1-202ENST00000359031 GRIFINA4D1Z8 144 aa11.59□□□□□ -0.55
GABPB1-202ENST00000359031 DIRC3C9JPN6 131 aa11.59□□□□□ -0.55
GABPB1-202ENST00000359031 NPIPB6E9PJ23 425 aa11.59□□□□□ -0.55
GABPB1-202ENST00000359031 ZNF253O75346 499 aa11.59□□□□□ -0.55
GABPB1-202ENST00000359031 RAB9AP51151 201 aa11.59□□□□□ -0.55
GABPB1-202ENST00000359031 RAB4BP61018 213 aa11.59□□□□□ -0.55
GABPB1-202ENST00000359031 PSG3Q16557 428 aa11.59□□□□□ -0.55
GABPB1-202ENST00000359031 C19orf54Q5BKX5 351 aa11.59□□□□□ -0.55
GABPB1-202ENST00000359031 BRD3OSQ6XYD6 125 aa11.59□□□□□ -0.55
GABPB1-202ENST00000359031 TMEM219Q86XT9 240 aa11.59□□□□□ -0.55
GABPB1-202ENST00000359031 BCL6BQ8N143 479 aaPredicted RBP11.59□□□□□ -0.55
GABPB1-202ENST00000359031 TMEM256Q8N2U0 113 aa11.59□□□□□ -0.55
GABPB1-202ENST00000359031 PIFOQ8TCI5 191 aa11.59□□□□□ -0.55
GABPB1-202ENST00000359031 FAM231BA6NCW3 169 aa11.58□□□□□ -0.56
GABPB1-202ENST00000359031 HIGD1CA8MV81 97 aa11.58□□□□□ -0.56
GABPB1-202ENST00000359031 G3V318 75 aa11.58□□□□□ -0.56
GABPB1-202ENST00000359031 SLC25A16P16260 332 aa11.58□□□□□ -0.56
GABPB1-202ENST00000359031 CSN1S1P47710 185 aa11.58□□□□□ -0.56
GABPB1-202ENST00000359031 OR10J3Q5JRS4 329 aa11.58□□□□□ -0.56
GABPB1-202ENST00000359031 LINC00322Q6ZN03 302 aaPredicted RBP11.58□□□□□ -0.56
GABPB1-202ENST00000359031 ZFAND3Q9H8U3 227 aa11.58□□□□□ -0.56
GABPB1-202ENST00000359031 TP53TG3Q9ULZ0 132 aa11.58□□□□□ -0.56
GABPB1-202ENST00000359031 PSG8Q9UQ74 426 aa11.58□□□□□ -0.56
GABPB1-202ENST00000359031 TRAV41A0A0B4J266 112 aa11.57□□□□□ -0.56
GABPB1-202ENST00000359031 TRAV20A0A0B4J274 112 aa11.57□□□□□ -0.56
GABPB1-202ENST00000359031 A0A1B0GUS0 222 aa11.57□□□□□ -0.56
GABPB1-202ENST00000359031 FBLL1A6NHQ2 334 aaKnown RBP11.57□□□□□ -0.56
GABPB1-202ENST00000359031 SH2D7A6NKC9 451 aaPredicted RBP11.57□□□□□ -0.56
GABPB1-202ENST00000359031 FAM223BA6NKX1 122 aa11.57□□□□□ -0.56
GABPB1-202ENST00000359031 B4DSR2 109 aa11.57□□□□□ -0.56
GABPB1-202ENST00000359031 APCSP02743 223 aa11.57□□□□□ -0.56
GABPB1-202ENST00000359031 IGHV4-38-2P0DP08 117 aa11.57□□□□□ -0.56
GABPB1-202ENST00000359031 GATA3P23771 443 aa11.57□□□□□ -0.56
GABPB1-202ENST00000359031 CDPF1Q6NVV7 123 aa11.57□□□□□ -0.56
GABPB1-202ENST00000359031 C16orf54Q6UWD8 224 aa11.57□□□□□ -0.56
GABPB1-202ENST00000359031 FAM223AQ8IWN6 122 aa11.57□□□□□ -0.56
GABPB1-202ENST00000359031 CCDC140Q96MF4 163 aa11.57□□□□□ -0.56
GABPB1-202ENST00000359031 TACC2O95359 2948 aa11.57□□□□□ -0.56
GABPB1-202ENST00000359031 A0A1B0GXF2 115 aa11.57□□□□□ -0.56
GABPB1-202ENST00000359031 LINC01548A6NM66 108 aa11.57□□□□□ -0.56
GABPB1-202ENST00000359031 TPPP2P59282 170 aa11.57□□□□□ -0.56
GABPB1-202ENST00000359031 PAFAH1B2P68402 229 aa11.57□□□□□ -0.56
GABPB1-202ENST00000359031 TOMM20LQ6UXN7 152 aa11.57□□□□□ -0.56
GABPB1-202ENST00000359031 BAGE3Q86Y29 109 aa11.57□□□□□ -0.56
GABPB1-202ENST00000359031 CIARTQ8N365 385 aaPredicted RBP11.57□□□□□ -0.56
GABPB1-202ENST00000359031 A0A087X0K7 114 aa11.56□□□□□ -0.56
GABPB1-202ENST00000359031 A6NDX4 124 aa11.56□□□□□ -0.56
GABPB1-202ENST00000359031 CLEC3BP05452 202 aa11.56□□□□□ -0.56
GABPB1-202ENST00000359031 GZMBP10144 247 aa11.56□□□□□ -0.56
GABPB1-202ENST00000359031 LINC00310P59036 64 aa11.56□□□□□ -0.56
GABPB1-202ENST00000359031 RELQ04864 619 aaPredicted RBP11.56□□□□□ -0.56
GABPB1-202ENST00000359031 PRDM13Q9H4Q3 707 aa11.56□□□□□ -0.56
GABPB1-202ENST00000359031 MTORP42345 2549 aa11.56□□□□□ -0.56
GABPB1-202ENST00000359031 M0QZK8 103 aa11.55□□□□□ -0.56
GABPB1-202ENST00000359031 NUPR1O60356 82 aa11.55□□□□□ -0.56
GABPB1-202ENST00000359031 SERF1AO75920 110 aa11.55□□□□□ -0.56
GABPB1-202ENST00000359031 BRI3O95415 125 aa11.55□□□□□ -0.56
GABPB1-202ENST00000359031 ATP5G2Q06055 141 aa11.55□□□□□ -0.56
GABPB1-202ENST00000359031 CLEC19AQ6UXS0 136 aa11.55□□□□□ -0.56
GABPB1-202ENST00000359031 RBPMS2Q6ZRY4 209 aaKnown RBP11.55□□□□□ -0.56
GABPB1-202ENST00000359031 TCF24Q7RTU0 167 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms