RNA–Protein interactions for RNA: ENST00000493537.5

SUPT20H-221, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 2,149 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-221ENST00000493537 INSL5Q9Y5Q6 135 aa3.46□□□□□ -1.86
SUPT20H-221ENST00000493537 C2orf16Q68DN1 1984 aa3.46□□□□□ -1.86
SUPT20H-221ENST00000493537 IGHV3OR16-12A0A075B7B8 117 aa3.45□□□□□ -1.86
SUPT20H-221ENST00000493537 A0A1W2PPM0 123 aa3.45□□□□□ -1.86
SUPT20H-221ENST00000493537 J3QRE1 110 aa3.45□□□□□ -1.86
SUPT20H-221ENST00000493537 GYPBP06028 91 aa3.45□□□□□ -1.86
SUPT20H-221ENST00000493537 FRMD6-AS1P0C7T7 363 aa3.45□□□□□ -1.86
SUPT20H-221ENST00000493537 COX7CP15954 63 aa3.45□□□□□ -1.86
SUPT20H-221ENST00000493537 S100A3P33764 101 aa3.45□□□□□ -1.86
SUPT20H-221ENST00000493537 LINC00313P59037 77 aa3.45□□□□□ -1.86
SUPT20H-221ENST00000493537 HBBP68871 147 aa3.45□□□□□ -1.86
SUPT20H-221ENST00000493537 PMCHL1Q16048 86 aa3.45□□□□□ -1.86
SUPT20H-221ENST00000493537 LINC00303Q3SY05 128 aa3.45□□□□□ -1.86
SUPT20H-221ENST00000493537 MUC21Q5SSG8 566 aa3.45□□□□□ -1.86
SUPT20H-221ENST00000493537 ZNF329Q86UD4 541 aa3.45□□□□□ -1.86
SUPT20H-221ENST00000493537 APCDD1LQ8NCL9 501 aa3.45□□□□□ -1.86
SUPT20H-221ENST00000493537 H1FXQ92522 213 aaKnown RBP3.45□□□□□ -1.86
SUPT20H-221ENST00000493537 MSRB1Q9NZV6 116 aa3.45□□□□□ -1.86
SUPT20H-221ENST00000493537 MOB4Q9Y3A3 225 aa3.45□□□□□ -1.86
SUPT20H-221ENST00000493537 NINQ8N4C6 2090 aa3.45□□□□□ -1.86
SUPT20H-221ENST00000493537 TRGV5A0A0B4J1U4 118 aa3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 GRIFINA4D1Z8 144 aa3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 FAM181BA6NEQ2 426 aa3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 ZFP92A6NM28 416 aa3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 CXCL1P09341 107 aa3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 NPC2P61916 151 aa3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 RBMY1FQ15415 496 aaKnown RBP3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 VGLL1Q99990 258 aa3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 C20orf78Q9BR46 151 aa3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 HDHD3Q9BSH5 251 aaPredicted RBP3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 SMDT1Q9H4I9 107 aa3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 PLEKHF2Q9H8W4 249 aa3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 CYTL1Q9NRR1 136 aa3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 SLC25A15Q9Y619 301 aa3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 THSD7AQ9UPZ6 1657 aa3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 NUP214P35658 2090 aaPredicted RBP3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 SCN1AP35498 2009 aa3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 NYNRINQ9P2P1 1898 aaKnown RBP3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 ZNF860A6NHJ4 632 aa3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 TMEM256-PLSCR3K7ERE1 68 aa3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 SSSCA1O60232 199 aa3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 LINC00271P0C7V0 271 aa3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 SNRPD3P62318 126 aaKnown RBP3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 GNB2P62879 340 aa3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 CDK5R1Q15078 307 aa3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 ELOBQ15370 118 aa3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 C1orf100Q5SVJ3 147 aa3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 STPG1Q5TH74 334 aa3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 EBLN2Q6P2I7 272 aa3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 PHF5AQ7RTV0 110 aaKnown RBP3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 OR5H2Q8NGV7 314 aa3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 PYGO2Q9BRQ0 406 aa3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 SLC35B3Q9H1N7 401 aa3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 SLC25A22Q9H936 323 aa3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 DYSFO75923 2080 aa3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 MYO10Q9HD67 2058 aa3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 PLXNA3P51805 1871 aa3.44□□□□□ -1.86
SUPT20H-221ENST00000493537 TRBV24-1A0A075B6N3 115 aa3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 IGHV4-61A0A0C4DH41 118 aa3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 IGKV1-8A0A0C4DH67 115 aa3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 PATE3B3GLJ2 98 aa3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 IGLV3-27P01718 113 aa3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 IGHV4-59P01825 116 aa3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 HLA-DMBP28068 263 aa3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 ZNF138P52744 262 aa3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 SYNJ2BPP57105 145 aa3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 ERVK-16P61578 105 aa3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 RPL38P63173 70 aaKnown RBP3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 MRPS36P82909 103 aaKnown RBP3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 SSBP1Q04837 148 aaKnown RBP3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 LINC00173Q6ZV60 143 aa3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 PCP2Q8IVA1 136 aa3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 OR8A1Q8NGG7 326 aa3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 TAF15Q92804 592 aaKnown RBP eCLIP3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 LSM10Q969L4 123 aaKnown RBP3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 PRELID3AQ96N28 172 aa3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 TMEM243Q9BU79 118 aa3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 TMEM242Q9NWH2 141 aa3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 DKK2Q9UBU2 259 aa3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 BPTFQ12830 3046 aa3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 CCDC88CQ9P219 2028 aa3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 RBAKDNA6NC62 111 aa3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 NXPH4O95158 308 aa3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 IGLL1P15814 213 aa3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 ZNF80P51504 273 aaPredicted RBP3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 LGALS9CQ6DKI2 356 aa3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 ZNF322Q6U7Q0 402 aaPredicted RBP3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 ZNF101Q8IZC7 436 aa3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 NKAPP1Q8N9T2 125 aa3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 SMRP1Q8NCR6 262 aa3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 PPDPFLQ8WWR9 84 aa3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 C11orf52Q96A22 123 aa3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 PMCHL2Q9BQD1 86 aa3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 ZNF702PQ9H963 129 aa3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 GREB1Q4ZG55 1949 aa3.43□□□□□ -1.86
SUPT20H-221ENST00000493537 BRWD3Q6RI45 1802 aa3.42□□□□□ -1.86
SUPT20H-221ENST00000493537 IGKV1-27A0A075B6S5 117 aa3.42□□□□□ -1.86
SUPT20H-221ENST00000493537 IGLV5-45A0A087WSX0 123 aa3.42□□□□□ -1.86
SUPT20H-221ENST00000493537 IGKV1D-43A0A0B4J1Z2 117 aa3.42□□□□□ -1.86
SUPT20H-221ENST00000493537 A6NIN4 97 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms