RNA–Protein interactions for RNA: YPR057W

BRR1, Transcript of snRNP protein component of spliceosomal snRNPs, yeastyeast

Gene BRR1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRR1YPR057W FAR8Q05040 523 aa9.7□□□□□ -0.86
BRR1YPR057W YDL073WQ07454 984 aa9.7□□□□□ -0.86
BRR1YPR057W IMA2Q08295 589 aa9.7□□□□□ -0.86
BRR1YPR057W YLL056CQ12177 298 aa9.7□□□□□ -0.86
BRR1YPR057W ILS1P09436 1072 aaKnown RBP9.69□□□□□ -0.86
BRR1YPR057W SRV2P17555 526 aaKnown RBP9.69□□□□□ -0.86
BRR1YPR057W HMT1P38074 348 aa9.69□□□□□ -0.86
BRR1YPR057W AIM18P38884 321 aa9.69□□□□□ -0.86
BRR1YPR057W SCC4P40090 624 aa9.69□□□□□ -0.86
BRR1YPR057W DSN1P40568 576 aa9.69□□□□□ -0.86
BRR1YPR057W MND2P40577 368 aa9.69□□□□□ -0.86
BRR1YPR057W CDC1P40986 491 aa9.69□□□□□ -0.86
BRR1YPR057W RTA1P53047 317 aa9.69□□□□□ -0.86
BRR1YPR057W CDC10P25342 322 aaKnown RBP9.68□□□□□ -0.86
BRR1YPR057W URA7P28274 579 aaKnown RBP9.68□□□□□ -0.86
BRR1YPR057W MET4P32389 672 aa9.68□□□□□ -0.86
BRR1YPR057W SQT1P35184 431 aa9.68□□□□□ -0.86
BRR1YPR057W SET3P36124 751 aa9.68□□□□□ -0.86
BRR1YPR057W SPC97P38863 823 aa9.68□□□□□ -0.86
BRR1YPR057W TGL3P40308 642 aa9.68□□□□□ -0.86
BRR1YPR057W RAD26P40352 1085 aa9.68□□□□□ -0.86
BRR1YPR057W RRT5P43607 289 aa9.68□□□□□ -0.86
BRR1YPR057W PCL10P53124 433 aa9.68□□□□□ -0.86
BRR1YPR057W NMA111P53920 997 aa9.68□□□□□ -0.86
BRR1YPR057W KTR6P54070 446 aa9.68□□□□□ -0.86
BRR1YPR057W HRD3Q05787 833 aa9.68□□□□□ -0.86
BRR1YPR057W MSD1P15179 658 aaKnown RBP9.67□□□□□ -0.86
BRR1YPR057W ADK2P26364 225 aa9.67□□□□□ -0.86
BRR1YPR057W PEP7P32609 515 aa9.67□□□□□ -0.86
BRR1YPR057W RAD5P32849 1169 aaPredicted RBP9.67□□□□□ -0.86
BRR1YPR057W LOS1P33418 1100 aaPredicted RBP9.67□□□□□ -0.86
BRR1YPR057W FHL1P39521 936 aa9.67□□□□□ -0.86
BRR1YPR057W OPT1P40897 799 aa9.67□□□□□ -0.86
BRR1YPR057W GUF1P46943 645 aa9.67□□□□□ -0.86
BRR1YPR057W TAH11P47112 604 aa9.67□□□□□ -0.86
BRR1YPR057W FOL2P51601 243 aaKnown RBP9.67□□□□□ -0.86
BRR1YPR057W YPR003CP53394 754 aa9.67□□□□□ -0.86
BRR1YPR057W KTR5P53966 522 aaPredicted RBP9.67□□□□□ -0.86
BRR1YPR057W SPP1Q03012 353 aa9.67□□□□□ -0.86
BRR1YPR057W AIM32Q04689 311 aa9.67□□□□□ -0.86
BRR1YPR057W TDA5Q06417 326 aaKnown RBP9.67□□□□□ -0.86
BRR1YPR057W AAD4Q07747 329 aa9.67□□□□□ -0.86
BRR1YPR057W APM4Q99186 491 aa9.67□□□□□ -0.86
BRR1YPR057W PAB1P04147 577 aaKnown RBP RIP-Chip data9.66□□□□□ -0.86 RIP-Chip
BRR1YPR057W KGD2P19262 463 aaPredicted RBP9.66□□□□□ -0.86
BRR1YPR057W RGR1P19263 1082 aa9.66□□□□□ -0.86
BRR1YPR057W CAD1P24813 409 aaKnown RBP9.66□□□□□ -0.86
BRR1YPR057W CDC20P26309 610 aa9.66□□□□□ -0.86
BRR1YPR057W KIP2P28743 706 aa9.66□□□□□ -0.86
BRR1YPR057W VPH1P32563 840 aaKnown RBP9.66□□□□□ -0.86
BRR1YPR057W SMF2P38778 549 aa9.66□□□□□ -0.86
BRR1YPR057W PRM9P39551 298 aa9.66□□□□□ -0.86
BRR1YPR057W STL1P39932 569 aa9.66□□□□□ -0.86
BRR1YPR057W YFL040WP43562 540 aa9.66□□□□□ -0.86
BRR1YPR057W TAF1P46677 1066 aa9.66□□□□□ -0.86
BRR1YPR057W MNN11P46985 422 aaKnown RBP9.66□□□□□ -0.86
BRR1YPR057W VTC4P47075 721 aa9.66□□□□□ -0.86
BRR1YPR057W NUT1P53114 1132 aa9.66□□□□□ -0.86
BRR1YPR057W ADA2Q02336 434 aa9.66□□□□□ -0.86
BRR1YPR057W INA17Q02888 182 aa9.66□□□□□ -0.86
BRR1YPR057W ADE13Q05911 482 aaKnown RBP9.66□□□□□ -0.86
BRR1YPR057W GPM3Q12326 303 aa9.66□□□□□ -0.86
BRR1YPR057W HRT3Q12347 344 aa9.66□□□□□ -0.86
BRR1YPR057W AI5_ALPHAQ9ZZX1 630 aa9.66□□□□□ -0.86
BRR1YPR057W CCP1P00431 361 aa9.65□□□□□ -0.86
BRR1YPR057W ATP1P07251 545 aaKnown RBP9.65□□□□□ -0.86
BRR1YPR057W CLB1P24868 471 aa9.65□□□□□ -0.86
BRR1YPR057W TSR4P25040 408 aa9.65□□□□□ -0.86
BRR1YPR057W BIT2P38346 545 aa9.65□□□□□ -0.86
BRR1YPR057W RIM4P38741 713 aa9.65□□□□□ -0.86
BRR1YPR057W FSH1P38777 243 aaKnown RBP9.65□□□□□ -0.86
BRR1YPR057W YGR127WP53275 312 aa9.65□□□□□ -0.86
BRR1YPR057W VPS9P54787 451 aa9.65□□□□□ -0.86
BRR1YPR057W VHS3Q08438 674 aa9.65□□□□□ -0.86
BRR1YPR057W NRT1Q08485 598 aa9.65□□□□□ -0.86
BRR1YPR057W ARP7Q12406 477 aa9.65□□□□□ -0.86
BRR1YPR057W DSS4P32601 143 aa9.64□□□□□ -0.87
BRR1YPR057W YBR056WP38081 501 aa9.64□□□□□ -0.87
BRR1YPR057W YSW1P38280 609 aa9.64□□□□□ -0.87
BRR1YPR057W RRD1P40454 393 aaKnown RBP9.64□□□□□ -0.87
BRR1YPR057W IML2P47031 731 aa9.64□□□□□ -0.87
BRR1YPR057W LSC1P53598 329 aaKnown RBP9.64□□□□□ -0.87
BRR1YPR057W SLT2Q00772 484 aa9.64□□□□□ -0.87
BRR1YPR057W YMR102CQ03177 834 aa9.64□□□□□ -0.87
BRR1YPR057W YML119WQ03208 357 aa9.64□□□□□ -0.87
BRR1YPR057W SPG3Q04398 127 aaPredicted RBP9.64□□□□□ -0.87
BRR1YPR057W YML083CQ04526 418 aa9.64□□□□□ -0.87
BRR1YPR057W CUE5Q08412 411 aaKnown RBP9.64□□□□□ -0.87
BRR1YPR057W CBC2Q08920 208 aaKnown RBP RIP-Chip data9.64□□□□□ -0.87not detected
BRR1YPR057W LEA1Q08963 238 aaPredicted RBP9.64□□□□□ -0.87
BRR1YPR057W EFG1Q3E705 233 aaKnown RBP9.64□□□□□ -0.87
BRR1YPR057W TEF1P02994 458 aaKnown RBP9.63□□□□□ -0.87
BRR1YPR057W YIH1P25637 258 aa9.63□□□□□ -0.87
BRR1YPR057W AIM26P32858 118 aa9.63□□□□□ -0.87
BRR1YPR057W HSP78P33416 811 aa9.63□□□□□ -0.87
BRR1YPR057W YBR032WP38223 100 aa9.63□□□□□ -0.87
BRR1YPR057W SIF2P38262 535 aa9.63□□□□□ -0.87
BRR1YPR057W YBP1P38315 674 aa9.63□□□□□ -0.87
BRR1YPR057W OTU2P38747 307 aaKnown RBP9.63□□□□□ -0.87
BRR1YPR057W PPE1P38796 400 aa9.63□□□□□ -0.87
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms