RNA–Protein interactions for RNA: snR49

snR49, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR49, Length 165 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR49snR49 DUN1P39009 513 aa2.25□□□□□ -2.05
snR49snR49 YEL076CP39971 216 aa2.25□□□□□ -2.05
snR49snR49 FTR1P40088 404 aa2.25□□□□□ -2.05
snR49snR49 WAR1Q03631 944 aa2.25□□□□□ -2.05
snR49snR49 GFD1Q04839 188 aaKnown RBP2.25□□□□□ -2.05
snR49snR49 AIM44Q99299 758 aa2.25□□□□□ -2.05
snR49snR49 PHO2P07269 559 aa2.24□□□□□ -2.05
snR49snR49 HOP1P20050 605 aa2.24□□□□□ -2.05
snR49snR49 SFL1P20134 766 aa2.24□□□□□ -2.05
snR49snR49 AIM17P23180 465 aaKnown RBP2.24□□□□□ -2.05
snR49snR49 SSD1P24276 1250 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
snR49snR49 YJU2P28320 278 aaPredicted RBP2.24□□□□□ -2.05
snR49snR49 PRE4P30657 266 aa2.24□□□□□ -2.05
snR49snR49 TIM23P32897 222 aa2.24□□□□□ -2.05
snR49snR49 BRN1P38170 754 aa2.24□□□□□ -2.05
snR49snR49 IRC7P43623 340 aa2.24□□□□□ -2.05
snR49snR49 HRD3Q05787 833 aa2.24□□□□□ -2.05
snR49snR49 STP4Q07351 490 aa2.24□□□□□ -2.05
snR49snR49 PCL8Q08966 492 aa2.24□□□□□ -2.05
snR49snR49 TGS1Q12052 315 aa2.24□□□□□ -2.05
snR49snR49 LOT5P34234 306 aa2.23□□□□□ -2.05
snR49snR49 DED81P38707 554 aaKnown RBP2.23□□□□□ -2.05
snR49snR49 YPL071CQ02864 156 aa2.23□□□□□ -2.05
snR49snR49 HLR1Q04429 423 aa2.23□□□□□ -2.05
snR49snR49 PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
snR49snR49 ACO1P19414 778 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
snR49snR49 DHR2P36009 735 aaPredicted RBP2.22□□□□□ -2.05
snR49snR49 CCL1P37366 393 aa2.22□□□□□ -2.05
snR49snR49 GND1P38720 489 aaKnown RBP2.22□□□□□ -2.05
snR49snR49 YIL092WP40497 633 aa2.22□□□□□ -2.05
snR49snR49 MDV1P47025 714 aa2.22□□□□□ -2.05
snR49snR49 USA1Q03714 838 aa2.22□□□□□ -2.05
snR49snR49 PPN1Q04119 674 aa2.22□□□□□ -2.05
snR49snR49 ARR3Q06598 404 aa2.22□□□□□ -2.05
snR49snR49 NRT1Q08485 598 aa2.22□□□□□ -2.05
snR49snR49 MRN1Q08925 612 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
snR49snR49 YCR043CP25361 127 aa2.21□□□□□ -2.06
snR49snR49 MSH2P25847 964 aa2.21□□□□□ -2.06
snR49snR49 CAP1P28495 268 aaKnown RBP2.21□□□□□ -2.06
snR49snR49 YEL025CP39991 1188 aa2.21□□□□□ -2.06
snR49snR49 YIL152WP40455 235 aa2.21□□□□□ -2.06
snR49snR49 YGL260WP53056 76 aa2.21□□□□□ -2.06
snR49snR49 UGO1Q03327 502 aa2.21□□□□□ -2.06
snR49snR49 YOR131CQ12486 218 aa2.21□□□□□ -2.06
snR49snR49 SWI6P09959 803 aa2.2□□□□□ -2.06
snR49snR49 COQ3P27680 312 aa2.2□□□□□ -2.06
snR49snR49 YOX1P34161 385 aa2.2□□□□□ -2.06
snR49snR49 SDS24P38314 527 aa2.2□□□□□ -2.06
snR49snR49 MTG2P38860 518 aa2.2□□□□□ -2.06
snR49snR49 YIR016WP40572 265 aa2.2□□□□□ -2.06
snR49snR49 TES1P41903 349 aaKnown RBP2.2□□□□□ -2.06
snR49snR49 TAF4P50105 388 aa2.2□□□□□ -2.06
snR49snR49 BOP3P53958 396 aa2.2□□□□□ -2.06
snR49snR49 AAT1Q01802 451 aa2.2□□□□□ -2.06
snR49snR49 RPS17AP02407 136 aaKnown RBP2.19□□□□□ -2.06
snR49snR49 BI2P03873 423 aa2.19□□□□□ -2.06
snR49snR49 RPS17BP14127 136 aaKnown RBP2.19□□□□□ -2.06
snR49snR49 EHT1P38295 451 aa2.19□□□□□ -2.06
snR49snR49 LRO1P40345 661 aa2.19□□□□□ -2.06
snR49snR49 PRM2P40534 656 aa2.19□□□□□ -2.06
snR49snR49 BFA1P47113 574 aa2.19□□□□□ -2.06
snR49snR49 GRS2Q06817 618 aa2.19□□□□□ -2.06
snR49snR49 CYK3Q07533 885 aa2.19□□□□□ -2.06
snR49snR49 UBX3Q12229 455 aa2.19□□□□□ -2.06
snR49snR49 GAL4P04386 881 aa2.18□□□□□ -2.06
snR49snR49 AAC1P04710 309 aa2.18□□□□□ -2.06
snR49snR49 MAK32P23060 363 aa2.18□□□□□ -2.06
snR49snR49 MTC7P32633 139 aa2.18□□□□□ -2.06
snR49snR49 RPT3P33298 428 aaKnown RBP2.18□□□□□ -2.06
snR49snR49 IMD2P38697 523 aaKnown RBP2.18□□□□□ -2.06
snR49snR49 NUP82P40368 713 aa2.18□□□□□ -2.06
snR49snR49 IMD3P50095 523 aaKnown RBP2.18□□□□□ -2.06
snR49snR49 MET13P53128 600 aa2.18□□□□□ -2.06
snR49snR49 NOP15P53927 220 aaPredicted RBP2.18□□□□□ -2.06
snR49snR49 NSE5Q03718 556 aa2.18□□□□□ -2.06
snR49snR49 GUD1Q07729 489 aa2.18□□□□□ -2.06
snR49snR49 AHA1Q12449 350 aaKnown RBP2.18□□□□□ -2.06
snR49snR49 PBP2P38151 413 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
snR49snR49 ARC40P38328 384 aaKnown RBP2.17□□□□□ -2.06
snR49snR49 RTT107P38850 1070 aa2.17□□□□□ -2.06
snR49snR49 BUD6P41697 788 aa2.17□□□□□ -2.06
snR49snR49 IES1P43579 692 aa2.17□□□□□ -2.06
snR49snR49 YDL183CP48569 320 aa2.17□□□□□ -2.06
snR49snR49 RPN4Q03465 531 aa2.17□□□□□ -2.06
snR49snR49 YLR001CQ07895 862 aa2.17□□□□□ -2.06
snR49snR49 DSE3Q08729 430 aa2.17□□□□□ -2.06
snR49snR49 ATX2Q12067 313 aa2.17□□□□□ -2.06
snR49snR49 PNO1Q99216 274 aaKnown RBP2.17□□□□□ -2.06
snR49snR49 CET1O13297 549 aaPredicted RBP2.16□□□□□ -2.06
snR49snR49 YPK1P12688 680 aaKnown RBP2.16□□□□□ -2.06
snR49snR49 MET30P39014 640 aa2.16□□□□□ -2.06
snR49snR49 SNU56Q03782 492 aaKnown RBP2.16□□□□□ -2.06
snR49snR49 YMR034CQ05131 434 aaPredicted RBP2.16□□□□□ -2.06
snR49snR49 YCG1Q06680 1035 aa2.16□□□□□ -2.06
snR49snR49 YLR125WQ12138 136 aa2.16□□□□□ -2.06
snR49snR49 YMR230W-AQ3E7B5 62 aa2.16□□□□□ -2.06
snR49snR49 PHO8P11491 566 aa2.15□□□□□ -2.07
snR49snR49 FMP46P36141 133 aaKnown RBP2.15□□□□□ -2.07
snR49snR49 CIN1P40987 1014 aa2.15□□□□□ -2.07
snR49snR49 YNL092WP53934 400 aa2.15□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 63.1 ms