RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 TMEM68Q96MH6 324 aa9.53□□□□□ -0.88
HMGCL-202ENST00000374487 CHRDL1Q9BU40 450 aa9.53□□□□□ -0.88
HMGCL-202ENST00000374487 BPESC1Q9GZL8 116 aa9.53□□□□□ -0.88
HMGCL-202ENST00000374487 MRPL27Q9P0M9 148 aaKnown RBP9.53□□□□□ -0.88
HMGCL-202ENST00000374487 TMEM14CQ9P0S9 112 aa9.53□□□□□ -0.88
HMGCL-202ENST00000374487 S4R3C0 116 aa9.53□□□□□ -0.88
HMGCL-202ENST00000374487 MED13LQ71F56 2210 aa9.52□□□□□ -0.88
HMGCL-202ENST00000374487 ABCA1O95477 2261 aa9.52□□□□□ -0.89
HMGCL-202ENST00000374487 A0A1B0GUS0 222 aa9.52□□□□□ -0.89
HMGCL-202ENST00000374487 NPIPB5A8MRT5 1133 aa9.52□□□□□ -0.89
HMGCL-202ENST00000374487 HIST1H1EP10412 219 aaKnown RBP9.52□□□□□ -0.89
HMGCL-202ENST00000374487 ASPHD1Q5U4P2 390 aa9.52□□□□□ -0.89
HMGCL-202ENST00000374487 MRPL54Q6P161 138 aaKnown RBP9.52□□□□□ -0.89
HMGCL-202ENST00000374487 FAM231DQ6ZW35 169 aa9.52□□□□□ -0.89
HMGCL-202ENST00000374487 NUDT10Q8NFP7 164 aa9.52□□□□□ -0.89
HMGCL-202ENST00000374487 CMTM2Q8TAZ6 248 aa9.52□□□□□ -0.89
HMGCL-202ENST00000374487 FAM168AQ92567 244 aa9.52□□□□□ -0.89
HMGCL-202ENST00000374487 NUDT11Q96G61 164 aa9.52□□□□□ -0.89
HMGCL-202ENST00000374487 GPR82Q96P67 336 aa9.52□□□□□ -0.89
HMGCL-202ENST00000374487 THYN1Q9P016 225 aa9.52□□□□□ -0.89
HMGCL-202ENST00000374487 KLF12Q9Y4X4 402 aa9.52□□□□□ -0.89
HMGCL-202ENST00000374487 TRAV30A0A087WSZ9 112 aa9.51□□□□□ -0.89
HMGCL-202ENST00000374487 TOMM40O96008 361 aa9.51□□□□□ -0.89
HMGCL-202ENST00000374487 IL4P05112 153 aa9.51□□□□□ -0.89
HMGCL-202ENST00000374487 GZMBP10144 247 aa9.51□□□□□ -0.89
HMGCL-202ENST00000374487 UBE2E1P51965 193 aa9.51□□□□□ -0.89
HMGCL-202ENST00000374487 MFAP4P55083 255 aa9.51□□□□□ -0.89
HMGCL-202ENST00000374487 PRSS57Q6UWY2 283 aa9.51□□□□□ -0.89
HMGCL-202ENST00000374487 BPIFA4PQ86YQ2 179 aa9.51□□□□□ -0.89
HMGCL-202ENST00000374487 OR5R1Q8NH85 324 aa9.51□□□□□ -0.89
HMGCL-202ENST00000374487 RNF125Q96EQ8 232 aa9.51□□□□□ -0.89
HMGCL-202ENST00000374487 SMIM12Q96EX1 92 aa9.51□□□□□ -0.89
HMGCL-202ENST00000374487 FMC1Q96HJ9 113 aa9.51□□□□□ -0.89
HMGCL-202ENST00000374487 ZNF586Q9NXT0 402 aa9.51□□□□□ -0.89
HMGCL-202ENST00000374487 TBL2Q9Y4P3 447 aaKnown RBP9.51□□□□□ -0.89
HMGCL-202ENST00000374487 IGLV11-55A0A075B6I3 123 aa9.51□□□□□ -0.89
HMGCL-202ENST00000374487 IZUMO1RA6ND01 250 aa9.51□□□□□ -0.89
HMGCL-202ENST00000374487 TCRAP04437 139 aa9.51□□□□□ -0.89
HMGCL-202ENST00000374487 EBI3Q14213 229 aa9.51□□□□□ -0.89
HMGCL-202ENST00000374487 USF2Q15853 346 aaPredicted RBP9.51□□□□□ -0.89
HMGCL-202ENST00000374487 Q56UQ5 140 aa9.51□□□□□ -0.89
HMGCL-202ENST00000374487 S100A7AQ86SG5 101 aa9.51□□□□□ -0.89
HMGCL-202ENST00000374487 BAGE3Q86Y29 109 aa9.51□□□□□ -0.89
HMGCL-202ENST00000374487 TTC9CQ8N5M4 171 aa9.51□□□□□ -0.89
HMGCL-202ENST00000374487 Q8N6K4 173 aa9.51□□□□□ -0.89
HMGCL-202ENST00000374487 OR4F17Q8NGA8 305 aa9.51□□□□□ -0.89
HMGCL-202ENST00000374487 GRAMD2BQ96HH9 432 aa9.51□□□□□ -0.89
HMGCL-202ENST00000374487 SHANK2-AS3Q9BTD1 123 aa9.51□□□□□ -0.89
HMGCL-202ENST00000374487 PRDM13Q9H4Q3 707 aa9.51□□□□□ -0.89
HMGCL-202ENST00000374487 ZNF331Q9NQX6 463 aaPredicted RBP9.51□□□□□ -0.89
HMGCL-202ENST00000374487 OTORQ9NRC9 128 aa9.51□□□□□ -0.89
HMGCL-202ENST00000374487 C1RLQ9NZP8 487 aa9.51□□□□□ -0.89
HMGCL-202ENST00000374487 RNF24Q9Y225 148 aa9.51□□□□□ -0.89
HMGCL-202ENST00000374487 AMY1AP04745 511 aa9.5□□□□□ -0.89
HMGCL-202ENST00000374487 BRS3P32247 399 aa9.5□□□□□ -0.89
HMGCL-202ENST00000374487 NDPQ00604 133 aa9.5□□□□□ -0.89
HMGCL-202ENST00000374487 ZNF491Q8N8L2 437 aa9.5□□□□□ -0.89
HMGCL-202ENST00000374487 FANCD2OSQ96PS1 177 aa9.5□□□□□ -0.89
HMGCL-202ENST00000374487 A0A096LNT2 108 aa9.5□□□□□ -0.89
HMGCL-202ENST00000374487 FCGR2BP31994 310 aaPredicted RBP9.5□□□□□ -0.89
HMGCL-202ENST00000374487 LMO4P61968 165 aa9.5□□□□□ -0.89
HMGCL-202ENST00000374487 TMEM136Q6ZRR5 245 aa9.5□□□□□ -0.89
HMGCL-202ENST00000374487 EXOC3-AS1Q8N2X6 119 aa9.5□□□□□ -0.89
HMGCL-202ENST00000374487 C10orf105Q8TEF2 133 aa9.5□□□□□ -0.89
HMGCL-202ENST00000374487 TBX15Q96SF7 602 aa9.5□□□□□ -0.89
HMGCL-202ENST00000374487 LPAR2Q9HBW0 351 aa9.5□□□□□ -0.89
HMGCL-202ENST00000374487 C21orf62Q9NYP8 219 aa9.5□□□□□ -0.89
HMGCL-202ENST00000374487 TRAV20A0A0B4J274 112 aa9.49□□□□□ -0.89
HMGCL-202ENST00000374487 NUPR1O60356 82 aa9.49□□□□□ -0.89
HMGCL-202ENST00000374487 LY6G6DO95868 133 aa9.49□□□□□ -0.89
HMGCL-202ENST00000374487 HLA-DQA1P01909 254 aa9.49□□□□□ -0.89
HMGCL-202ENST00000374487 SAA4P35542 130 aa9.49□□□□□ -0.89
HMGCL-202ENST00000374487 CLEC2AQ6UVW9 174 aa9.49□□□□□ -0.89
HMGCL-202ENST00000374487 ZFHX3Q15911 3703 aa9.49□□□□□ -0.89
HMGCL-202ENST00000374487 TSTD3H0UI37 97 aa9.48□□□□□ -0.89
HMGCL-202ENST00000374487 H3BRN7 92 aa9.48□□□□□ -0.89
HMGCL-202ENST00000374487 SCGB2A1O75556 95 aa9.48□□□□□ -0.89
HMGCL-202ENST00000374487 LTAP01374 205 aa9.48□□□□□ -0.89
HMGCL-202ENST00000374487 CTAG1AP78358 180 aa9.48□□□□□ -0.89
HMGCL-202ENST00000374487 KRTAP1-1Q07627 177 aa9.48□□□□□ -0.89
HMGCL-202ENST00000374487 TSKUQ8WUA8 353 aa9.48□□□□□ -0.89
HMGCL-202ENST00000374487 DAZAP1Q96EP5 407 aaKnown RBP9.48□□□□□ -0.89
HMGCL-202ENST00000374487 MS4A10Q96PG2 267 aa9.48□□□□□ -0.89
HMGCL-202ENST00000374487 ANK3Q12955 4377 aaKnown RBP9.48□□□□□ -0.89
HMGCL-202ENST00000374487 TRBV19A0A075B6N1 114 aa9.48□□□□□ -0.89
HMGCL-202ENST00000374487 IGHV7-81A0A0B4J1V7 117 aa9.48□□□□□ -0.89
HMGCL-202ENST00000374487 IGHV4-61A0A0C4DH41 118 aa9.48□□□□□ -0.89
HMGCL-202ENST00000374487 WI2-2373I1.2A0A1W2PRP0 233 aa9.48□□□□□ -0.89
HMGCL-202ENST00000374487 SERF1AO75920 110 aa9.48□□□□□ -0.89
HMGCL-202ENST00000374487 OR2J3O76001 311 aa9.48□□□□□ -0.89
HMGCL-202ENST00000374487 APCSP02743 223 aa9.48□□□□□ -0.89
HMGCL-202ENST00000374487 TPPP2P59282 170 aa9.48□□□□□ -0.89
HMGCL-202ENST00000374487 PKIAP61925 76 aa9.48□□□□□ -0.89
HMGCL-202ENST00000374487 KIAA1644Q3SXP7 199 aa9.48□□□□□ -0.89
HMGCL-202ENST00000374487 C9orf152Q5JTZ5 239 aa9.48□□□□□ -0.89
HMGCL-202ENST00000374487 FAM120AOSQ5T036 256 aa9.48□□□□□ -0.89
HMGCL-202ENST00000374487 GOLT1AQ6ZVE7 132 aa9.48□□□□□ -0.89
HMGCL-202ENST00000374487 Q8N9W7 124 aa9.48□□□□□ -0.89
HMGCL-202ENST00000374487 NUP35Q8NFH5 326 aa9.48□□□□□ -0.89
HMGCL-202ENST00000374487 MLST8Q9BVC4 326 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms