RNA–Protein interactions for RNA: ENST00000451349.1

SSXP4-201, Transcript of SSX family pseudogene 4, humanhuman

BASIC

Gene SSXP4, Length 245 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP4-201ENST00000451349 SIGLECL1Q8N7X8 197 aa2.36□□□□□ -2.03
SSXP4-201ENST00000451349 ATP6V0E2Q8NHE4 81 aa2.36□□□□□ -2.03
SSXP4-201ENST00000451349 C11orf1Q9H5F2 150 aa2.36□□□□□ -2.03
SSXP4-201ENST00000451349 BCL2L10Q9HD36 194 aa2.36□□□□□ -2.03
SSXP4-201ENST00000451349 SMCO4Q9NRQ5 59 aa2.36□□□□□ -2.03
SSXP4-201ENST00000451349 TAS2R4Q9NYW5 299 aa2.36□□□□□ -2.03
SSXP4-201ENST00000451349 CCDC88BA6NC98 1476 aa2.36□□□□□ -2.03
SSXP4-201ENST00000451349 MAGI2Q86UL8 1455 aa2.36□□□□□ -2.03
SSXP4-201ENST00000451349 RALGAPA2Q2PPJ7 1873 aa2.36□□□□□ -2.03
SSXP4-201ENST00000451349 TCF20Q9UGU0 1960 aaKnown RBP2.36□□□□□ -2.03
SSXP4-201ENST00000451349 MED1Q15648 1581 aaPredicted RBP2.36□□□□□ -2.03
SSXP4-201ENST00000451349 THOC2Q8NI27 1593 aaKnown RBP2.36□□□□□ -2.03
SSXP4-201ENST00000451349 DOCK6Q96HP0 2047 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 QRICH2Q9H0J4 1663 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 LOC107986453A0A1B0GWG9 222 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 A0A1W2PP18 115 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 C7orf66A4D0T2 115 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 C17orf51A8MQB3 221 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 OOSP1A8MZH6 123 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 ZNF736B4DX44 427 aaPredicted RBP2.35□□□□□ -2.03
SSXP4-201ENST00000451349 F8W1H4 67 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 SDCBPO00560 298 aaPredicted RBP2.35□□□□□ -2.03
SSXP4-201ENST00000451349 SLC25A20O43772 301 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 SSSCA1O60232 199 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 OR1I1O60431 355 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 EDF1O60869 148 aaKnown RBP2.35□□□□□ -2.03
SSXP4-201ENST00000451349 SNCGO76070 127 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 NPYP01303 97 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 IGHV1-69P01742 117 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 IGHV1-46P01743 117 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 APOC3P02656 99 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 GYPAP02724 150 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 CD3DP04234 171 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 GYPBP06028 91 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 IGHV4-34P06331 123 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 ZNF883P0CG24 379 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 SAA1P0DJI8 122 aaPredicted RBP2.35□□□□□ -2.03
SSXP4-201ENST00000451349 CCL3P10147 92 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 SNCAP37840 140 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 Q0VG73 95 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 KHDC3LQ587J8 217 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 C10orf91Q5T1B1 145 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 C16orf47Q6ZP98 133 aaPredicted RBP2.35□□□□□ -2.03
SSXP4-201ENST00000451349 PCP2Q8IVA1 136 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 OR5AS1Q8N127 324 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 Q8N377 158 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 CNEP1R1Q8N9A8 125 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 LINC01006Q8NI28 216 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 C10orf82Q8WW14 230 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 HYLS1Q96M11 299 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 VGLL1Q99990 258 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 REG4Q9BYZ8 158 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 LINC00312Q9Y6C7 94 aa2.35□□□□□ -2.03
SSXP4-201ENST00000451349 ATG2AQ2TAZ0 1938 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 AKAP11Q9UKA4 1901 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 FANCAO15360 1455 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 COL1A1P02452 1464 aaPredicted RBP2.34□□□□□ -2.03
SSXP4-201ENST00000451349 GAPVD1Q14C86 1478 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 ARHGAP5Q13017 1502 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 TOPBP1Q92547 1522 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 TRBV24-1A0A075B6N3 115 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 TMEM223A0PJW6 202 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 A6NED7 52 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 K7EP34 96 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 PDCD5O14737 125 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 LYRM1O43325 122 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 SH2D1AO60880 128 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 PITX3O75364 302 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 NDUFB6O95139 128 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 CYB5AP00167 134 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 MT-ATP8P03928 68 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 ZNF705BP0CI00 300 aaPredicted RBP2.34□□□□□ -2.03
SSXP4-201ENST00000451349 CGB3P0DN86 165 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 CGB7P0DN87 165 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 CCL4P13236 92 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 NFYAP23511 347 aaPredicted RBP2.34□□□□□ -2.03
SSXP4-201ENST00000451349 FUSP35637 526 aaKnown RBP eCLIP2.34□□□□□ -2.03
SSXP4-201ENST00000451349 ASIPP42127 132 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 BLCAPP62952 87 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 DEFA5Q01523 94 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 CIRBPQ14011 172 aaKnown RBP2.34□□□□□ -2.03
SSXP4-201ENST00000451349 CDK5R1Q15078 307 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 KISS1Q15726 138 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 MIAQ16674 131 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 Q1RN00 199 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 ASB16-AS1Q495Z4 193 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.34□□□□□ -2.03
SSXP4-201ENST00000451349 C12orf73Q69YU5 71 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 PATE2Q6UY27 113 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 DPPA3Q6W0C5 159 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 SOSTDC1Q6X4U4 206 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 ZFP2Q6ZN57 461 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 Q6ZS92 163 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 KLHL30-AS1Q8NEE0 82 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 C16orf74Q96GX8 76 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 UPK3BQ9BT76 320 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 DEFB126Q9BYW3 111 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 TTTY13Q9BZ97 58 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 NPVFQ9HCQ7 196 aa2.34□□□□□ -2.03
SSXP4-201ENST00000451349 UQCR10Q9UDW1 63 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms