RNA–Protein interactions for RNA: ENSMUST00000023426.11

Cldnd1-201, Transcript of Claudin domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldnd1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1-201ENSMUST00000023426 Arpc1bQ9WV32 372 aaKnown RBP20.57■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Olfr284A0A0U1RP76 321 aa20.56■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Tppp2Q0P5Y3 170 aa20.56■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Trat1Q3UU67 187 aa20.56■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Olfr358Q7TRY5 330 aa20.56■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 EtdQ80SW5 59 aa20.56■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Arl13aQ9D416 372 aa20.56■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Gtsf1Q9DAN6 167 aa20.56■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Ms4a4bQ9ES61 226 aa20.56■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Ighv8-2A0A0A6YW58 119 aa20.56■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Vmn1r113G3UWI8 307 aa20.56■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Gm8677K9J7G9 307 aa20.56■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Syngr2O55101 224 aa20.56■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 ApohQ01339 345 aa20.56■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Fam220aQ3ZN08 260 aa20.56■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Lypd6Q8BPP5 171 aa20.56■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Zfp459Q8BZ17 267 aa20.56■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Rab11fip5Q8R361 645 aa20.56■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Scp2d1Q9DAH1 156 aa20.56■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Obp2bA2BHR0 176 aa20.55■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Ccl3P10855 92 aa20.55■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Meox1P32442 253 aa20.55■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Dhrs2Q149L0 282 aa20.55■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Gm614Q3V2K1 191 aa20.55■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Olfr641Q8VGX6 312 aa20.55■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Hspb9Q9DAM3 168 aa20.55■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 NdnP25233 325 aa20.54■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Spcs3Q6ZWQ7 180 aa20.54■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Olfr987Q7TRA2 309 aa20.54■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Gpr4Q8BUD0 365 aa20.54■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Olfr960Q8VET5 316 aa20.54■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 NanpQ9CPT3 248 aa20.54■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Immp1lQ9CQU8 166 aa20.54■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Gm10306Q9CUK2 115 aa20.54■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Trem3Q9JKE1 183 aa20.54■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Rnd2Q9QYM5 227 aa20.54■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 BC053393A0A0B4J1F6 192 aa20.54■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Klk1b22P15948 259 aa20.54■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Ctdsp1P58466 261 aa20.54■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Q6DIA7 600 aa20.54■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Olfr153Q7TR48 307 aa20.54■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Olfr25Q7TRD6 313 aa20.54■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Znrf1Q91V17 227 aa20.54■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 HpxQ91X72 460 aa20.54■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Ms4a6dQ99N07 247 aa20.54■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Defb3Q9WTL0 63 aa20.54■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Flg2Q2VIS4 2362 aa20.53■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Map1bP14873 2464 aaKnown RBP20.53■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Gm14124A2AU83 715 aa20.53■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Zfp36l1P23950 338 aa20.53■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 AgerQ62151 402 aa20.53■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Tff3Q62395 81 aa20.53■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Exosc2Q8VBV3 293 aaKnown RBP20.53■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Inafm1E9PV59 130 aa20.53■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Rab7aP51150 207 aaKnown RBP20.53■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Loxl1P97873 607 aa20.53■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Fam222bQ6P539 562 aa20.53■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Rnf151Q9CQ29 239 aa20.53■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Lamp5Q9D387 280 aa20.53■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Cox20Q9D7J4 117 aa20.53■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Vps13cQ8BX70 3748 aa20.52■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Gm28372A0A087WNV0 220 aa20.52■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Gm20773A0A0A6YXW2 232 aa20.52■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Gm20807A0A0A6YXX7 232 aa20.52■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Gm20873J3QMQ9 232 aa20.52■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Gm20795J3QP49 232 aa20.52■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Gm21310J3QQ23 232 aa20.52■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Gm21440Q3TTD8 232 aa20.52■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Trav6-2Q5R1I4 113 aa20.52■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Bpifa5Q9CQX3 270 aa20.52■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Znf22Q9ERU3 237 aa20.52■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Mpdu1Q9R0Q9 247 aa20.52■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Crybb1Q9WVJ5 250 aa20.52■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 Frem1Q684R7 2191 aa20.52■□□□□ 0.88
Cldnd1-201ENSMUST00000023426 NacaP70670 2187 aaKnown RBP20.52■□□□□ 0.87
Cldnd1-201ENSMUST00000023426 Chrna7P49582 502 aa20.51■□□□□ 0.87
Cldnd1-201ENSMUST00000023426 Stard4Q99JV5 224 aa20.51■□□□□ 0.87
Cldnd1-201ENSMUST00000023426 Rtl4Q3URY0 304 aa20.51■□□□□ 0.87
Cldnd1-201ENSMUST00000023426 Wdr83osQ6ZWX0 106 aa20.51■□□□□ 0.87
Cldnd1-201ENSMUST00000023426 Gm20825J3QM67 227 aa20.5■□□□□ 0.87
Cldnd1-201ENSMUST00000023426 Gm8653K9J7G2 307 aa20.5■□□□□ 0.87
Cldnd1-201ENSMUST00000023426 Vmn1r117L7N2C9 307 aa20.5■□□□□ 0.87
Cldnd1-201ENSMUST00000023426 P01796 113 aa20.5■□□□□ 0.87
Cldnd1-201ENSMUST00000023426 P01797 113 aa20.5■□□□□ 0.87
Cldnd1-201ENSMUST00000023426 P01799 113 aa20.5■□□□□ 0.87
Cldnd1-201ENSMUST00000023426 HexbP20060 536 aa20.5■□□□□ 0.87
Cldnd1-201ENSMUST00000023426 Bmpr1bP36898 502 aa20.5■□□□□ 0.87
Cldnd1-201ENSMUST00000023426 Ssty2Q149W4 227 aa20.5■□□□□ 0.87
Cldnd1-201ENSMUST00000023426 Gm21394Q497R7 227 aa20.5■□□□□ 0.87
Cldnd1-201ENSMUST00000023426 Gm20854Q62461 227 aa20.5■□□□□ 0.87
Cldnd1-201ENSMUST00000023426 Pgam5Q8BX10 288 aa20.5■□□□□ 0.87
Cldnd1-201ENSMUST00000023426 Trib1Q8K4K4 372 aa20.5■□□□□ 0.87
Cldnd1-201ENSMUST00000023426 Mrpl3Q99N95 348 aa20.5■□□□□ 0.87
Cldnd1-201ENSMUST00000023426 Hoxa5P09021 270 aa20.5■□□□□ 0.87
Cldnd1-201ENSMUST00000023426 Rps16P14131 146 aaKnown RBP20.5■□□□□ 0.87
Cldnd1-201ENSMUST00000023426 Wnt5bP22726 359 aa20.5■□□□□ 0.87
Cldnd1-201ENSMUST00000023426 Pear1Q8VIK5 1034 aa20.5■□□□□ 0.87
Cldnd1-201ENSMUST00000023426 Ccdc198Q9CPZ1 294 aa20.5■□□□□ 0.87
Cldnd1-201ENSMUST00000023426 Rnf7Q9WTZ1 113 aa20.5■□□□□ 0.87
Cldnd1-201ENSMUST00000023426 Tusc2Q9WVF8 110 aa20.5■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms