RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 B9d2Q3UK10 175 aa13.45□□□□□ -0.26
Trim54-201ENSMUST00000013771 SbsnQ8CIT9 700 aa13.45□□□□□ -0.26
Trim54-201ENSMUST00000013771 Olfr135Q8VEY4 312 aa13.45□□□□□ -0.26
Trim54-201ENSMUST00000013771 Olfr123Q8VFQ1 309 aa13.45□□□□□ -0.26
Trim54-201ENSMUST00000013771 Tex43Q9D9I1 141 aa13.45□□□□□ -0.26
Trim54-201ENSMUST00000013771 Rcl1Q9JJT0 373 aaKnown RBP13.45□□□□□ -0.26
Trim54-201ENSMUST00000013771 Mixl1Q9WUI0 231 aa13.45□□□□□ -0.26
Trim54-201ENSMUST00000013771 Cldn15Q9Z0S5 227 aa13.45□□□□□ -0.26
Trim54-201ENSMUST00000013771 Gm45716A0A1B0GRQ0 93 aa13.44□□□□□ -0.26
Trim54-201ENSMUST00000013771 Lynx1P0DP60 116 aa13.44□□□□□ -0.26
Trim54-201ENSMUST00000013771 Fgf2P15655 154 aa13.44□□□□□ -0.26
Trim54-201ENSMUST00000013771 Rab3dP35276 219 aa13.44□□□□□ -0.26
Trim54-201ENSMUST00000013771 Rnd3P61588 244 aa13.44□□□□□ -0.26
Trim54-201ENSMUST00000013771 Pax5Q02650 391 aa13.44□□□□□ -0.26
Trim54-201ENSMUST00000013771 Rbp2Q08652 134 aa13.44□□□□□ -0.26
Trim54-201ENSMUST00000013771 Mob4Q6PEB6 225 aa13.44□□□□□ -0.26
Trim54-201ENSMUST00000013771 Ankrd33Q8BXP5 385 aa13.44□□□□□ -0.26
Trim54-201ENSMUST00000013771 Vrk3Q8K3G5 453 aa13.44□□□□□ -0.26
Trim54-201ENSMUST00000013771 Vmn1r229Q8R2A9 306 aa13.44□□□□□ -0.26
Trim54-201ENSMUST00000013771 Olfr1228Q8VGM9 323 aa13.44□□□□□ -0.26
Trim54-201ENSMUST00000013771 H1fooQ8VIK3 304 aa13.44□□□□□ -0.26
Trim54-201ENSMUST00000013771 Ap4m1Q9JKC7 449 aa13.44□□□□□ -0.26
Trim54-201ENSMUST00000013771 Gm4707V9GXN5 68 aa13.44□□□□□ -0.26
Trim54-201ENSMUST00000013771 Notch1Q01705 2531 aa13.43□□□□□ -0.26
Trim54-201ENSMUST00000013771 Olfr685A0A1L1SVG7 331 aa13.43□□□□□ -0.26
Trim54-201ENSMUST00000013771 Vmn2r83E9Q0G7 864 aa13.43□□□□□ -0.26
Trim54-201ENSMUST00000013771 Ercc1P07903 298 aa13.43□□□□□ -0.26
Trim54-201ENSMUST00000013771 Gpr160Q3U3F9 336 aa13.43□□□□□ -0.26
Trim54-201ENSMUST00000013771 Arg1Q61176 323 aa13.43□□□□□ -0.26
Trim54-201ENSMUST00000013771 CenpxQ8C4X1 78 aa13.43□□□□□ -0.26
Trim54-201ENSMUST00000013771 Dctn4Q8CBY8 467 aa13.43□□□□□ -0.26
Trim54-201ENSMUST00000013771 Mef2cQ8CFN5 474 aa13.43□□□□□ -0.26
Trim54-201ENSMUST00000013771 OtosQ8R448 89 aa13.43□□□□□ -0.26
Trim54-201ENSMUST00000013771 Tlcd2Q8VC26 310 aa13.43□□□□□ -0.26
Trim54-201ENSMUST00000013771 Olfr38Q8VGP4 317 aa13.43□□□□□ -0.26
Trim54-201ENSMUST00000013771 Tex36Q9D5N9 219 aa13.43□□□□□ -0.26
Trim54-201ENSMUST00000013771 9530002B09RikQ9EPV7 135 aa13.43□□□□□ -0.26
Trim54-201ENSMUST00000013771 Bin3Q9JI08 253 aa13.43□□□□□ -0.26
Trim54-201ENSMUST00000013771 Nat8Q9JIY7 227 aa13.43□□□□□ -0.26
Trim54-201ENSMUST00000013771 Gm28285A0A087WQ54 102 aa13.42□□□□□ -0.26
Trim54-201ENSMUST00000013771 Fam98cE9PYD1 344 aa13.42□□□□□ -0.26
Trim54-201ENSMUST00000013771 Olfr92L7N475 312 aa13.42□□□□□ -0.26
Trim54-201ENSMUST00000013771 Cxcl1P12850 96 aa13.42□□□□□ -0.26
Trim54-201ENSMUST00000013771 Hes1P35428 282 aa13.42□□□□□ -0.26
Trim54-201ENSMUST00000013771 H2-DMb2Q31099 261 aa13.42□□□□□ -0.26
Trim54-201ENSMUST00000013771 Ewsr1Q61545 655 aaKnown RBP13.42□□□□□ -0.26
Trim54-201ENSMUST00000013771 Gpr137Q80ZU9 396 aa13.42□□□□□ -0.26
Trim54-201ENSMUST00000013771 Ifna16Q810G1 189 aa13.42□□□□□ -0.26
Trim54-201ENSMUST00000013771 Ankrd55Q8BLD6 626 aa13.42□□□□□ -0.26
Trim54-201ENSMUST00000013771 Nhlrc1Q8BR37 401 aa13.42□□□□□ -0.26
Trim54-201ENSMUST00000013771 Scrt2Q8BTH6 311 aa13.42□□□□□ -0.26
Trim54-201ENSMUST00000013771 Rnf182Q8C432 247 aa13.42□□□□□ -0.26
Trim54-201ENSMUST00000013771 Dcun1d4Q8CCA0 292 aa13.42□□□□□ -0.26
Trim54-201ENSMUST00000013771 Il34Q8R1R4 235 aa13.42□□□□□ -0.26
Trim54-201ENSMUST00000013771 Olfr720Q8VF37 316 aa13.42□□□□□ -0.26
Trim54-201ENSMUST00000013771 Olfr1151Q8VFQ8 308 aa13.42□□□□□ -0.26
Trim54-201ENSMUST00000013771 Dnajc24Q91ZF0 196 aa13.42□□□□□ -0.26
Trim54-201ENSMUST00000013771 Tomm40lQ9CZR3 308 aa13.42□□□□□ -0.26
Trim54-201ENSMUST00000013771 Cd200r1Q9ES57 326 aa13.42□□□□□ -0.26
Trim54-201ENSMUST00000013771 Ntn3Q9R1A3 580 aa13.42□□□□□ -0.26
Trim54-201ENSMUST00000013771 Timm23Q9WTQ8 209 aa13.42□□□□□ -0.26
Trim54-201ENSMUST00000013771 Ighv1-26A0A075B5V0 117 aa13.41□□□□□ -0.26
Trim54-201ENSMUST00000013771 Trbv29A0A0G2LB96 114 aa13.41□□□□□ -0.26
Trim54-201ENSMUST00000013771 Gm16368A0A1Y7VNG9 144 aa13.41□□□□□ -0.26
Trim54-201ENSMUST00000013771 Gm6594J3QM43 95 aa13.41□□□□□ -0.26
Trim54-201ENSMUST00000013771 Rnase1P00683 149 aa13.41□□□□□ -0.26
Trim54-201ENSMUST00000013771 Mfge8P21956 463 aaKnown RBP13.41□□□□□ -0.26
Trim54-201ENSMUST00000013771 Rab7aP51150 207 aaKnown RBP13.41□□□□□ -0.26
Trim54-201ENSMUST00000013771 Eif5aP63242 154 aaKnown RBP13.41□□□□□ -0.26
Trim54-201ENSMUST00000013771 Olfr147Q60886 317 aa13.41□□□□□ -0.26
Trim54-201ENSMUST00000013771 Olfr1350Q8VF34 308 aa13.41□□□□□ -0.26
Trim54-201ENSMUST00000013771 Tmem189Q99LQ7 271 aa13.41□□□□□ -0.26
Trim54-201ENSMUST00000013771 Ube2j1Q9JJZ4 318 aa13.41□□□□□ -0.26
Trim54-201ENSMUST00000013771 St6galnac5Q9QYJ1 336 aa13.41□□□□□ -0.26
Trim54-201ENSMUST00000013771 Timm9Q9WV98 89 aaKnown RBP13.41□□□□□ -0.26
Trim54-201ENSMUST00000013771 NppaP05125 152 aa13.4□□□□□ -0.26
Trim54-201ENSMUST00000013771 FblP35550 327 aaKnown RBP13.4□□□□□ -0.26
Trim54-201ENSMUST00000013771 Cd27P41272 250 aa13.4□□□□□ -0.26
Trim54-201ENSMUST00000013771 Slc25a4P48962 298 aaKnown RBP13.4□□□□□ -0.26
Trim54-201ENSMUST00000013771 Olfr1383Q7TQT2 311 aa13.4□□□□□ -0.26
Trim54-201ENSMUST00000013771 Olfr1000Q7TR99 314 aa13.4□□□□□ -0.26
Trim54-201ENSMUST00000013771 Olfr917Q7TRC3 309 aa13.4□□□□□ -0.26
Trim54-201ENSMUST00000013771 Ahsa1Q8BK64 338 aa13.4□□□□□ -0.26
Trim54-201ENSMUST00000013771 Rnf170Q8CBG9 286 aa13.4□□□□□ -0.26
Trim54-201ENSMUST00000013771 Vmn1r235Q8R297 328 aa13.4□□□□□ -0.26
Trim54-201ENSMUST00000013771 Cacng8Q8VHW2 423 aa13.4□□□□□ -0.26
Trim54-201ENSMUST00000013771 Msmo1Q9CRA4 293 aa13.4□□□□□ -0.26
Trim54-201ENSMUST00000013771 1700025C18RikA2A580 89 aa13.39□□□□□ -0.27
Trim54-201ENSMUST00000013771 Gm11756A2BEJ1 356 aa13.39□□□□□ -0.27
Trim54-201ENSMUST00000013771 Pm20d2A3KG59 431 aa13.39□□□□□ -0.27
Trim54-201ENSMUST00000013771 P01658 132 aa13.39□□□□□ -0.27
Trim54-201ENSMUST00000013771 Hoxb5P09079 269 aa13.39□□□□□ -0.27
Trim54-201ENSMUST00000013771 Cd81P35762 236 aa13.39□□□□□ -0.27
Trim54-201ENSMUST00000013771 Gabrr1P56475 480 aa13.39□□□□□ -0.27
Trim54-201ENSMUST00000013771 PkiaP63248 76 aa13.39□□□□□ -0.27
Trim54-201ENSMUST00000013771 Fndc4Q3TR08 231 aa13.39□□□□□ -0.27
Trim54-201ENSMUST00000013771 Spint3Q3UW09 88 aa13.39□□□□□ -0.27
Trim54-201ENSMUST00000013771 Gm21943Q5FWD5 227 aa13.39□□□□□ -0.27
Trim54-201ENSMUST00000013771 Trdv4Q5R1A3 115 aa13.39□□□□□ -0.27
Trim54-201ENSMUST00000013771 Plk3Q60806 631 aa13.39□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 33.5 ms