RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 PYGO2Q9BRQ0 406 aa8.32□□□□□ -1.08
SMAD1-216ENST00000515527 PARD6GQ9BYG4 376 aaPredicted RBP8.32□□□□□ -1.08
SMAD1-216ENST00000515527 SLC25A22Q9H936 323 aa8.32□□□□□ -1.08
SMAD1-216ENST00000515527 KLF12Q9Y4X4 402 aa8.32□□□□□ -1.08
SMAD1-216ENST00000515527 IGKV2D-24A0A075B6R9 120 aa8.31□□□□□ -1.08
SMAD1-216ENST00000515527 IGKV1OR2-108A0A075B7D4 117 aa8.31□□□□□ -1.08
SMAD1-216ENST00000515527 IRGMA1A4Y4 181 aa8.31□□□□□ -1.08
SMAD1-216ENST00000515527 METTL21EPA6NDL7 271 aa8.31□□□□□ -1.08
SMAD1-216ENST00000515527 H7C1H1 209 aa8.31□□□□□ -1.08
SMAD1-216ENST00000515527 TAAR5O14804 337 aa8.31□□□□□ -1.08
SMAD1-216ENST00000515527 NXPH3O95157 252 aa8.31□□□□□ -1.08
SMAD1-216ENST00000515527 RANBP1P43487 201 aa8.31□□□□□ -1.08
SMAD1-216ENST00000515527 IZUMO4Q1ZYL8 232 aa8.31□□□□□ -1.08
SMAD1-216ENST00000515527 C14orf177Q52M58 125 aa8.31□□□□□ -1.08
SMAD1-216ENST00000515527 TOR2AQ5JU69 321 aa8.31□□□□□ -1.08
SMAD1-216ENST00000515527 SH2D6Q7Z4S9 175 aa8.31□□□□□ -1.08
SMAD1-216ENST00000515527 C11orf72Q8NBR9 251 aa8.31□□□□□ -1.08
SMAD1-216ENST00000515527 PDCD10Q9BUL8 212 aa8.31□□□□□ -1.08
SMAD1-216ENST00000515527 FAM107BQ9H098 131 aa8.31□□□□□ -1.08
SMAD1-216ENST00000515527 SLC25A32Q9H2D1 315 aa8.31□□□□□ -1.08
SMAD1-216ENST00000515527 TRAV12-3A0A0B4J271 114 aa8.3□□□□□ -1.08
SMAD1-216ENST00000515527 UCHL1P09936 223 aa8.3□□□□□ -1.08
SMAD1-216ENST00000515527 HERV-K104P61576 105 aa8.3□□□□□ -1.08
SMAD1-216ENST00000515527 RPS25P62851 125 aaKnown RBP8.3□□□□□ -1.08
SMAD1-216ENST00000515527 PRR3P79522 188 aaKnown RBP8.3□□□□□ -1.08
SMAD1-216ENST00000515527 Q8N3U1 123 aa8.3□□□□□ -1.08
SMAD1-216ENST00000515527 APH1BQ8WW43 257 aa8.3□□□□□ -1.08
SMAD1-216ENST00000515527 FAM231BA6NCW3 169 aa8.29□□□□□ -1.08
SMAD1-216ENST00000515527 SFTA3P0C7M3 94 aa8.29□□□□□ -1.08
SMAD1-216ENST00000515527 NAT1P18440 290 aa8.29□□□□□ -1.08
SMAD1-216ENST00000515527 HTR2BP41595 481 aa8.29□□□□□ -1.08
SMAD1-216ENST00000515527 GNG2P59768 71 aa8.29□□□□□ -1.08
SMAD1-216ENST00000515527 ZBTB8BQ8NAP8 495 aaPredicted RBP8.29□□□□□ -1.08
SMAD1-216ENST00000515527 MRGPRFQ96AM1 343 aa8.29□□□□□ -1.08
SMAD1-216ENST00000515527 TMEM80Q96HE8 168 aa8.29□□□□□ -1.08
SMAD1-216ENST00000515527 LOC100131303A0A0U1RQF7 123 aa8.28□□□□□ -1.08
SMAD1-216ENST00000515527 GGTLC3B5MD39 225 aa8.28□□□□□ -1.08
SMAD1-216ENST00000515527 ETFRF1Q6IPR1 90 aa8.28□□□□□ -1.08
SMAD1-216ENST00000515527 C10orf67Q8IYJ2 551 aa8.28□□□□□ -1.08
SMAD1-216ENST00000515527 ARRDC1Q8N5I2 433 aa8.28□□□□□ -1.08
SMAD1-216ENST00000515527 BEST4Q8NFU0 473 aa8.28□□□□□ -1.08
SMAD1-216ENST00000515527 ATG5Q9H1Y0 275 aa8.28□□□□□ -1.08
SMAD1-216ENST00000515527 RRP15Q9Y3B9 282 aaKnown RBP8.28□□□□□ -1.08
SMAD1-216ENST00000515527 A0A087WYN8 130 aa8.27□□□□□ -1.09
SMAD1-216ENST00000515527 CLEC2LP0C7M8 214 aa8.27□□□□□ -1.09
SMAD1-216ENST00000515527 TCL1AP56279 114 aa8.27□□□□□ -1.09
SMAD1-216ENST00000515527 BSXQ3C1V8 233 aa8.27□□□□□ -1.09
SMAD1-216ENST00000515527 DAZ4Q86SG3 579 aaKnown RBP8.27□□□□□ -1.09
SMAD1-216ENST00000515527 C9orf163Q8N9P6 203 aa8.27□□□□□ -1.09
SMAD1-216ENST00000515527 CCDC90BQ9GZT6 254 aa8.27□□□□□ -1.09
SMAD1-216ENST00000515527 DAZ3Q9NR90 486 aaKnown RBP8.27□□□□□ -1.09
SMAD1-216ENST00000515527 PSORS1C1Q9UIG5 152 aa8.27□□□□□ -1.09
SMAD1-216ENST00000515527 EFCAB10A6NFE3 127 aa8.26□□□□□ -1.09
SMAD1-216ENST00000515527 SSX5O60225 188 aa8.26□□□□□ -1.09
SMAD1-216ENST00000515527 ATG12O94817 140 aa8.26□□□□□ -1.09
SMAD1-216ENST00000515527 IGKV1-39P01597 117 aa8.26□□□□□ -1.09
SMAD1-216ENST00000515527 IGKV1D-39P04432 117 aa8.26□□□□□ -1.09
SMAD1-216ENST00000515527 RAB6AP20340 208 aa8.26□□□□□ -1.09
SMAD1-216ENST00000515527 PSMA1P25786 263 aaKnown RBP8.26□□□□□ -1.09
SMAD1-216ENST00000515527 HRH1P35367 487 aa8.26□□□□□ -1.09
SMAD1-216ENST00000515527 ZNF90Q03938 601 aa8.26□□□□□ -1.09
SMAD1-216ENST00000515527 IQCF2Q8IXL9 164 aa8.26□□□□□ -1.09
SMAD1-216ENST00000515527 RNASEH2CQ8TDP1 164 aaKnown RBP8.26□□□□□ -1.09
SMAD1-216ENST00000515527 GTSF1Q8WW33 167 aa8.26□□□□□ -1.09
SMAD1-216ENST00000515527 CENPNQ96H22 339 aaPredicted RBP8.26□□□□□ -1.09
SMAD1-216ENST00000515527 ZNF479Q96JC4 524 aa8.26□□□□□ -1.09
SMAD1-216ENST00000515527 POMPQ9Y244 141 aa8.26□□□□□ -1.09
SMAD1-216ENST00000515527 V9GY05 133 aa8.26□□□□□ -1.09
SMAD1-216ENST00000515527 ZFP92A6NM28 416 aa8.25□□□□□ -1.09
SMAD1-216ENST00000515527 EI24O14681 340 aa8.25□□□□□ -1.09
SMAD1-216ENST00000515527 MYL12BO14950 172 aa8.25□□□□□ -1.09
SMAD1-216ENST00000515527 WBP4O75554 376 aaKnown RBP8.25□□□□□ -1.09
SMAD1-216ENST00000515527 STEAP1BQ6NZ63 245 aa8.25□□□□□ -1.09
SMAD1-216ENST00000515527 DPPA3Q6W0C5 159 aa8.25□□□□□ -1.09
SMAD1-216ENST00000515527 SDIM1Q6ZPB5 146 aa8.25□□□□□ -1.09
SMAD1-216ENST00000515527 RPUSD4Q96CM3 377 aaKnown RBP8.25□□□□□ -1.09
SMAD1-216ENST00000515527 SLC35E1Q96K37 410 aa8.25□□□□□ -1.09
SMAD1-216ENST00000515527 AP4S1Q9Y587 144 aa8.25□□□□□ -1.09
SMAD1-216ENST00000515527 TMEM56-RWDD3S4R434 201 aa8.25□□□□□ -1.09
SMAD1-216ENST00000515527 SNRPGP15A8MWD9 76 aa8.24□□□□□ -1.09
SMAD1-216ENST00000515527 CCSO14618 274 aa8.24□□□□□ -1.09
SMAD1-216ENST00000515527 FCGR1AP12314 374 aa8.24□□□□□ -1.09
SMAD1-216ENST00000515527 CIRBPQ14011 172 aaKnown RBP8.24□□□□□ -1.09
SMAD1-216ENST00000515527 CXCL3P19876 107 aa8.23□□□□□ -1.09
SMAD1-216ENST00000515527 EIF4E3Q8N5X7 224 aaKnown RBP8.23□□□□□ -1.09
SMAD1-216ENST00000515527 RNF185Q96GF1 192 aa8.23□□□□□ -1.09
SMAD1-216ENST00000515527 DNAJC30Q96LL9 226 aa8.23□□□□□ -1.09
SMAD1-216ENST00000515527 GPR82Q96P67 336 aa8.23□□□□□ -1.09
SMAD1-216ENST00000515527 PSORS1C2Q9UIG4 136 aa8.23□□□□□ -1.09
SMAD1-216ENST00000515527 GPR31O00270 319 aa8.22□□□□□ -1.09
SMAD1-216ENST00000515527 CALB2P22676 271 aa8.22□□□□□ -1.09
SMAD1-216ENST00000515527 TAS2R20P59543 309 aa8.22□□□□□ -1.09
SMAD1-216ENST00000515527 KLF9Q13886 244 aaPredicted RBP8.22□□□□□ -1.09
SMAD1-216ENST00000515527 PHLDA2Q53GA4 152 aa8.22□□□□□ -1.09
SMAD1-216ENST00000515527 C2orf83Q53S99 150 aa8.22□□□□□ -1.09
SMAD1-216ENST00000515527 DGAT2L7PQ6IED9 249 aa8.22□□□□□ -1.09
SMAD1-216ENST00000515527 OR4D5Q8NGN0 318 aa8.22□□□□□ -1.09
SMAD1-216ENST00000515527 LRRC20Q8TCA0 184 aa8.22□□□□□ -1.09
SMAD1-216ENST00000515527 HEYLQ9NQ87 328 aaPredicted RBP8.22□□□□□ -1.09
SMAD1-216ENST00000515527 TEX13DA0A0J9YY54 714 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms