RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR47, Length 99 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR47snR47 RRP15Q06511 250 aaPredicted RBP0.36□□□□□ -2.35
snR47snR47 PCL8Q08966 492 aa0.36□□□□□ -2.35
snR47snR47 CNA1P23287 553 aa0.35□□□□□ -2.35
snR47snR47 SSD1P24276 1250 aaKnown RBP RIP-Chip data0.35□□□□□ -2.35not detected
snR47snR47 YPT10P38146 199 aa0.35□□□□□ -2.35
snR47snR47 IMD2P38697 523 aaKnown RBP0.35□□□□□ -2.35
snR47snR47 CIN1P40987 1014 aa0.35□□□□□ -2.35
snR47snR47 POL32P47110 350 aa0.35□□□□□ -2.35
snR47snR47 YPT11P48559 417 aa0.35□□□□□ -2.35
snR47snR47 IMD3P50095 523 aaKnown RBP0.35□□□□□ -2.35
snR47snR47 YGL242CP53066 181 aa0.35□□□□□ -2.35
snR47snR47 RNY1Q02933 434 aaKnown RBP0.35□□□□□ -2.35
snR47snR47 WAR1Q03631 944 aa0.35□□□□□ -2.35
snR47snR47 EFR3Q03653 782 aaKnown RBP0.35□□□□□ -2.35
snR47snR47 SNU56Q03782 492 aaKnown RBP0.35□□□□□ -2.35
snR47snR47 CYK3Q07533 885 aa0.35□□□□□ -2.35
snR47snR47 MET7Q08645 548 aa0.35□□□□□ -2.35
snR47snR47 TAH18Q12181 623 aa0.35□□□□□ -2.35
snR47snR47 HBN1Q96VH4 193 aa0.35□□□□□ -2.35
snR47snR47 BUD14P27637 709 aa0.34□□□□□ -2.36
snR47snR47 PRS1P32895 427 aaKnown RBP0.34□□□□□ -2.36
snR47snR47 STE5P32917 917 aa0.34□□□□□ -2.36
snR47snR47 BRN1P38170 754 aa0.34□□□□□ -2.36
snR47snR47 FTH1P38310 465 aa0.34□□□□□ -2.36
snR47snR47 EFM2P38347 419 aa0.34□□□□□ -2.36
snR47snR47 YJR061WP40355 935 aa0.34□□□□□ -2.36
snR47snR47 QRI7P43122 407 aa0.34□□□□□ -2.36
snR47snR47 BIT61P47041 543 aa0.34□□□□□ -2.36
snR47snR47 CEF1Q03654 590 aaPredicted RBP0.34□□□□□ -2.36
snR47snR47 OPI10Q08202 246 aa0.34□□□□□ -2.36
snR47snR47 APL5Q08951 932 aaKnown RBP0.34□□□□□ -2.36
snR47snR47 YPL216WQ08964 1102 aa0.34□□□□□ -2.36
snR47snR47 YLL056CQ12177 298 aa0.34□□□□□ -2.36
snR47snR47 PNO1Q99216 274 aaKnown RBP0.34□□□□□ -2.36
snR47snR47 SEC18P18759 758 aaKnown RBP0.33□□□□□ -2.36
snR47snR47 MNN1P39106 762 aa0.33□□□□□ -2.36
snR47snR47 UBP6P43593 499 aaKnown RBP0.33□□□□□ -2.36
snR47snR47 UTP8P53276 713 aaKnown RBP0.33□□□□□ -2.36
snR47snR47 MFM1Q02783 413 aa0.33□□□□□ -2.36
snR47snR47 LEE1Q02799 301 aaKnown RBP0.33□□□□□ -2.36
snR47snR47 SEN54Q02825 467 aaPredicted RBP0.33□□□□□ -2.36
snR47snR47 ARA2Q04212 335 aa0.33□□□□□ -2.36
snR47snR47 TGS1Q12052 315 aa0.33□□□□□ -2.36
snR47snR47 BI3Q9ZZW7 517 aa0.33□□□□□ -2.36
snR47snR47 ILS1P09436 1072 aaKnown RBP0.32□□□□□ -2.36
snR47snR47 KIN82P25341 720 aa0.32□□□□□ -2.36
snR47snR47 MNN2P38069 597 aa0.32□□□□□ -2.36
snR47snR47 SMK1P41808 388 aa0.32□□□□□ -2.36
snR47snR47 SET2P46995 733 aaKnown RBP0.32□□□□□ -2.36
snR47snR47 ALY2P47029 1046 aa0.32□□□□□ -2.36
snR47snR47 RPN7Q06103 429 aaKnown RBP0.32□□□□□ -2.36
snR47snR47 PFA4Q12006 378 aa0.32□□□□□ -2.36
snR47snR47 PPT2Q12036 173 aa0.32□□□□□ -2.36
snR47snR47 RRI1Q12468 440 aa0.32□□□□□ -2.36
snR47snR47 Q0142Q9ZZW4 58 aa0.32□□□□□ -2.36
snR47snR47 HOP1P20050 605 aa0.31□□□□□ -2.36
snR47snR47 SEC15P22224 910 aa0.31□□□□□ -2.36
snR47snR47 SWC3P31376 625 aa0.31□□□□□ -2.36
snR47snR47 YKR018CP36114 725 aa0.31□□□□□ -2.36
snR47snR47 APN2P38207 520 aa0.31□□□□□ -2.36
snR47snR47 PPE1P38796 400 aa0.31□□□□□ -2.36
snR47snR47 ALR2P43553 858 aa0.31□□□□□ -2.36
snR47snR47 YNL058CP53947 316 aa0.31□□□□□ -2.36
snR47snR47 ARP4P80428 489 aa0.31□□□□□ -2.36
snR47snR47 MRN1Q08925 612 aaKnown RBP RIP-Chip data0.31□□□□□ -2.36not detected
snR47snR47 TOM70P07213 617 aaKnown RBP0.3□□□□□ -2.36
snR47snR47 RAD4P14736 754 aa0.3□□□□□ -2.36
snR47snR47 RPS2P25443 254 aaKnown RBP0.3□□□□□ -2.36
snR47snR47 PER1P25625 357 aa0.3□□□□□ -2.36
snR47snR47 PRO3P32263 286 aaKnown RBP0.3□□□□□ -2.36
snR47snR47 TIF4631P39935 952 aaKnown RBP0.3□□□□□ -2.36
snR47snR47 YFL052WP43551 465 aa0.3□□□□□ -2.36
snR47snR47 MAL11P53048 616 aa0.3□□□□□ -2.36
snR47snR47 PCL10P53124 433 aa0.3□□□□□ -2.36
snR47snR47 YGL039WP53183 348 aaKnown RBP0.3□□□□□ -2.36
snR47snR47 FDC1Q03034 503 aa0.3□□□□□ -2.36
snR47snR47 YMR210WQ03649 449 aa0.3□□□□□ -2.36
snR47snR47 USA1Q03714 838 aa0.3□□□□□ -2.36
snR47snR47 COG8Q04632 607 aa0.3□□□□□ -2.36
snR47snR47 YMR254CQ04838 102 aa0.3□□□□□ -2.36
snR47snR47 ECM22Q05958 814 aaPredicted RBP0.3□□□□□ -2.36
snR47snR47 DIN7Q12086 430 aa0.3□□□□□ -2.36
snR47snR47 DAP1Q12091 152 aa0.3□□□□□ -2.36
snR47snR47 AAC1P04710 309 aa0.29□□□□□ -2.36
snR47snR47 HNM1P19807 563 aa0.29□□□□□ -2.36
snR47snR47 NIC96P34077 839 aa0.29□□□□□ -2.36
snR47snR47 KES1P35844 434 aaKnown RBP0.29□□□□□ -2.36
snR47snR47 CCL1P37366 393 aa0.29□□□□□ -2.36
snR47snR47 TMN3P40071 706 aa0.29□□□□□ -2.36
snR47snR47 YGR054WP53235 642 aaKnown RBP0.29□□□□□ -2.36
snR47snR47 BRE5P53741 515 aaKnown RBP0.29□□□□□ -2.36
snR47snR47 YML020WQ03722 664 aa0.29□□□□□ -2.36
snR47snR47 FMP25Q08023 583 aa0.29□□□□□ -2.36
snR47snR47 AHA1Q12449 350 aaKnown RBP0.29□□□□□ -2.36
snR47snR47 GLN4P13188 809 aaKnown RBP0.28□□□□□ -2.36
snR47snR47 PDA1P16387 420 aaKnown RBP0.28□□□□□ -2.36
snR47snR47 SPR1P32603 445 aa0.28□□□□□ -2.36
snR47snR47 YEL045CP32616 141 aa0.28□□□□□ -2.36
snR47snR47 YKR051WP36142 418 aa0.28□□□□□ -2.36
snR47snR47 RAD26P40352 1085 aa0.28□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 73.5 ms