RNA–Protein interactions for RNA: YPR066W

UBA3, Transcript of Protein that activates Rub1p (NEDD8) before neddylation, yeast

Gene UBA3, Length 900 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBA3	YPR066W	DUN1	P39009	513 aa		5.95	□□□□□ -1.46
UBA3	YPR066W	PLB1	P39105	664 aa		5.95	□□□□□ -1.46
UBA3	YPR066W	ACA1	P39970	489 aa		5.95	□□□□□ -1.46
UBA3	YPR066W	ASK10	P48361	1146 aa		5.95	□□□□□ -1.46
UBA3	YPR066W	MRPS35	P53292	345 aa		5.95	□□□□□ -1.46
UBA3	YPR066W	RCR2	Q03446	210 aa	Known RBP	5.95	□□□□□ -1.46
UBA3	YPR066W	PEX19	Q07418	342 aa		5.95	□□□□□ -1.46
UBA3	YPR066W	BRE1	Q07457	700 aa	Known RBP	5.95	□□□□□ -1.46
UBA3	YPR066W	VHS3	Q08438	674 aa		5.95	□□□□□ -1.46
UBA3	YPR066W	NUR1	Q12066	484 aa		5.95	□□□□□ -1.46
UBA3	YPR066W	FIG2	P25653	1609 aa		5.95	□□□□□ -1.46
UBA3	YPR066W	FAS2	P19097	1887 aa	Known RBP	5.94	□□□□□ -1.46
UBA3	YPR066W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	5.94	□□□□□ -1.46	not detected
UBA3	YPR066W	SWC3	P31376	625 aa		5.94	□□□□□ -1.46
UBA3	YPR066W	DBF20	P32328	564 aa		5.94	□□□□□ -1.46
UBA3	YPR066W	NGG1	P32494	702 aa		5.94	□□□□□ -1.46
UBA3	YPR066W	MRS6	P32864	603 aa	Known RBP	5.94	□□□□□ -1.46
UBA3	YPR066W	YPT7	P32939	208 aa		5.94	□□□□□ -1.46
UBA3	YPR066W	RPP1	P38786	293 aa		5.94	□□□□□ -1.46
UBA3	YPR066W	SPL2	P38839	148 aa		5.94	□□□□□ -1.46
UBA3	YPR066W	SHC1	P39000	512 aa		5.94	□□□□□ -1.46
UBA3	YPR066W	YNL195C	P40168	261 aa		5.94	□□□□□ -1.46
UBA3	YPR066W	INP52	P50942	1183 aa		5.94	□□□□□ -1.46
UBA3	YPR066W	MTD1	Q02046	320 aa	Known RBP	5.94	□□□□□ -1.46
UBA3	YPR066W	HMO1	Q03973	246 aa	Known RBP	5.94	□□□□□ -1.46
UBA3	YPR066W	MCM21	Q06675	368 aa		5.94	□□□□□ -1.46
UBA3	YPR066W	HKR1	P41809	1802 aa		5.94	□□□□□ -1.46
UBA3	YPR066W	YEL076C-A	P0CX16	216 aa		5.93	□□□□□ -1.46
UBA3	YPR066W	YLR464W	P0CX17	216 aa		5.93	□□□□□ -1.46
UBA3	YPR066W	FRS1	P15624	595 aa	Known RBP	5.93	□□□□□ -1.46
UBA3	YPR066W	ERG6	P25087	383 aa	Known RBP	5.93	□□□□□ -1.46
UBA3	YPR066W	PET127	P32606	800 aa		5.93	□□□□□ -1.46
UBA3	YPR066W	RAD24	P32641	659 aa		5.93	□□□□□ -1.46
UBA3	YPR066W	PTH2	P34222	208 aa		5.93	□□□□□ -1.46
UBA3	YPR066W	EXO84	P38261	753 aa		5.93	□□□□□ -1.46
UBA3	YPR066W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	5.93	□□□□□ -1.46	not detected
UBA3	YPR066W	STL1	P39932	569 aa		5.93	□□□□□ -1.46
UBA3	YPR066W	YEL076C	P39971	216 aa		5.93	□□□□□ -1.46
UBA3	YPR066W	PUS4	P48567	403 aa	Known RBP	5.93	□□□□□ -1.46
UBA3	YPR066W	MOT3	P54785	490 aa	Known RBP	5.93	□□□□□ -1.46
UBA3	YPR066W	REC102	Q02721	264 aa		5.93	□□□□□ -1.46
UBA3	YPR066W	YLR224W	Q05947	369 aa		5.93	□□□□□ -1.46
UBA3	YPR066W	IRC3	Q06683	689 aa		5.93	□□□□□ -1.46
UBA3	YPR066W	VPS36	Q06696	566 aa		5.93	□□□□□ -1.46
UBA3	YPR066W	TGL5	Q12043	749 aa		5.93	□□□□□ -1.46
UBA3	YPR066W	FLO11	P08640	1367 aa		5.93	□□□□□ -1.46
UBA3	YPR066W	MRP7	P12687	371 aa		5.92	□□□□□ -1.46
UBA3	YPR066W	PHO3	P24031	467 aa		5.92	□□□□□ -1.46
UBA3	YPR066W	KAR4	P25583	335 aa		5.92	□□□□□ -1.46
UBA3	YPR066W	CTF13	P35203	478 aa		5.92	□□□□□ -1.46
UBA3	YPR066W	ECM1	P39715	212 aa		5.92	□□□□□ -1.46
UBA3	YPR066W	RPT2	P40327	437 aa	Known RBP	5.92	□□□□□ -1.46
UBA3	YPR066W	BUD8	P41698	603 aa		5.92	□□□□□ -1.46
UBA3	YPR066W	SPT20	P50875	604 aa		5.92	□□□□□ -1.46
UBA3	YPR066W	TEP1	P53916	434 aa		5.92	□□□□□ -1.46
UBA3	YPR066W	NRG1	Q03125	231 aa		5.92	□□□□□ -1.46
UBA3	YPR066W	DIB1	Q06819	143 aa	Predicted RBP	5.92	□□□□□ -1.46
UBA3	YPR066W	TRM11	Q12463	433 aa		5.92	□□□□□ -1.46
UBA3	YPR066W	SEC18	P18759	758 aa	Known RBP	5.91	□□□□□ -1.46
UBA3	YPR066W	KRE2	P27809	442 aa		5.91	□□□□□ -1.46
UBA3	YPR066W	PET309	P32522	965 aa	Predicted RBP	5.91	□□□□□ -1.46
UBA3	YPR066W	NUP133	P36161	1157 aa		5.91	□□□□□ -1.46
UBA3	YPR066W	SAW1	P39735	261 aa		5.91	□□□□□ -1.46
UBA3	YPR066W	SCS2	P40075	244 aa	Known RBP	5.91	□□□□□ -1.46
UBA3	YPR066W	TEX1	P53851	422 aa	Known RBP	5.91	□□□□□ -1.46
UBA3	YPR066W	HLR1	Q04429	423 aa		5.91	□□□□□ -1.46
UBA3	YPR066W	PSR2	Q07949	397 aa		5.91	□□□□□ -1.46
UBA3	YPR066W	SGO1	Q08490	590 aa		5.91	□□□□□ -1.46
UBA3	YPR066W	RTK1	Q12100	620 aa	Predicted RBP	5.91	□□□□□ -1.46
UBA3	YPR066W	NKP1	Q12493	238 aa		5.91	□□□□□ -1.46
UBA3	YPR066W	GLT1	Q12680	2145 aa	Known RBP	5.91	□□□□□ -1.46
UBA3	YPR066W	ADH4	P10127	382 aa		5.9	□□□□□ -1.46
UBA3	YPR066W	RNR1	P21524	888 aa	Known RBP	5.9	□□□□□ -1.46
UBA3	YPR066W	TGL1	P34163	548 aa		5.9	□□□□□ -1.46
UBA3	YPR066W	STV1	P37296	890 aa		5.9	□□□□□ -1.46
UBA3	YPR066W	ENP2	P48234	707 aa	Known RBP	5.9	□□□□□ -1.46
UBA3	YPR066W	ECL1	P48235	211 aa		5.9	□□□□□ -1.46
UBA3	YPR066W	TAF4	P50105	388 aa		5.9	□□□□□ -1.46
UBA3	YPR066W	COX18	P53239	316 aa		5.9	□□□□□ -1.46
UBA3	YPR066W	ERG5	P54781	538 aa		5.9	□□□□□ -1.46
UBA3	YPR066W	CIA1	Q05583	330 aa		5.9	□□□□□ -1.46
UBA3	YPR066W	ARP7	Q12406	477 aa		5.9	□□□□□ -1.46
UBA3	YPR066W	GRX6	Q12438	231 aa		5.9	□□□□□ -1.46
UBA3	YPR066W	HRP1	Q99383	534 aa	Known RBP	5.9	□□□□□ -1.46
UBA3	YPR066W	RPS13	P05756	151 aa	Known RBP	5.89	□□□□□ -1.47
UBA3	YPR066W	PHO81	P17442	1178 aa		5.89	□□□□□ -1.47
UBA3	YPR066W	MGM1	P32266	881 aa		5.89	□□□□□ -1.47
UBA3	YPR066W	TSA1	P34760	196 aa	Known RBP	5.89	□□□□□ -1.47
UBA3	YPR066W	SDS22	P36047	338 aa		5.89	□□□□□ -1.47
UBA3	YPR066W	MAD2	P40958	196 aa		5.89	□□□□□ -1.47
UBA3	YPR066W	ERR3	P42222	437 aa		5.89	□□□□□ -1.47
UBA3	YPR066W	NOP9	P47077	666 aa	Known RBP	5.89	□□□□□ -1.47
UBA3	YPR066W	RPT4	P53549	437 aa	Known RBP	5.89	□□□□□ -1.47
UBA3	YPR066W	NSE5	Q03718	556 aa		5.89	□□□□□ -1.47
UBA3	YPR066W	DIN7	Q12086	430 aa		5.89	□□□□□ -1.47
UBA3	YPR066W	PSF3	Q12146	194 aa		5.89	□□□□□ -1.47
UBA3	YPR066W	RVB2	Q12464	471 aa	Known RBP	5.89	□□□□□ -1.47
UBA3	YPR066W	CAD1	P24813	409 aa	Known RBP	5.88	□□□□□ -1.47
UBA3	YPR066W	LCB1	P25045	558 aa	Known RBP	5.88	□□□□□ -1.47
UBA3	YPR066W	MSH1	P25846	959 aa		5.88	□□□□□ -1.47

Retrieved 100 of 5,963 RNA–protein pairs in 52.4 ms