RNA–Protein interactions for RNA: ENST00000493537.5

SUPT20H-221, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 2,149 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-221ENST00000493537 AEBP2Q6ZN18 517 aaPredicted RBP9.83□□□□□ -0.84
SUPT20H-221ENST00000493537 SLC24A1O60721 1099 aa9.36□□□□□ -0.91
SUPT20H-221ENST00000493537 CHIC1Q5VXU3 224 aa9.31□□□□□ -0.92
SUPT20H-221ENST00000493537 EHMT2Q96KQ7 1210 aa8.6□□□□□ -1.03
SUPT20H-221ENST00000493537 DAXXQ9UER7 740 aaPredicted RBP8.56□□□□□ -1.04
SUPT20H-221ENST00000493537 SENP3Q9H4L4 574 aaPredicted RBP8.41□□□□□ -1.06
SUPT20H-221ENST00000493537 TTBK1Q5TCY1 1321 aaPredicted RBP8.4□□□□□ -1.06
SUPT20H-221ENST00000493537 NCBP3Q53F19 620 aaKnown RBP8.39□□□□□ -1.07
SUPT20H-221ENST00000493537 MYT1Q01538 1121 aa8.37□□□□□ -1.07
SUPT20H-221ENST00000493537 RTN4Q9NQC3 1192 aaKnown RBP8.34□□□□□ -1.07
SUPT20H-221ENST00000493537 AMER1Q5JTC6 1135 aaPredicted RBP8.3□□□□□ -1.08
SUPT20H-221ENST00000493537 PLPPR3Q6T4P5 718 aa8.3□□□□□ -1.08
SUPT20H-221ENST00000493537 PHF23Q9BUL5 403 aaPredicted RBP8.3□□□□□ -1.08
SUPT20H-221ENST00000493537 POTEDQ86YR6 584 aa8.26□□□□□ -1.09
SUPT20H-221ENST00000493537 PELP1Q8IZL8 1130 aaKnown RBP8.25□□□□□ -1.09
SUPT20H-221ENST00000493537 ERICH6Q7L0X2 663 aa8.14□□□□□ -1.11
SUPT20H-221ENST00000493537 APLP2Q06481 763 aa8.13□□□□□ -1.11
SUPT20H-221ENST00000493537 ARXQ96QS3 562 aa8.11□□□□□ -1.11
SUPT20H-221ENST00000493537 KCNA4P22459 653 aa8.02□□□□□ -1.13
SUPT20H-221ENST00000493537 CSRNP3Q8WYN3 585 aa8□□□□□ -1.13
SUPT20H-221ENST00000493537 PRKCSHP14314 528 aaPredicted RBP7.97□□□□□ -1.13
SUPT20H-221ENST00000493537 RANGAP1P46060 587 aaPredicted RBP7.93□□□□□ -1.14
SUPT20H-221ENST00000493537 TIMELESSQ9UNS1 1208 aa7.87□□□□□ -1.15
SUPT20H-221ENST00000493537 FOXD1Q16676 465 aa7.84□□□□□ -1.15
SUPT20H-221ENST00000493537 HOMEZQ8IX15 550 aa7.83□□□□□ -1.16
SUPT20H-221ENST00000493537 TAOK2Q9UL54 1235 aa7.81□□□□□ -1.16
SUPT20H-221ENST00000493537 BCANQ96GW7 911 aa7.78□□□□□ -1.16
SUPT20H-221ENST00000493537 TULP1O00294 542 aaPredicted RBP7.78□□□□□ -1.16
SUPT20H-221ENST00000493537 TPRNQ4KMQ1 711 aa7.66□□□□□ -1.18
SUPT20H-221ENST00000493537 EIF5BO60841 1220 aaKnown RBP7.63□□□□□ -1.19
SUPT20H-221ENST00000493537 SLC4A1APQ9BWU0 796 aaKnown RBP7.63□□□□□ -1.19
SUPT20H-221ENST00000493537 PODXL2Q9NZ53 605 aa7.6□□□□□ -1.19
SUPT20H-221ENST00000493537 GTF3C3Q9Y5Q9 886 aa7.59□□□□□ -1.19
SUPT20H-221ENST00000493537 PLCB2Q00722 1185 aa7.58□□□□□ -1.2
SUPT20H-221ENST00000493537 KLHL34Q8N239 644 aa7.56□□□□□ -1.2
SUPT20H-221ENST00000493537 HAP1P54257 671 aaPredicted RBP7.49□□□□□ -1.21
SUPT20H-221ENST00000493537 NPM2Q86SE8 214 aaKnown RBP7.47□□□□□ -1.21
SUPT20H-221ENST00000493537 FBXO3Q9UK99 471 aa7.45□□□□□ -1.22
SUPT20H-221ENST00000493537 TMEM132AQ24JP5 1023 aa7.4□□□□□ -1.23
SUPT20H-221ENST00000493537 VSIG10Q8N0Z9 540 aa7.39□□□□□ -1.23
SUPT20H-221ENST00000493537 C14orf37Q86TY3 774 aa7.37□□□□□ -1.23
SUPT20H-221ENST00000493537 MSH5O43196 834 aa7.37□□□□□ -1.23
SUPT20H-221ENST00000493537 PIAS4Q8N2W9 510 aaPredicted RBP7.32□□□□□ -1.24
SUPT20H-221ENST00000493537 DCAF8L2P0C7V8 631 aa7.31□□□□□ -1.24
SUPT20H-221ENST00000493537 PPP6R1Q9UPN7 881 aa7.3□□□□□ -1.24
SUPT20H-221ENST00000493537 ADRA2BP18089 450 aa7.28□□□□□ -1.24
SUPT20H-221ENST00000493537 TRIM26Q12899 539 aaPredicted RBP7.22□□□□□ -1.25
SUPT20H-221ENST00000493537 ZBTB22O15209 634 aa7.22□□□□□ -1.25
SUPT20H-221ENST00000493537 PLEKHG5O94827 1062 aa7.2□□□□□ -1.26
SUPT20H-221ENST00000493537 FKBP8Q14318 412 aa7.18□□□□□ -1.26
SUPT20H-221ENST00000493537 KDM2AQ9Y2K7 1162 aa7.16□□□□□ -1.26
SUPT20H-221ENST00000493537 SUPT5HO00267 1087 aaKnown RBP7.16□□□□□ -1.26
SUPT20H-221ENST00000493537 HRCP23327 699 aa7.12□□□□□ -1.27
SUPT20H-221ENST00000493537 LOC105371045A0A1W2PR82 267 aa7.1□□□□□ -1.27
SUPT20H-221ENST00000493537 UBTFP17480 764 aaKnown RBP7.1□□□□□ -1.27
SUPT20H-221ENST00000493537 CDK11AQ9UQ88 783 aaPredicted RBP7.09□□□□□ -1.28
SUPT20H-221ENST00000493537 HMGB1P09429 215 aaKnown RBP7.07□□□□□ -1.28
SUPT20H-221ENST00000493537 FBLN2P98095 1184 aa7.07□□□□□ -1.28
SUPT20H-221ENST00000493537 BCL11AQ9H165 835 aa7.07□□□□□ -1.28
SUPT20H-221ENST00000493537 PDIA4P13667 645 aaKnown RBP7.06□□□□□ -1.28
SUPT20H-221ENST00000493537 CDK11BP21127 795 aaKnown RBP7.05□□□□□ -1.28
SUPT20H-221ENST00000493537 SHROOM4Q9ULL8 1493 aa7.04□□□□□ -1.28
SUPT20H-221ENST00000493537 NBR1Q14596 966 aa7□□□□□ -1.29
SUPT20H-221ENST00000493537 UBE2Q2Q8WVN8 375 aa7□□□□□ -1.29
SUPT20H-221ENST00000493537 CNKSR2Q8WXI2 1034 aa7□□□□□ -1.29
SUPT20H-221ENST00000493537 NPM3O75607 178 aaKnown RBP6.98□□□□□ -1.29
SUPT20H-221ENST00000493537 CHMP4AQ9BY43 222 aa6.98□□□□□ -1.29
SUPT20H-221ENST00000493537 CCDC9Q9Y3X0 531 aaKnown RBP6.98□□□□□ -1.29
SUPT20H-221ENST00000493537 HSP90B1P14625 803 aaKnown RBP6.97□□□□□ -1.29
SUPT20H-221ENST00000493537 BRD2P25440 801 aaKnown RBP6.95□□□□□ -1.3
SUPT20H-221ENST00000493537 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.92□□□□□ -1.3
SUPT20H-221ENST00000493537 SAMD1Q6SPF0 538 aaPredicted RBP6.92□□□□□ -1.3
SUPT20H-221ENST00000493537 FOXD4L1Q9NU39 408 aa6.9□□□□□ -1.3
SUPT20H-221ENST00000493537 PDE4CQ08493 712 aa6.88□□□□□ -1.31
SUPT20H-221ENST00000493537 TAF7LQ5H9L4 462 aa6.88□□□□□ -1.31
SUPT20H-221ENST00000493537 NEFLP07196 543 aa6.88□□□□□ -1.31
SUPT20H-221ENST00000493537 PAXIP1Q6ZW49 1069 aaPredicted RBP6.88□□□□□ -1.31
SUPT20H-221ENST00000493537 ZBTB7CA1YPR0 619 aa6.87□□□□□ -1.31
SUPT20H-221ENST00000493537 IGSF3O75054 1194 aa6.86□□□□□ -1.31
SUPT20H-221ENST00000493537 CFAP44Q96MT7 982 aa6.85□□□□□ -1.31
SUPT20H-221ENST00000493537 PUS7Q96PZ0 661 aaKnown RBP6.85□□□□□ -1.31
SUPT20H-221ENST00000493537 BBXQ8WY36 941 aaPredicted RBP6.84□□□□□ -1.31
SUPT20H-221ENST00000493537 PPP4R3CPQ6ZMV5 832 aa6.83□□□□□ -1.32
SUPT20H-221ENST00000493537 FAM9AQ8IZU1 332 aaPredicted RBP6.83□□□□□ -1.32
SUPT20H-221ENST00000493537 DHX37Q8IY37 1157 aaKnown RBP6.8□□□□□ -1.32
SUPT20H-221ENST00000493537 TSHZ2Q9NRE2 1034 aa6.8□□□□□ -1.32
SUPT20H-221ENST00000493537 POLR3GLQ9BT43 218 aa6.76□□□□□ -1.33
SUPT20H-221ENST00000493537 BCCIPQ9P287 314 aaKnown RBP eCLIP6.73□□□□□ -1.33
SUPT20H-221ENST00000493537 ARID3AQ99856 593 aa6.73□□□□□ -1.33
SUPT20H-221ENST00000493537 SPRYD3Q8NCJ5 442 aa6.72□□□□□ -1.33
SUPT20H-221ENST00000493537 PKNOX2Q96KN3 472 aa6.71□□□□□ -1.33
SUPT20H-221ENST00000493537 RSPH6AQ9H0K4 717 aa6.71□□□□□ -1.33
SUPT20H-221ENST00000493537 DNAJC5Q9H3Z4 198 aa6.71□□□□□ -1.34
SUPT20H-221ENST00000493537 SCAF1Q9H7N4 1312 aaKnown RBP6.7□□□□□ -1.34
SUPT20H-221ENST00000493537 MAPK8IP2Q13387 824 aaPredicted RBP6.7□□□□□ -1.34
SUPT20H-221ENST00000493537 ZMYND15Q9H091 742 aa6.7□□□□□ -1.34
SUPT20H-221ENST00000493537 NECTIN2Q92692 538 aa6.69□□□□□ -1.34
SUPT20H-221ENST00000493537 PKD2Q13563 968 aa6.68□□□□□ -1.34
SUPT20H-221ENST00000493537 ZNF326Q5BKZ1 582 aaKnown RBP6.68□□□□□ -1.34
SUPT20H-221ENST00000493537 NPM1P06748 294 aaKnown RBP eCLIP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms