RNA–Protein interactions for RNA: ENST00000463222.1

VRK2-208, Transcript of vaccinia related kinase 2, humanhuman

TSL 3

Gene VRK2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-208ENST00000463222 NUP98P52948 1817 aa1.99□□□□□ -2.09
VRK2-208ENST00000463222 LAMA2P24043 3122 aaKnown RBP1.99□□□□□ -2.09
VRK2-208ENST00000463222 VCANP13611 3396 aa1.99□□□□□ -2.09
VRK2-208ENST00000463222 CDH23Q9H251 3354 aa1.99□□□□□ -2.09
VRK2-208ENST00000463222 NAPSAO96009 420 aa1.99□□□□□ -2.09
VRK2-208ENST00000463222 SHBGP04278 402 aa1.99□□□□□ -2.09
VRK2-208ENST00000463222 CASP1P29466 404 aa1.99□□□□□ -2.09
VRK2-208ENST00000463222 SRIP30626 198 aa1.99□□□□□ -2.09
VRK2-208ENST00000463222 ATP5G3P48201 142 aa1.99□□□□□ -2.09
VRK2-208ENST00000463222 HSPE1P61604 102 aaKnown RBP1.99□□□□□ -2.09
VRK2-208ENST00000463222 DEFB103AP81534 67 aa1.99□□□□□ -2.09
VRK2-208ENST00000463222 KRR1Q13601 381 aaKnown RBP1.99□□□□□ -2.09
VRK2-208ENST00000463222 LYG2Q86SG7 212 aa1.99□□□□□ -2.09
VRK2-208ENST00000463222 HIST3H2BBQ8N257 126 aa1.99□□□□□ -2.09
VRK2-208ENST00000463222 C11orf40Q8WZ69 217 aa1.99□□□□□ -2.09
VRK2-208ENST00000463222 GPR146Q96CH1 333 aa1.99□□□□□ -2.09
VRK2-208ENST00000463222 BAIAP2Q9UQB8 552 aa1.99□□□□□ -2.09
VRK2-208ENST00000463222 PAPPA2Q9BXP8 1791 aa1.99□□□□□ -2.09
VRK2-208ENST00000463222 CCDC88CQ9P219 2028 aa1.99□□□□□ -2.09
VRK2-208ENST00000463222 CUL9Q8IWT3 2517 aa1.99□□□□□ -2.09
VRK2-208ENST00000463222 DENND4CQ5VZ89 1909 aa1.99□□□□□ -2.09
VRK2-208ENST00000463222 CACNA1GO43497 2377 aa1.99□□□□□ -2.09
VRK2-208ENST00000463222 MED23Q9ULK4 1368 aa1.98□□□□□ -2.09
VRK2-208ENST00000463222 A0A1B0GUL6 1792 aa1.98□□□□□ -2.09
VRK2-208ENST00000463222 TRAV4A0A0B4J268 109 aa1.98□□□□□ -2.09
VRK2-208ENST00000463222 E5RI56 91 aa1.98□□□□□ -2.09
VRK2-208ENST00000463222 ZNF737O75373 536 aa1.98□□□□□ -2.09
VRK2-208ENST00000463222 CRYGAP11844 174 aa1.98□□□□□ -2.09
VRK2-208ENST00000463222 FXYD2P54710 66 aa1.98□□□□□ -2.09
VRK2-208ENST00000463222 NDUFA5Q16718 116 aa1.98□□□□□ -2.09
VRK2-208ENST00000463222 ARHGAP11BQ3KRB8 267 aa1.98□□□□□ -2.09
VRK2-208ENST00000463222 LINC01554Q52M75 96 aa1.98□□□□□ -2.09
VRK2-208ENST00000463222 KHDC3LQ587J8 217 aa1.98□□□□□ -2.09
VRK2-208ENST00000463222 LCA10Q71F78 164 aa1.98□□□□□ -2.09
VRK2-208ENST00000463222 TMED4Q7Z7H5 227 aa1.98□□□□□ -2.09
VRK2-208ENST00000463222 SIGLECL1Q8N7X8 197 aa1.98□□□□□ -2.09
VRK2-208ENST00000463222 MED29Q9NX70 200 aa1.98□□□□□ -2.09
VRK2-208ENST00000463222 COL1A1P02452 1464 aaPredicted RBP1.98□□□□□ -2.09
VRK2-208ENST00000463222 OBSL1O75147 1896 aa1.98□□□□□ -2.09
VRK2-208ENST00000463222 EYSQ5T1H1 3165 aa1.98□□□□□ -2.09
VRK2-208ENST00000463222 RFX7Q2KHR2 1363 aa1.98□□□□□ -2.09
VRK2-208ENST00000463222 A0A0C4DFX4 3053 aa1.97□□□□□ -2.09
VRK2-208ENST00000463222 MDC1Q14676 2089 aaKnown RBP1.97□□□□□ -2.09
VRK2-208ENST00000463222 PSME4Q14997 1843 aa1.97□□□□□ -2.09
VRK2-208ENST00000463222 C1QCP02747 245 aa1.97□□□□□ -2.09
VRK2-208ENST00000463222 PSMD8P48556 350 aa1.97□□□□□ -2.09
VRK2-208ENST00000463222 PIGPP57054 158 aa1.97□□□□□ -2.09
VRK2-208ENST00000463222 VBP1P61758 197 aa1.97□□□□□ -2.09
VRK2-208ENST00000463222 RHEBQ15382 184 aa1.97□□□□□ -2.09
VRK2-208ENST00000463222 C7orf65Q6ZTY9 151 aa1.97□□□□□ -2.09
VRK2-208ENST00000463222 WFDC11Q8NEX6 87 aa1.97□□□□□ -2.09
VRK2-208ENST00000463222 WFDC5Q8TCV5 224 aa1.97□□□□□ -2.09
VRK2-208ENST00000463222 NEK7Q8TDX7 302 aa1.97□□□□□ -2.09
VRK2-208ENST00000463222 C2orf50Q96LR7 162 aa1.97□□□□□ -2.09
VRK2-208ENST00000463222 CST9LQ9H4G1 147 aa1.97□□□□□ -2.09
VRK2-208ENST00000463222 PARVBQ9HBI1 364 aa1.97□□□□□ -2.09
VRK2-208ENST00000463222 OSTCQ9NRP0 149 aa1.97□□□□□ -2.09
VRK2-208ENST00000463222 CKLFQ9UBR5 152 aa1.97□□□□□ -2.09
VRK2-208ENST00000463222 SS18L2Q9UHA2 77 aa1.97□□□□□ -2.09
VRK2-208ENST00000463222 LAMB1P07942 1786 aa1.97□□□□□ -2.09
VRK2-208ENST00000463222 COL6A3P12111 3177 aa1.97□□□□□ -2.09
VRK2-208ENST00000463222 ZNF860A6NHJ4 632 aa1.96□□□□□ -2.1
VRK2-208ENST00000463222 IBA57-AS1B1ANH7 110 aa1.96□□□□□ -2.1
VRK2-208ENST00000463222 J3QRK9 145 aa1.96□□□□□ -2.1
VRK2-208ENST00000463222 OVOL1O14753 267 aa1.96□□□□□ -2.1
VRK2-208ENST00000463222 CYB5BO43169 146 aa1.96□□□□□ -2.1
VRK2-208ENST00000463222 TAS2R41P59536 307 aa1.96□□□□□ -2.1
VRK2-208ENST00000463222 LCN15Q6UWW0 184 aa1.96□□□□□ -2.1
VRK2-208ENST00000463222 AAED1Q7RTV5 226 aa1.96□□□□□ -2.1
VRK2-208ENST00000463222 TRAPPC6BQ86SZ2 158 aa1.96□□□□□ -2.1
VRK2-208ENST00000463222 STX12Q86Y82 276 aa1.96□□□□□ -2.1
VRK2-208ENST00000463222 ZNF439Q8NDP4 499 aa1.96□□□□□ -2.1
VRK2-208ENST00000463222 OR8B3Q8NGG8 313 aa1.96□□□□□ -2.1
VRK2-208ENST00000463222 OR5A1Q8NGJ0 315 aa1.96□□□□□ -2.1
VRK2-208ENST00000463222 PRRT1Q99946 306 aa1.96□□□□□ -2.1
VRK2-208ENST00000463222 PYCARDQ9ULZ3 195 aa1.96□□□□□ -2.1
VRK2-208ENST00000463222 AMMECR1Q9Y4X0 333 aaPredicted RBP1.96□□□□□ -2.1
VRK2-208ENST00000463222 ARAP2Q8WZ64 1704 aa1.96□□□□□ -2.1
VRK2-208ENST00000463222 PRUNE2Q8WUY3 3088 aa1.96□□□□□ -2.1
VRK2-208ENST00000463222 SPTBN5Q9NRC6 3674 aaKnown RBP1.96□□□□□ -2.1
VRK2-208ENST00000463222 UNC80Q8N2C7 3258 aa1.95□□□□□ -2.1
VRK2-208ENST00000463222 IGKV1D-42A0A075B6H8 117 aa1.95□□□□□ -2.1
VRK2-208ENST00000463222 TRBV19A0A075B6N1 114 aa1.95□□□□□ -2.1
VRK2-208ENST00000463222 G3V2T6 193 aa1.95□□□□□ -2.1
VRK2-208ENST00000463222 SDCBPO00560 298 aaPredicted RBP1.95□□□□□ -2.1
VRK2-208ENST00000463222 BANF1O75531 89 aa1.95□□□□□ -2.1
VRK2-208ENST00000463222 IFNA1P01562 189 aa1.95□□□□□ -2.1
VRK2-208ENST00000463222 PMP2P02689 132 aa1.95□□□□□ -2.1
VRK2-208ENST00000463222 C1QBP02746 253 aa1.95□□□□□ -2.1
VRK2-208ENST00000463222 YPEL3P61236 119 aaPredicted RBP1.95□□□□□ -2.1
VRK2-208ENST00000463222 NCALDP61601 193 aa1.95□□□□□ -2.1
VRK2-208ENST00000463222 ZNF345Q14585 488 aa1.95□□□□□ -2.1
VRK2-208ENST00000463222 POU6F1Q14863 301 aa1.95□□□□□ -2.1
VRK2-208ENST00000463222 NNATQ16517 81 aa1.95□□□□□ -2.1
VRK2-208ENST00000463222 LYRM7Q5U5X0 104 aa1.95□□□□□ -2.1
VRK2-208ENST00000463222 DPPA3Q6W0C5 159 aa1.95□□□□□ -2.1
VRK2-208ENST00000463222 DHFR2Q86XF0 187 aa1.95□□□□□ -2.1
VRK2-208ENST00000463222 SMIM20Q8N5G0 67 aa1.95□□□□□ -2.1
VRK2-208ENST00000463222 OR13C6PQ8NH95 151 aa1.95□□□□□ -2.1
VRK2-208ENST00000463222 C8orf4Q9NR00 106 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms