RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 FNDC10F2Z333 226 aa11.35□□□□□ -0.59
CDH3-201ENST00000264012 PPBPP02775 128 aa11.35□□□□□ -0.59
CDH3-201ENST00000264012 STHQ8IWL8 128 aa11.35□□□□□ -0.59
CDH3-201ENST00000264012 TMEM190Q8WZ59 177 aa11.35□□□□□ -0.59
CDH3-201ENST00000264012 TRGV2A0A075B6R0 118 aa11.35□□□□□ -0.59
CDH3-201ENST00000264012 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.35□□□□□ -0.59
CDH3-201ENST00000264012 LINC00614P0C842 121 aa11.35□□□□□ -0.59
CDH3-201ENST00000264012 MST1LQ2TV78 715 aa11.35□□□□□ -0.59
CDH3-201ENST00000264012 GFI1BQ5VTD9 330 aa11.35□□□□□ -0.59
CDH3-201ENST00000264012 ATP5L2Q7Z4Y8 100 aa11.35□□□□□ -0.59
CDH3-201ENST00000264012 NCOR1P1Q9H4R4 102 aa11.35□□□□□ -0.59
CDH3-201ENST00000264012 SELENOKQ9Y6D0 94 aa11.35□□□□□ -0.59
CDH3-201ENST00000264012 PRSS33Q8NF86 280 aa11.35□□□□□ -0.59
CDH3-201ENST00000264012 OR5AN1Q8NGI8 311 aa11.35□□□□□ -0.59
CDH3-201ENST00000264012 IGLV3-9A0A075B6K5 115 aa11.35□□□□□ -0.59
CDH3-201ENST00000264012 RNF138Q8WVD3 245 aa11.35□□□□□ -0.59
CDH3-201ENST00000264012 DKK1O94907 266 aa11.34□□□□□ -0.59
CDH3-201ENST00000264012 EMP1P54849 157 aa11.34□□□□□ -0.59
CDH3-201ENST00000264012 C2orf88Q9BSF0 95 aa11.34□□□□□ -0.59
CDH3-201ENST00000264012 TRBV7-1A0A0A6YYK4 115 aa11.34□□□□□ -0.59
CDH3-201ENST00000264012 F2Z2F3 143 aa11.34□□□□□ -0.59
CDH3-201ENST00000264012 WT1P19544 449 aaPredicted RBP11.34□□□□□ -0.59
CDH3-201ENST00000264012 WFDC12Q8WWY7 111 aa11.34□□□□□ -0.59
CDH3-201ENST00000264012 CFHR2P36980 270 aa11.34□□□□□ -0.59
CDH3-201ENST00000264012 TMEM14BQ9NUH8 114 aa11.34□□□□□ -0.59
CDH3-201ENST00000264012 C17orf58Q2M2W7 97 aa11.34□□□□□ -0.59
CDH3-201ENST00000264012 TMEM101Q96IK0 257 aa11.34□□□□□ -0.59
CDH3-201ENST00000264012 LOXP28300 417 aaPredicted RBP11.33□□□□□ -0.6
CDH3-201ENST00000264012 CACNG7P62955 275 aa11.33□□□□□ -0.6
CDH3-201ENST00000264012 NDPQ00604 133 aa11.33□□□□□ -0.6
CDH3-201ENST00000264012 C1orf194Q5T5A4 169 aa11.33□□□□□ -0.6
CDH3-201ENST00000264012 SPG11Q96JI7 2443 aa11.33□□□□□ -0.6
CDH3-201ENST00000264012 WIPF3A6NGB9 483 aa11.33□□□□□ -0.6
CDH3-201ENST00000264012 IGKV1-39P01597 117 aa11.33□□□□□ -0.6
CDH3-201ENST00000264012 IGKV1D-39P04432 117 aa11.33□□□□□ -0.6
CDH3-201ENST00000264012 C10orf91Q5T1B1 145 aa11.33□□□□□ -0.6
CDH3-201ENST00000264012 ST20Q9HBF5 79 aa11.33□□□□□ -0.6
CDH3-201ENST00000264012 NXT2Q9NPJ8 142 aaKnown RBP11.33□□□□□ -0.6
CDH3-201ENST00000264012 HBDP02042 147 aa11.33□□□□□ -0.6
CDH3-201ENST00000264012 SLC25A16P16260 332 aa11.33□□□□□ -0.6
CDH3-201ENST00000264012 PAX9P55771 341 aa11.33□□□□□ -0.6
CDH3-201ENST00000264012 NIT1Q86X76 327 aa11.33□□□□□ -0.6
CDH3-201ENST00000264012 TTC9CQ8N5M4 171 aa11.33□□□□□ -0.6
CDH3-201ENST00000264012 SRSF8Q9BRL6 282 aaKnown RBP11.33□□□□□ -0.6
CDH3-201ENST00000264012 ZNF329Q86UD4 541 aa11.33□□□□□ -0.6
CDH3-201ENST00000264012 COPS9Q8WXC6 57 aa11.33□□□□□ -0.6
CDH3-201ENST00000264012 LY96Q9Y6Y9 160 aa11.33□□□□□ -0.6
CDH3-201ENST00000264012 TRAV8-1A0A0A6YYK1 113 aa11.32□□□□□ -0.6
CDH3-201ENST00000264012 ZNF562Q6V9R5 426 aa11.32□□□□□ -0.6
CDH3-201ENST00000264012 TECTAO75443 2155 aa11.32□□□□□ -0.6
CDH3-201ENST00000264012 PTPRQQ9UMZ3 2332 aa11.32□□□□□ -0.6
CDH3-201ENST00000264012 TOMM40O96008 361 aa11.32□□□□□ -0.6
CDH3-201ENST00000264012 FAM90A2PQ658T7 463 aa11.32□□□□□ -0.6
CDH3-201ENST00000264012 C9orf139Q6ZV77 190 aa11.32□□□□□ -0.6
CDH3-201ENST00000264012 MRPL52Q86TS9 123 aaKnown RBP11.32□□□□□ -0.6
CDH3-201ENST00000264012 TEX36Q5VZQ5 186 aa11.32□□□□□ -0.6
CDH3-201ENST00000264012 Q8TAT8 98 aa11.31□□□□□ -0.6
CDH3-201ENST00000264012 USMG5Q96IX5 58 aa11.31□□□□□ -0.6
CDH3-201ENST00000264012 C15orf65H3BRN8 121 aa11.31□□□□□ -0.6
CDH3-201ENST00000264012 NDUFS8O00217 210 aa11.31□□□□□ -0.6
CDH3-201ENST00000264012 EVI2AP22794 236 aa11.31□□□□□ -0.6
CDH3-201ENST00000264012 UBE2E1P51965 193 aa11.31□□□□□ -0.6
CDH3-201ENST00000264012 ZNF138P52744 262 aa11.31□□□□□ -0.6
CDH3-201ENST00000264012 NDUFA3O95167 84 aa11.31□□□□□ -0.6
CDH3-201ENST00000264012 ZNF688P0C7X2 276 aa11.31□□□□□ -0.6
CDH3-201ENST00000264012 ZNF833PQ6ZTB9 187 aa11.31□□□□□ -0.6
CDH3-201ENST00000264012 NDUFA4L2Q9NRX3 87 aa11.31□□□□□ -0.6
CDH3-201ENST00000264012 CNTFRP26992 372 aa11.31□□□□□ -0.6
CDH3-201ENST00000264012 SRSF1Q07955 248 aaKnown RBP eCLIP11.31□□□□□ -0.6
CDH3-201ENST00000264012 DOCK11Q5JSL3 2073 aa11.31□□□□□ -0.6
CDH3-201ENST00000264012 TRAV9-2A0A087WT02 112 aa11.3□□□□□ -0.6
CDH3-201ENST00000264012 LYPD1Q8N2G4 141 aa11.3□□□□□ -0.6
CDH3-201ENST00000264012 MRAP2Q96G30 205 aa11.3□□□□□ -0.6
CDH3-201ENST00000264012 TRGV11A0A075B6L2 103 aa11.3□□□□□ -0.6
CDH3-201ENST00000264012 SMIM13P0DJ93 91 aa11.3□□□□□ -0.6
CDH3-201ENST00000264012 TDGF1P13385 188 aa11.3□□□□□ -0.6
CDH3-201ENST00000264012 LINC01356Q8N9X3 169 aa11.3□□□□□ -0.6
CDH3-201ENST00000264012 NOTCH2Q04721 2471 aa11.3□□□□□ -0.6
CDH3-201ENST00000264012 TMEM8BA6NDV4 472 aa11.3□□□□□ -0.6
CDH3-201ENST00000264012 IGFL4Q6B9Z1 124 aa11.3□□□□□ -0.6
CDH3-201ENST00000264012 LCN12Q6JVE5 192 aa11.3□□□□□ -0.6
CDH3-201ENST00000264012 CACNA1AO00555 2505 aa11.3□□□□□ -0.6
CDH3-201ENST00000264012 A6NNC1 897 aa11.3□□□□□ -0.6
CDH3-201ENST00000264012 C9JQL5 133 aa11.3□□□□□ -0.6
CDH3-201ENST00000264012 ALKBH7Q9BT30 221 aaPredicted RBP11.3□□□□□ -0.6
CDH3-201ENST00000264012 MMP23AO75900 390 aa11.29□□□□□ -0.6
CDH3-201ENST00000264012 MSMBP08118 114 aa11.29□□□□□ -0.6
CDH3-201ENST00000264012 PRR31Q5SQ13 230 aa11.29□□□□□ -0.6
CDH3-201ENST00000264012 CHCHD1Q96BP2 118 aaKnown RBP11.29□□□□□ -0.6
CDH3-201ENST00000264012 CUL9Q8IWT3 2517 aa11.29□□□□□ -0.6
CDH3-201ENST00000264012 ZNF134P52741 427 aa11.29□□□□□ -0.6
CDH3-201ENST00000264012 PSG3Q16557 428 aa11.29□□□□□ -0.6
CDH3-201ENST00000264012 RUSC1-AS1Q66K80 236 aa11.29□□□□□ -0.6
CDH3-201ENST00000264012 LYZL1Q6UWQ5 148 aa11.29□□□□□ -0.6
CDH3-201ENST00000264012 PIP4P2Q8N4L2 257 aa11.29□□□□□ -0.6
CDH3-201ENST00000264012 PLXNB3Q9ULL4 1909 aa11.29□□□□□ -0.6
CDH3-201ENST00000264012 FAM223BA6NKX1 122 aa11.29□□□□□ -0.6
CDH3-201ENST00000264012 HTN3P15516 51 aa11.29□□□□□ -0.6
CDH3-201ENST00000264012 NSUN5P1Q3KNT7 163 aa11.29□□□□□ -0.6
CDH3-201ENST00000264012 FAM223AQ8IWN6 122 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms