RNA–Protein interactions for RNA: snR61

snR61, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR61, Length 90 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR61	snR61	EFR3	Q03653	782 aa	Known RBP	0.84	□□□□□ -2.27
snR61	snR61	FMP42	Q04991	504 aa		0.84	□□□□□ -2.27
snR61	snR61	TOM70	P07213	617 aa	Known RBP	0.83	□□□□□ -2.28
snR61	snR61	RPL8B	P29453	256 aa	Known RBP	0.83	□□□□□ -2.28
snR61	snR61	RKM3	P38222	552 aa		0.83	□□□□□ -2.28
snR61	snR61	MTC6	P38849	526 aa		0.83	□□□□□ -2.28
snR61	snR61	SAP4	P53036	818 aa		0.83	□□□□□ -2.28
snR61	snR61	PCL10	P53124	433 aa		0.83	□□□□□ -2.28
snR61	snR61	RPS15	Q01855	142 aa	Known RBP	0.83	□□□□□ -2.28
snR61	snR61	VTC3	Q02725	835 aa		0.83	□□□□□ -2.28
snR61	snR61	TDA5	Q06417	326 aa	Known RBP	0.83	□□□□□ -2.28
snR61	snR61	PIN2	Q12057	282 aa		0.83	□□□□□ -2.28
snR61	snR61	YER175W-A	Q8TGU4	54 aa		0.83	□□□□□ -2.28
snR61	snR61	CET1	O13297	549 aa	Predicted RBP	0.82	□□□□□ -2.28
snR61	snR61	CDC23	P16522	626 aa		0.82	□□□□□ -2.28
snR61	snR61	ARE1	P25628	610 aa		0.82	□□□□□ -2.28
snR61	snR61	MNN1	P39106	762 aa		0.82	□□□□□ -2.28
snR61	snR61	ERP6	P53198	216 aa		0.82	□□□□□ -2.28
snR61	snR61	BRE5	P53741	515 aa	Known RBP	0.82	□□□□□ -2.28
snR61	snR61	CYK3	Q07533	885 aa		0.82	□□□□□ -2.28
snR61	snR61	YKR018C	P36114	725 aa		0.81	□□□□□ -2.28
snR61	snR61	YPT10	P38146	199 aa		0.81	□□□□□ -2.28
snR61	snR61	BRN1	P38170	754 aa		0.81	□□□□□ -2.28
snR61	snR61	YHR218W	P38899	603 aa		0.81	□□□□□ -2.28
snR61	snR61	MAD1	P40957	749 aa		0.81	□□□□□ -2.28
snR61	snR61	YPT11	P48559	417 aa		0.81	□□□□□ -2.28
snR61	snR61	YLR281C	Q05863	155 aa		0.81	□□□□□ -2.28
snR61	snR61	GSH2	Q08220	491 aa		0.81	□□□□□ -2.28
snR61	snR61	PFA4	Q12006	378 aa		0.81	□□□□□ -2.28
snR61	snR61	PNO1	Q99216	274 aa	Known RBP	0.81	□□□□□ -2.28
snR61	snR61	SEC18	P18759	758 aa	Known RBP	0.8	□□□□□ -2.28
snR61	snR61	MAK32	P23060	363 aa		0.8	□□□□□ -2.28
snR61	snR61	SEC1	P30619	724 aa	Known RBP	0.8	□□□□□ -2.28
snR61	snR61	BZZ1	P38822	633 aa		0.8	□□□□□ -2.28
snR61	snR61	CIN1	P40987	1014 aa		0.8	□□□□□ -2.28
snR61	snR61	GPN2	Q08726	347 aa	Predicted RBP	0.8	□□□□□ -2.28
snR61	snR61	TGS1	Q12052	315 aa		0.8	□□□□□ -2.28
snR61	snR61	YML002W	P0CF17	737 aa		0.79	□□□□□ -2.28
snR61	snR61	CBS2	P14905	389 aa		0.79	□□□□□ -2.28
snR61	snR61	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	0.79	□□□□□ -2.28	not detected
snR61	snR61	FTH1	P38310	465 aa		0.79	□□□□□ -2.28
snR61	snR61	YGR054W	P53235	642 aa	Known RBP	0.79	□□□□□ -2.28
snR61	snR61	SVF1	Q05515	481 aa		0.79	□□□□□ -2.28
snR61	snR61	ECM22	Q05958	814 aa	Predicted RBP	0.79	□□□□□ -2.28
snR61	snR61	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	0.79	□□□□□ -2.28	not detected
snR61	snR61	AHA1	Q12449	350 aa	Known RBP	0.79	□□□□□ -2.28
snR61	snR61	YBR298C-A	Q8TGK4	73 aa		0.79	□□□□□ -2.28
snR61	snR61	ILS1	P09436	1072 aa	Known RBP	0.78	□□□□□ -2.28
snR61	snR61	FRS1	P15624	595 aa	Known RBP	0.78	□□□□□ -2.28
snR61	snR61	MIH1	P23748	554 aa		0.78	□□□□□ -2.28
snR61	snR61	MCD4	P36051	919 aa		0.78	□□□□□ -2.28
snR61	snR61	SPG5	P42933	373 aa		0.78	□□□□□ -2.28
snR61	snR61	TIM50	Q02776	476 aa		0.78	□□□□□ -2.28
snR61	snR61	CEF1	Q03654	590 aa	Predicted RBP	0.78	□□□□□ -2.28
snR61	snR61	YDL124W	Q07551	312 aa	Known RBP	0.78	□□□□□ -2.28
snR61	snR61	VHS3	Q08438	674 aa		0.78	□□□□□ -2.28
snR61	snR61	GET3	Q12154	354 aa	Known RBP	0.78	□□□□□ -2.28
snR61	snR61	RPN10	P38886	268 aa	Known RBP	0.77	□□□□□ -2.29
snR61	snR61	VBA4	Q04602	768 aa	Known RBP	0.77	□□□□□ -2.29
snR61	snR61	SPO75	Q07798	868 aa		0.77	□□□□□ -2.29
snR61	snR61	RRI1	Q12468	440 aa		0.77	□□□□□ -2.29
snR61	snR61	YOR131C	Q12486	218 aa		0.77	□□□□□ -2.29
snR61	snR61	CYB2	P00175	591 aa		0.76	□□□□□ -2.29
snR61	snR61	CNA1	P23287	553 aa		0.76	□□□□□ -2.29
snR61	snR61	NAP1	P25293	417 aa	Known RBP	0.76	□□□□□ -2.29
snR61	snR61	GSH1	P32477	678 aa		0.76	□□□□□ -2.29
snR61	snR61	PET127	P32606	800 aa		0.76	□□□□□ -2.29
snR61	snR61	YHR202W	P38887	602 aa		0.76	□□□□□ -2.29
snR61	snR61	CUL3	P53202	744 aa		0.76	□□□□□ -2.29
snR61	snR61	IGO1	P53897	168 aa		0.76	□□□□□ -2.29
snR61	snR61	RCR2	Q03446	210 aa	Known RBP	0.76	□□□□□ -2.29
snR61	snR61	BET3	P36149	193 aa		0.75	□□□□□ -2.29
snR61	snR61	CCL1	P37366	393 aa		0.75	□□□□□ -2.29
snR61	snR61	YJL070C	P40361	888 aa		0.75	□□□□□ -2.29
snR61	snR61	QRI7	P43122	407 aa		0.75	□□□□□ -2.29
snR61	snR61	HOP1	P20050	605 aa		0.74	□□□□□ -2.29
snR61	snR61	HXT1	P32465	570 aa		0.74	□□□□□ -2.29
snR61	snR61	MTC2	P34246	357 aa		0.74	□□□□□ -2.29
snR61	snR61	MNN4	P36044	1178 aa		0.74	□□□□□ -2.29
snR61	snR61	SSZ1	P38788	538 aa	Known RBP	0.74	□□□□□ -2.29
snR61	snR61	PCL6	P40038	420 aa		0.74	□□□□□ -2.29
snR61	snR61	YNL144C	P53907	740 aa		0.74	□□□□□ -2.29
snR61	snR61	FDC1	Q03034	503 aa		0.74	□□□□□ -2.29
snR61	snR61	TAF8	Q03750	510 aa		0.74	□□□□□ -2.29
snR61	snR61	YPS7	Q06325	596 aa		0.74	□□□□□ -2.29
snR61	snR61	TAH18	Q12181	623 aa		0.74	□□□□□ -2.29
snR61	snR61	PMS1	P14242	873 aa		0.73	□□□□□ -2.29
snR61	snR61	HEM3	P28789	327 aa		0.73	□□□□□ -2.29
snR61	snR61	PRO3	P32263	286 aa	Known RBP	0.73	□□□□□ -2.29
snR61	snR61	ASF1	P32447	279 aa		0.73	□□□□□ -2.29
snR61	snR61	PTH1	P38876	190 aa	Known RBP	0.73	□□□□□ -2.29
snR61	snR61	HUL4	P40985	892 aa		0.73	□□□□□ -2.29
snR61	snR61	RBG2	P53295	368 aa	Known RBP	0.73	□□□□□ -2.29
snR61	snR61	ARA2	Q04212	335 aa		0.73	□□□□□ -2.29
snR61	snR61	CIT1	P00890	479 aa		0.72	□□□□□ -2.29
snR61	snR61	AAC1	P04710	309 aa		0.72	□□□□□ -2.29
snR61	snR61	HSP60	P19882	572 aa	Known RBP	0.72	□□□□□ -2.29
snR61	snR61	PRP22	P24384	1145 aa	Known RBP	0.72	□□□□□ -2.29
snR61	snR61	CAP1	P28495	268 aa	Known RBP	0.72	□□□□□ -2.29
snR61	snR61	DHR2	P36009	735 aa	Predicted RBP	0.72	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 52.9 ms