RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 TRGV4A0A0C4DH28 118 aa5.52□□□□□ -1.53
GARNL3-219ENST00000495172 SPINK4O60575 86 aa5.52□□□□□ -1.53
GARNL3-219ENST00000495172 PITX3O75364 302 aa5.52□□□□□ -1.53
GARNL3-219ENST00000495172 GADD45AP24522 165 aa5.52□□□□□ -1.53
GARNL3-219ENST00000495172 PPT1P50897 306 aa5.52□□□□□ -1.53
GARNL3-219ENST00000495172 OR2F1Q13607 317 aa5.52□□□□□ -1.53
GARNL3-219ENST00000495172 REG3GQ6UW15 175 aa5.52□□□□□ -1.53
GARNL3-219ENST00000495172 H2BFWTQ7Z2G1 175 aa5.52□□□□□ -1.53
GARNL3-219ENST00000495172 MS4A15Q8N5U1 240 aa5.52□□□□□ -1.53
GARNL3-219ENST00000495172 ZBTB34Q8NCN2 500 aa5.52□□□□□ -1.53
GARNL3-219ENST00000495172 AP5S1Q9NUS5 200 aa5.52□□□□□ -1.53
GARNL3-219ENST00000495172 TP53TG3Q9ULZ0 132 aa5.52□□□□□ -1.53
GARNL3-219ENST00000495172 USH2AO75445 5202 aa5.52□□□□□ -1.53
GARNL3-219ENST00000495172 IGKV2D-24A0A075B6R9 120 aa5.51□□□□□ -1.53
GARNL3-219ENST00000495172 A0A087WYN8 130 aa5.51□□□□□ -1.53
GARNL3-219ENST00000495172 LINC00854A0A1B0GVQ3 168 aa5.51□□□□□ -1.53
GARNL3-219ENST00000495172 H7C1H1 209 aa5.51□□□□□ -1.53
GARNL3-219ENST00000495172 EI24O14681 340 aa5.51□□□□□ -1.53
GARNL3-219ENST00000495172 SCGB2A1O75556 95 aa5.51□□□□□ -1.53
GARNL3-219ENST00000495172 MYL12AP19105 171 aa5.51□□□□□ -1.53
GARNL3-219ENST00000495172 RPL5P46777 297 aaKnown RBP5.51□□□□□ -1.53
GARNL3-219ENST00000495172 OR10A3P58181 314 aa5.51□□□□□ -1.53
GARNL3-219ENST00000495172 LAGE3Q14657 143 aa5.51□□□□□ -1.53
GARNL3-219ENST00000495172 MSMO1Q15800 293 aa5.51□□□□□ -1.53
GARNL3-219ENST00000495172 CCDC190Q86UF4 302 aa5.51□□□□□ -1.53
GARNL3-219ENST00000495172 NHLRC2Q8NBF2 726 aa5.51□□□□□ -1.53
GARNL3-219ENST00000495172 TMEM170AQ8WVE7 144 aa5.51□□□□□ -1.53
GARNL3-219ENST00000495172 PCNPQ8WW12 178 aaKnown RBP5.51□□□□□ -1.53
GARNL3-219ENST00000495172 TSC22D3Q99576 134 aa5.51□□□□□ -1.53
GARNL3-219ENST00000495172 SLC25A31Q9H0C2 315 aa5.51□□□□□ -1.53
GARNL3-219ENST00000495172 DIMT1Q9UNQ2 313 aaKnown RBP5.51□□□□□ -1.53
GARNL3-219ENST00000495172 FCGBPQ9Y6R7 5405 aaPredicted RBP5.5□□□□□ -1.53
GARNL3-219ENST00000495172 CORTO00230 105 aa5.5□□□□□ -1.53
GARNL3-219ENST00000495172 UCHL1P09936 223 aa5.5□□□□□ -1.53
GARNL3-219ENST00000495172 SCAND1P57086 179 aa5.5□□□□□ -1.53
GARNL3-219ENST00000495172 ARPC4P59998 168 aa5.5□□□□□ -1.53
GARNL3-219ENST00000495172 PHLDA2Q53GA4 152 aa5.5□□□□□ -1.53
GARNL3-219ENST00000495172 SDIM1Q6ZPB5 146 aa5.5□□□□□ -1.53
GARNL3-219ENST00000495172 Q6ZQT7 251 aa5.5□□□□□ -1.53
GARNL3-219ENST00000495172 ATP6V0E2Q8NHE4 81 aa5.5□□□□□ -1.53
GARNL3-219ENST00000495172 DPH3Q96FX2 82 aa5.5□□□□□ -1.53
GARNL3-219ENST00000495172 ATG5Q9H1Y0 275 aa5.5□□□□□ -1.53
GARNL3-219ENST00000495172 POMPQ9Y244 141 aa5.5□□□□□ -1.53
GARNL3-219ENST00000495172 TRAV8-6A0A0B4J262 113 aa5.49□□□□□ -1.53
GARNL3-219ENST00000495172 MUC21A0A0G2JKD1 596 aa5.49□□□□□ -1.53
GARNL3-219ENST00000495172 PRAC2D3DTV9 90 aa5.49□□□□□ -1.53
GARNL3-219ENST00000495172 SNRPCP09234 159 aaKnown RBP5.49□□□□□ -1.53
GARNL3-219ENST00000495172 SUB1P53999 127 aaKnown RBP eCLIP5.49□□□□□ -1.53
GARNL3-219ENST00000495172 LINC01547P58512 204 aaPredicted RBP5.49□□□□□ -1.53
GARNL3-219ENST00000495172 BSXQ3C1V8 233 aa5.49□□□□□ -1.53
GARNL3-219ENST00000495172 C1orf194Q5T5A4 169 aa5.49□□□□□ -1.53
GARNL3-219ENST00000495172 OR8G2PQ6IF36 304 aa5.49□□□□□ -1.53
GARNL3-219ENST00000495172 GTSF1Q8WW33 167 aa5.49□□□□□ -1.53
GARNL3-219ENST00000495172 LINC00477Q96M19 166 aa5.49□□□□□ -1.53
GARNL3-219ENST00000495172 VGLL1Q99990 258 aa5.49□□□□□ -1.53
GARNL3-219ENST00000495172 TXNDC17Q9BRA2 123 aa5.49□□□□□ -1.53
GARNL3-219ENST00000495172 CENPOQ9BU64 300 aa5.49□□□□□ -1.53
GARNL3-219ENST00000495172 IGKV1D-37A0A075B6S9 117 aa5.48□□□□□ -1.53
GARNL3-219ENST00000495172 IGHV3-16A0A0C4DH30 117 aa5.48□□□□□ -1.53
GARNL3-219ENST00000495172 ATG12O94817 140 aa5.48□□□□□ -1.53
GARNL3-219ENST00000495172 IGKV1-5P01602 117 aa5.48□□□□□ -1.53
GARNL3-219ENST00000495172 HRH1P35367 487 aa5.48□□□□□ -1.53
GARNL3-219ENST00000495172 GALR1P47211 349 aa5.48□□□□□ -1.53
GARNL3-219ENST00000495172 MEOX2P50222 304 aa5.48□□□□□ -1.53
GARNL3-219ENST00000495172 TMEM91Q6ZNR0 172 aa5.48□□□□□ -1.53
GARNL3-219ENST00000495172 PRR26Q8N8Z3 221 aa5.48□□□□□ -1.53
GARNL3-219ENST00000495172 BEST4Q8NFU0 473 aa5.48□□□□□ -1.53
GARNL3-219ENST00000495172 TMEM80Q96HE8 168 aa5.48□□□□□ -1.53
GARNL3-219ENST00000495172 TRAV8-3A0A0A6YYJ7 113 aa5.47□□□□□ -1.53
GARNL3-219ENST00000495172 TEX13DA0A0J9YY54 714 aaPredicted RBP5.47□□□□□ -1.53
GARNL3-219ENST00000495172 MEIS3P1A6NDR6 274 aa5.47□□□□□ -1.53
GARNL3-219ENST00000495172 CD1AP06126 327 aa5.47□□□□□ -1.53
GARNL3-219ENST00000495172 PRSS1P07477 247 aa5.47□□□□□ -1.53
GARNL3-219ENST00000495172 HOXB6P17509 224 aaKnown RBP5.47□□□□□ -1.53
GARNL3-219ENST00000495172 NAT1P18440 290 aa5.47□□□□□ -1.53
GARNL3-219ENST00000495172 SLAQ13239 276 aa5.47□□□□□ -1.53
GARNL3-219ENST00000495172 SRSF9Q13242 221 aaKnown RBP eCLIP5.47□□□□□ -1.53
GARNL3-219ENST00000495172 SPINK6Q6UWN8 80 aa5.47□□□□□ -1.53
GARNL3-219ENST00000495172 RPUSD4Q96CM3 377 aaKnown RBP5.47□□□□□ -1.53
GARNL3-219ENST00000495172 ZC2HC1AQ96GY0 325 aa5.47□□□□□ -1.53
GARNL3-219ENST00000495172 FXYD6Q9H0Q3 95 aa5.47□□□□□ -1.53
GARNL3-219ENST00000495172 PSORS1C1Q9UIG5 152 aa5.47□□□□□ -1.53
GARNL3-219ENST00000495172 DAPK2Q9UIK4 370 aa5.47□□□□□ -1.53
GARNL3-219ENST00000495172 A0A0G2JRQ6 117 aa5.46□□□□□ -1.54
GARNL3-219ENST00000495172 SMIM30A4D0T7 59 aa5.46□□□□□ -1.54
GARNL3-219ENST00000495172 INS-IGF2F8WCM5 200 aa5.46□□□□□ -1.54
GARNL3-219ENST00000495172 CXCL3P19876 107 aa5.46□□□□□ -1.54
GARNL3-219ENST00000495172 PSMB9P28065 219 aa5.46□□□□□ -1.54
GARNL3-219ENST00000495172 NUP62P37198 522 aaPredicted RBP5.46□□□□□ -1.54
GARNL3-219ENST00000495172 HTR2BP41595 481 aa5.46□□□□□ -1.54
GARNL3-219ENST00000495172 CBX5P45973 191 aa5.46□□□□□ -1.54
GARNL3-219ENST00000495172 TCL1AP56279 114 aa5.46□□□□□ -1.54
GARNL3-219ENST00000495172 GNG2P59768 71 aa5.46□□□□□ -1.54
GARNL3-219ENST00000495172 RPS25P62851 125 aaKnown RBP5.46□□□□□ -1.54
GARNL3-219ENST00000495172 CIRBPQ14011 172 aaKnown RBP5.46□□□□□ -1.54
GARNL3-219ENST00000495172 TEPPQ6URK8 271 aa5.46□□□□□ -1.54
GARNL3-219ENST00000495172 C9orf163Q8N9P6 203 aa5.46□□□□□ -1.54
GARNL3-219ENST00000495172 LYPD6BQ8NI32 183 aa5.46□□□□□ -1.54
GARNL3-219ENST00000495172 ZNF431Q8TF32 576 aaPredicted RBP5.46□□□□□ -1.54
GARNL3-219ENST00000495172 AP4S1Q9Y587 144 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms