RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 PRR14LQ5THK1 2151 aa5.52□□□□□ -1.53
USP46-201ENST00000441222 CD55P08174 381 aa5.52□□□□□ -1.53
USP46-201ENST00000441222 AGMATQ9BSE5 352 aa5.52□□□□□ -1.53
USP46-201ENST00000441222 TIMM21Q9BVV7 248 aa5.52□□□□□ -1.53
USP46-201ENST00000441222 GATA3P23771 443 aa5.51□□□□□ -1.53
USP46-201ENST00000441222 ATP1A1-AS1Q5TC04 95 aa5.51□□□□□ -1.53
USP46-201ENST00000441222 PRIMA1Q86XR5 153 aa5.51□□□□□ -1.53
USP46-201ENST00000441222 IGHV3OR16-8A0A075B7F1 116 aa5.51□□□□□ -1.53
USP46-201ENST00000441222 D6R8Y8 96 aa5.51□□□□□ -1.53
USP46-201ENST00000441222 SOCS3O14543 225 aa5.51□□□□□ -1.53
USP46-201ENST00000441222 PYYP10082 97 aa5.51□□□□□ -1.53
USP46-201ENST00000441222 COX11Q9Y6N1 276 aa5.51□□□□□ -1.53
USP46-201ENST00000441222 NCOA6Q14686 2063 aaPredicted RBP5.51□□□□□ -1.53
USP46-201ENST00000441222 IGHV2-26A0A0B4J1V2 119 aa5.51□□□□□ -1.53
USP46-201ENST00000441222 EFNA4P52798 201 aa5.51□□□□□ -1.53
USP46-201ENST00000441222 HIST1H2BLQ99880 126 aa5.51□□□□□ -1.53
USP46-201ENST00000441222 A0A0U1RRA0 63 aa5.51□□□□□ -1.53
USP46-201ENST00000441222 PSG1P11464 419 aa5.51□□□□□ -1.53
USP46-201ENST00000441222 NSUN5P1Q3KNT7 163 aa5.51□□□□□ -1.53
USP46-201ENST00000441222 RPUSD1Q9UJJ7 312 aaKnown RBP5.51□□□□□ -1.53
USP46-201ENST00000441222 IGHV3-64A0A075B6Q5 118 aa5.51□□□□□ -1.53
USP46-201ENST00000441222 RIPPLY3P57055 190 aa5.51□□□□□ -1.53
USP46-201ENST00000441222 FAM201AQ5SY85 155 aa5.51□□□□□ -1.53
USP46-201ENST00000441222 RMI2Q96E14 147 aa5.51□□□□□ -1.53
USP46-201ENST00000441222 SRRM5B3KS81 715 aa5.51□□□□□ -1.53
USP46-201ENST00000441222 SPATA31B1PQ5VZV4 182 aa5.51□□□□□ -1.53
USP46-201ENST00000441222 CELA3BP08861 270 aa5.5□□□□□ -1.53
USP46-201ENST00000441222 PSG3Q16557 428 aa5.5□□□□□ -1.53
USP46-201ENST00000441222 C1orf194Q5T5A4 169 aa5.5□□□□□ -1.53
USP46-201ENST00000441222 UBL5Q9BZL1 73 aa5.5□□□□□ -1.53
USP46-201ENST00000441222 TMEM126AQ9H061 195 aa5.5□□□□□ -1.53
USP46-201ENST00000441222 SUPT4H1P63272 117 aaKnown RBP5.5□□□□□ -1.53
USP46-201ENST00000441222 SRSF2Q01130 221 aaKnown RBP5.5□□□□□ -1.53
USP46-201ENST00000441222 TRPT1Q86TN4 253 aaKnown RBP5.5□□□□□ -1.53
USP46-201ENST00000441222 CSTL1Q9H114 145 aa5.5□□□□□ -1.53
USP46-201ENST00000441222 DSCAML1Q8TD84 2053 aa5.5□□□□□ -1.53
USP46-201ENST00000441222 C4orf51C9J302 202 aa5.5□□□□□ -1.53
USP46-201ENST00000441222 C1QCP02747 245 aa5.5□□□□□ -1.53
USP46-201ENST00000441222 Q5PR19 223 aa5.5□□□□□ -1.53
USP46-201ENST00000441222 LCN12Q6JVE5 192 aa5.5□□□□□ -1.53
USP46-201ENST00000441222 LIME1Q9H400 295 aa5.5□□□□□ -1.53
USP46-201ENST00000441222 ZNF561-AS1K7EIQ3 104 aa5.5□□□□□ -1.53
USP46-201ENST00000441222 PPIFP30405 207 aaKnown RBP5.5□□□□□ -1.53
USP46-201ENST00000441222 VMO1Q7Z5L0 202 aa5.5□□□□□ -1.53
USP46-201ENST00000441222 GFRA4Q9GZZ7 299 aa5.5□□□□□ -1.53
USP46-201ENST00000441222 PLXNA2O75051 1894 aa5.5□□□□□ -1.53
USP46-201ENST00000441222 CELA3AP09093 270 aa5.5□□□□□ -1.53
USP46-201ENST00000441222 CFHR1Q03591 330 aa5.5□□□□□ -1.53
USP46-201ENST00000441222 TPTE2P1Q5T6R2 138 aa5.5□□□□□ -1.53
USP46-201ENST00000441222 FGF16O43320 207 aa5.5□□□□□ -1.53
USP46-201ENST00000441222 GUSBP1Q15486 140 aa5.5□□□□□ -1.53
USP46-201ENST00000441222 C5orf64Q2M2E5 130 aa5.5□□□□□ -1.53
USP46-201ENST00000441222 LHFPL4Q7Z7J7 247 aa5.5□□□□□ -1.53
USP46-201ENST00000441222 IGKV1D-13A0A0B4J2D9 117 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 MLNRO43193 412 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 IGKV1-13P0DP09 117 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 SRD5A1P18405 259 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 LTBRP36941 435 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 CDKN1AP38936 164 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 TREML4Q6UXN2 200 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 SPG11Q96JI7 2443 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 PLXNA3P51805 1871 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 IGHV1-8P0DP01 117 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 DSCR8Q96T75 97 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 LSM4Q9Y4Z0 139 aaKnown RBP5.49□□□□□ -1.53
USP46-201ENST00000441222 EML5Q05BV3 1969 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 IGKV2-40A0A087WW87 121 aaPredicted RBP5.49□□□□□ -1.53
USP46-201ENST00000441222 IGHV1-18A0A0C4DH31 117 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 IGKV2D-40P01614 121 aaPredicted RBP5.49□□□□□ -1.53
USP46-201ENST00000441222 ZNF124Q15973 351 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 ZNF672Q499Z4 452 aaPredicted RBP5.49□□□□□ -1.53
USP46-201ENST00000441222 UBE2WQ96B02 151 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 C1orf159Q96HA4 380 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 ARHGAP32A7KAX9 2087 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 IGHV1-3A0A0C4DH29 117 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 TMEM178BH3BS89 294 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 CD5LO43866 347 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 PRTN3P24158 256 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 C3orf36Q3SXR2 165 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 PIP4P2Q8N4L2 257 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 NKAPP1Q8N9T2 125 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 SYS1-DBNDD2H3BUS1 97 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 IGHV1-46P01743 117 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 TMEM141Q96I45 108 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 DEPPQ9NTK1 212 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 MUC4Q99102 2169 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 GREM1O60565 184 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 SELLP14151 372 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 LYZL1Q6UWQ5 148 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 HIST3H2BBQ8N257 126 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 NUP35Q8NFH5 326 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 MMP23AO75900 390 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 NDUFB8O95169 186 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 ACTL10Q5JWF8 245 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 UTF1Q5T230 341 aa5.49□□□□□ -1.53
USP46-201ENST00000441222 C2orf16Q68DN1 1984 aa5.48□□□□□ -1.53
USP46-201ENST00000441222 TNS1Q9HBL0 1735 aaKnown RBP5.48□□□□□ -1.53
USP46-201ENST00000441222 IGKV1D-43A0A0B4J1Z2 117 aa5.48□□□□□ -1.53
USP46-201ENST00000441222 UBE2V1Q13404 147 aa5.48□□□□□ -1.53
USP46-201ENST00000441222 DEFB121Q5J5C9 76 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms